Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19b22f
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   4.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   4.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   6.0  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +2

Query: 323 YIFFAHRIWL*PIIYV*SSYCRLVTFAFQASL*VFFFTCFRVTL 454
           Y+FF       PI+Y+  SYC +VT      + + F TC  + L
Sbjct: 145 YVFFVENE---PILYLIFSYCPIVTTGI---IKIQFATCAHLIL 182



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 515 FFIYDSGIAYSNLTDV 468
           ++ YDSG    NLTDV
Sbjct: 252 YYCYDSGFNSDNLTDV 267


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -3

Query: 303 YFNPTARFVKIYFIFRYFNF 244
           + NP  +++ I+FI  +++F
Sbjct: 14  FINPLVKYLNIFFITPWYDF 33


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 693 TSVVGLLTCPRKY 731
           T + GL  CPRKY
Sbjct: 50  TCIEGLRDCPRKY 62


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 693 TSVVGLLTCPRKY 731
           T + GL  CPRKY
Sbjct: 46  TCIEGLRDCPRKY 58


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 128 TLETINHMCTTFGVLFPR 75
           TLET   +C  +G L+P+
Sbjct: 57  TLETCRLVCGKYGALWPQ 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,387
Number of Sequences: 336
Number of extensions: 3505
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)