Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19a20r
(860 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118478-1|AAM49847.1| 214|Drosophila melanogaster GM16226p pro... 50 4e-06
AE014134-2965|AAF53695.1| 214|Drosophila melanogaster CG10343-P... 50 4e-06
AM294843-1|CAL26829.1| 217|Drosophila melanogaster CG18553 prot... 32 1.2
AM294842-1|CAL26828.1| 217|Drosophila melanogaster CG18553 prot... 32 1.2
AM294840-1|CAL26826.1| 217|Drosophila melanogaster CG18553 prot... 32 1.2
AM294839-1|CAL26825.1| 217|Drosophila melanogaster CG18553 prot... 32 1.2
AM294838-1|CAL26824.1| 217|Drosophila melanogaster CG18553 prot... 32 1.2
AM294837-1|CAL26823.1| 217|Drosophila melanogaster CG18553 prot... 32 1.2
AM294836-1|CAL26822.1| 217|Drosophila melanogaster CG18553 prot... 32 1.2
AM294835-1|CAL26821.1| 217|Drosophila melanogaster CG18553 prot... 32 1.2
AM294834-1|CAL26820.1| 217|Drosophila melanogaster CG18553 prot... 31 1.5
BT025085-1|ABE73256.1| 736|Drosophila melanogaster IP14110p pro... 30 3.6
AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-P... 30 3.6
AM294844-1|CAL26830.1| 217|Drosophila melanogaster CG18553 prot... 29 6.2
AM294841-1|CAL26827.1| 217|Drosophila melanogaster CG18553 prot... 29 6.2
>AY118478-1|AAM49847.1| 214|Drosophila melanogaster GM16226p
protein.
Length = 214
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -1
Query: 794 AQKRRAWDKAELGKGGEKPRGWDWVDIVKHLSQ 696
AQKRR W++ + G++ RGWDWVD+VKHLSQ
Sbjct: 157 AQKRRQWERTD--HKGDRERGWDWVDLVKHLSQ 187
>AE014134-2965|AAF53695.1| 214|Drosophila melanogaster CG10343-PA
protein.
Length = 214
Score = 50.0 bits (114), Expect = 4e-06
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = -1
Query: 794 AQKRRAWDKAELGKGGEKPRGWDWVDIVKHLSQ 696
AQKRR W++ + G++ RGWDWVD+VKHLSQ
Sbjct: 157 AQKRRQWERTD--HKGDRERGWDWVDLVKHLSQ 187
>AM294843-1|CAL26829.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ SCHC SF +++ SF YS
Sbjct: 185 RTFFYSPASSCHCSSFVLGSHADSVSFIYS 214
>AM294842-1|CAL26828.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ SCHC SF +++ SF YS
Sbjct: 185 RTFFYSPASSCHCSSFVLGSHADSVSFIYS 214
>AM294840-1|CAL26826.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ SCHC SF +++ SF YS
Sbjct: 185 RTFFYSPASSCHCSSFVLGSHADSVSFIYS 214
>AM294839-1|CAL26825.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ SCHC SF +++ SF YS
Sbjct: 185 RTFFYSPASSCHCSSFVLGSHADSVSFIYS 214
>AM294838-1|CAL26824.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ SCHC SF +++ SF YS
Sbjct: 185 RTFFYSPASSCHCSSFVLGSHADSVSFIYS 214
>AM294837-1|CAL26823.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ SCHC SF +++ SF YS
Sbjct: 185 RTFFYSPASSCHCSSFVLGSHADSVSFIYS 214
>AM294836-1|CAL26822.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ SCHC SF +++ SF YS
Sbjct: 185 RTFFYSPASSCHCSSFVLGSHADSVSFIYS 214
>AM294835-1|CAL26821.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ SCHC SF +++ SF YS
Sbjct: 185 RTFFYSPASSCHCSSFVLGSHADSVSFIYS 214
>AM294834-1|CAL26820.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ SCHC SF +++ SF YS
Sbjct: 185 RTFFYSPASSCHCSSFVVGSHADSVSFIYS 214
>BT025085-1|ABE73256.1| 736|Drosophila melanogaster IP14110p
protein.
Length = 736
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 143 VVAPLVLRGDAVMS-LSEFYVHRL*QYFFILLL 48
VV L D +M L+EFY H L Q F+++LL
Sbjct: 396 VVCSTTLHADTIMDFLNEFYAHPLLQDFYVVLL 428
>AE013599-1072|AAF58808.1| 1698|Drosophila melanogaster CG12904-PA
protein.
Length = 1698
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 143 VVAPLVLRGDAVMS-LSEFYVHRL*QYFFILLL 48
VV L D +M L+EFY H L Q F+++LL
Sbjct: 194 VVCSTTLHADTIMDFLNEFYAHPLLQDFYVVLL 226
>AM294844-1|CAL26830.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 6.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ CHC SF +++ SF YS
Sbjct: 185 RTFFYSLASYCHCSSFVLGSHADSVSFIYS 214
>AM294841-1|CAL26827.1| 217|Drosophila melanogaster CG18553
protein.
Length = 217
Score = 29.5 bits (63), Expect = 6.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 136 RHLYYAATLSCHCRSFTFTDYSNIFSFCYS 47
R +Y+ CHC SF +++ SF YS
Sbjct: 185 RTFFYSLASYCHCSSFVLGSHADSVSFIYS 214
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,417,133
Number of Sequences: 53049
Number of extensions: 557383
Number of successful extensions: 1035
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -