Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19b24f
         (756 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   3.1  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   3.1  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    23   3.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.1  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    22   5.4  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    22   5.4  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    22   5.4  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    22   5.4  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   5.4  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   5.4  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   5.4  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   5.4  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   9.4  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   9.4  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   9.4  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   9.4  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 502 TNMRPTVAGATSSSITISRSHL 437
           T   PT   +T++S TIS+ H+
Sbjct: 382 TTASPTTEPSTTTSTTISQKHI 403


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNINNHGGINSR 645
           YSNYN  ++   YN NN+   N +
Sbjct: 324 YSNYNNYNN---YNNNNYNNYNKK 344


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 336 YCQLGKCISIG 368
           YC+L KCI++G
Sbjct: 73  YCRLKKCIAVG 83


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 336 YCQLGKCISIG 368
           YC+L KCI++G
Sbjct: 122 YCRLKKCIAVG 132


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNIN 621
           Y+NYN  +    YNIN
Sbjct: 91  YNNYNNNYKPLYYNIN 106


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNIN 621
           Y+NYN  +    YNIN
Sbjct: 91  YNNYNNNYKPLYYNIN 106


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNIN 621
           Y+NYN  +    YNIN
Sbjct: 91  YNNYNNNYKPLYYNIN 106


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNIN 621
           Y+NYN  +    YNIN
Sbjct: 91  YNNYNNNYKPLYYNIN 106


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNIN 621
           Y+NYN  +    YNIN
Sbjct: 324 YNNYNNNYKPLYYNIN 339


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNIN 621
           Y+NYN  +    YNIN
Sbjct: 324 YNNYNNNYKPLYYNIN 339


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNIN 621
           Y+NYN  +    YNIN
Sbjct: 324 YNNYNNNYKPLYYNIN 339


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNIN 621
           Y+NYN  +    YNIN
Sbjct: 313 YNNYNNNYKPLYYNIN 328


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNINNHGGINSRQ 648
           YSNYN  ++    N NN+   N ++
Sbjct: 91  YSNYNNYNNNYNNNYNNNYNNNYKK 115


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNINNHGGINSRQ 648
           YSNYN  ++    N NN+   N ++
Sbjct: 91  YSNYNNYNNNYNNNYNNNYNNNYKK 115


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 547 HHFSMKSRVYSNYNKLHSTRIYNIN 621
           +++S  +   +NYN  +    YNIN
Sbjct: 89  YNYSNYNNYNNNYNNYNKKLYYNIN 113


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 574 YSNYNKLHSTRIYNIN 621
           Y+NYN  +    YNIN
Sbjct: 324 YNNYNNNYKPLHYNIN 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,096
Number of Sequences: 438
Number of extensions: 4445
Number of successful extensions: 29
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)