Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19b22r
         (422 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022983-4|AAB69944.1|  387|Caenorhabditis elegans Hypothetical ...    29   1.0  
U80029-1|AAB37581.1|  167|Caenorhabditis elegans Hypothetical pr...    27   4.2  

>AF022983-4|AAB69944.1|  387|Caenorhabditis elegans Hypothetical
           protein R13D11.4 protein.
          Length = 387

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = -3

Query: 372 TRIQRITKNTIKISRYYPVYFQLKFIS*WQFH 277
           +R+Q I   ++ +S ++P++F L F+  + FH
Sbjct: 201 SRLQNINITSVCLSPFFPIFFSLLFVCPFLFH 232


>U80029-1|AAB37581.1|  167|Caenorhabditis elegans Hypothetical
           protein T20D4.13 protein.
          Length = 167

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -2

Query: 322 PSIFSIKIYFLMAISLNIW*YCNIVFKFLRDKSF 221
           PS F+I I FL  +S+N     NI+F+ L   +F
Sbjct: 126 PSEFAIHILFLKLVSINQITLINIIFRLLAYYAF 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,480,252
Number of Sequences: 27780
Number of extensions: 152963
Number of successful extensions: 218
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)