Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19b22f
         (740 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.     30   7.6  
AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.     30   7.6  
AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.     30   7.6  
AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.     30   7.6  
AK075536-1|BAC11679.1|  529|Homo sapiens protein ( Homo sapiens ...    30   7.6  
AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain p...    30   7.6  
AB208887-1|BAD92124.1| 1379|Homo sapiens laminin, gamma 3 precur...    30   7.6  

>AL583807-2|CAH69984.3| 1575|Homo sapiens laminin, gamma 3 protein.
          Length = 1575

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 151 ERCTKSVQHWKPLITCVQPLECSS 80
           ERC ++  HW P + C QP +C S
Sbjct: 365 ERCQENFYHWDPRMPC-QPCDCQS 387


>AL583807-1|CAH69983.1| 1587|Homo sapiens laminin, gamma 3 protein.
          Length = 1587

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 151 ERCTKSVQHWKPLITCVQPLECSS 80
           ERC ++  HW P + C QP +C S
Sbjct: 365 ERCQENFYHWDPRMPC-QPCDCQS 387


>AL355872-3|CAI39529.1| 1587|Homo sapiens laminin, gamma 3 protein.
          Length = 1587

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 151 ERCTKSVQHWKPLITCVQPLECSS 80
           ERC ++  HW P + C QP +C S
Sbjct: 365 ERCQENFYHWDPRMPC-QPCDCQS 387


>AL355872-2|CAI39530.2| 1619|Homo sapiens laminin, gamma 3 protein.
          Length = 1619

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 151 ERCTKSVQHWKPLITCVQPLECSS 80
           ERC ++  HW P + C QP +C S
Sbjct: 409 ERCQENFYHWDPRMPC-QPCDCQS 431


>AK075536-1|BAC11679.1|  529|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0236 fis, clone HEMBA1007104, highly similar to
           Laminin gamma-3 chain precursor. ).
          Length = 529

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 151 ERCTKSVQHWKPLITCVQPLECSS 80
           ERC ++  HW P + C QP +C S
Sbjct: 365 ERCQENFYHWDPRMPC-QPCDCQS 387


>AF041835-1|AAD36991.1| 1587|Homo sapiens laminin gamma 3 chain
           precursor protein.
          Length = 1587

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 151 ERCTKSVQHWKPLITCVQPLECSS 80
           ERC ++  HW P + C QP +C S
Sbjct: 365 ERCQENFYHWDPRMPC-QPCDCQS 387


>AB208887-1|BAD92124.1| 1379|Homo sapiens laminin, gamma 3 precursor
           variant protein.
          Length = 1379

 Score = 30.3 bits (65), Expect = 7.6
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 151 ERCTKSVQHWKPLITCVQPLECSS 80
           ERC ++  HW P + C QP +C S
Sbjct: 169 ERCQENFYHWDPRMPC-QPCDCQS 191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,331,594
Number of Sequences: 237096
Number of extensions: 1776429
Number of successful extensions: 4145
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4145
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)