Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19b20r
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 54 2e-07
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 48 7e-06
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 42 8e-04
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 38 0.013
AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical ... 31 0.83
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 29 4.4
Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical pr... 29 5.9
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 53.6 bits (123), Expect = 2e-07
Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 17/256 (6%)
Frame = -1
Query: 726 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTL 547
RI+GG++ + GA+ +A LV NG+ +CGA+++ + VTAAHC Q R F
Sbjct: 37 RIIGGNSIDDGAN-WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC--ALQLQTRSFVY 93
Query: 546 AFGTANIFSGGTRVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQRINLA---SXX 376
N + + ++H YN +ND+A++ + I+ + L S
Sbjct: 94 VREPKN--NRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLSKLGIKPVCLVHDDSKL 151
Query: 375 XXXXXXXXXXXXXGRTSDAASG----ANNQQKRQVSLQVITNAVCARTYG-----NSVII 223
+ +SG N+Q + S+ +I++ C +T+ + I
Sbjct: 152 LKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKIT 211
Query: 222 GSTLCVSGANGRSTCXXXXXXXXXXXXXXGRQL-IGITSFGSD--RGC--QRGYPAGFAR 58
G +C +GA T G + IGITS+G+D G Q +P + R
Sbjct: 212 GYQIC-AGAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTR 270
Query: 57 VTSFNSWIRARI*MTT 10
++ + WI+ I T+
Sbjct: 271 ISKYVPWIQGVIGKTS 286
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 48.4 bits (110), Expect = 7e-06
Identities = 55/237 (23%), Positives = 100/237 (42%), Gaps = 6/237 (2%)
Frame = -1
Query: 726 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRNAQARQFTL 547
R++GGS ++ + P L+ L + R CG SL+ +TAAHC+ ++ + +++
Sbjct: 57 RLIGGSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTAAHCF-AKDRRPTSYSV 112
Query: 546 AFGTANIFSGGTRVTTSSVHLHGSYNMNNLNN-DVAIIN-HNHVGFNNNIQRINLASXXX 373
G SG T +V +H YN+ ++ D AI+ H V + + I L S
Sbjct: 113 RVGGHRSGSGSPHRVT-AVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLPA 171
Query: 372 XXXXXXXXXXXXGRTSDAASGANNQQKRQVSLQVITNAVCAR--TYGNSVIIGSTLCVSG 199
++ S + R++ + +++ C+ Y + + S LC
Sbjct: 172 VENRLCVVTGWG--STIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGY 229
Query: 198 ANGR-STCXXXXXXXXXXXXXXGRQLIGITSFGSDRGCQR-GYPAGFARVTSFNSWI 34
+ G+ +C +L G+ S+G GC R G P + V S ++WI
Sbjct: 230 SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGI--GCARPGMPGVYGNVHSASTWI 284
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 41.5 bits (93), Expect = 8e-04
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = -1
Query: 726 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW-RTRNAQARQFT 550
R+VGG GA P A L T CGAS+L T +TAAHC+ + +
Sbjct: 26 RVVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAAHCFEEDERVSSYEVV 83
Query: 549 LAFGTANIFSGGTRV-TTSSVHLHGSYNMNNLNNDVAIINHNHVG--FNNNIQRINLAS 382
+ N G ++ +H + Y + ++D+AI+ + G FN Q I L S
Sbjct: 84 VGDWDNNQTDGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 37.5 bits (83), Expect = 0.013
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = -1
Query: 729 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 586
T I+ G +AN+ LA ++ +G T++CG L+ + +T+AHC
Sbjct: 15 TSIINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62
>AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical
protein Y44A6D.3 protein.
Length = 229
Score = 31.5 bits (68), Expect = 0.83
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 522 SGGTRVTTSSVHLHGSYNMNNLNNDVAIINHNHVGFNNNIQ 400
+ R+ S H G +NN+NN+ NHNH NNNIQ
Sbjct: 68 AAAARLNAQSSHSSGPARLNNMNNN-NNNNHNH-SKNNNIQ 106
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = -1
Query: 711 SAANAGAHPHLAGLVIAL-TNGRTS----ICGASLLTNTRSVTAAHCWR 580
+A N G HLA + + R ICG +L+T +TAAHC++
Sbjct: 32 AAGNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCFQ 80
>Z99278-4|CAB16492.1| 871|Caenorhabditis elegans Hypothetical
protein Y53C12B.3b protein.
Length = 871
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 666 SQVQQDGGEHQRWRQNHPQSWYRRSQRLPRRV*DSQPGGY 785
SQ + DG +HQ + PQ Y + + + + P GY
Sbjct: 355 SQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394
>Z99278-3|CAB16493.1| 867|Caenorhabditis elegans Hypothetical
protein Y53C12B.3a protein.
Length = 867
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 666 SQVQQDGGEHQRWRQNHPQSWYRRSQRLPRRV*DSQPGGY 785
SQ + DG +HQ + PQ Y + + + + P GY
Sbjct: 355 SQNEDDGQQHQHQNEQQPQQGYHQQDFVSNPLWNQMPVGY 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.135 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,284,020
Number of Sequences: 27780
Number of extensions: 270420
Number of successful extensions: 917
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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