Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19a20f
         (706 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC107432-1|AAI07433.1|  188|Homo sapiens RWD domain containing 4...    91   4e-18
BC067752-1|AAH67752.1|  188|Homo sapiens RWD domain containing 4...    91   4e-18
BC017472-1|AAH17472.1|  188|Homo sapiens RWD domain containing 4...    90   6e-18
BC015802-1|AAH15802.1|  243|Homo sapiens RWD domain containing 1...    51   4e-06
AL121953-5|CAC14427.1|  243|Homo sapiens RWD domain containing 1...    51   4e-06
AF132958-1|AAD27733.1|  241|Homo sapiens CGI-24 protein protein.       51   4e-06
AC093081-1|AAQ96848.1|  125|Homo sapiens unknown protein.              42   0.002

>BC107432-1|AAI07433.1|  188|Homo sapiens RWD domain containing 4A
           protein.
          Length = 188

 Score = 91.1 bits (216), Expect = 4e-18
 Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
 Frame = +2

Query: 233 EQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKYMD-GD-KSFILEISWGLKYPTEKPSFNL 406
           E Q  E+E L+SIYEGD++F+++   ++QY+  + GD K+F++EISW   YP   P  ++
Sbjct: 5   EDQEMELEALRSIYEGDESFRELSPVSFQYRIGENGDPKAFLIEISWTETYPQTPPILSM 64

Query: 407 EIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEILAGQVEEVVSTRV 586
             F+N  + + VK++IL+ L    E  LG AMTYTLFE  ++   + +        +T +
Sbjct: 65  NAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKDNKEQFMENHNPINSATSI 124

Query: 587 EKIV---IDDQXXXXXXXXXXXXXXXAQKRRAWDKAE 688
             I+     +                AQKR+  DK +
Sbjct: 125 SNIISIETPNTAPSSKKKDKKEQLSKAQKRKLADKTD 161


>BC067752-1|AAH67752.1|  188|Homo sapiens RWD domain containing 4A
           protein.
          Length = 188

 Score = 91.1 bits (216), Expect = 4e-18
 Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
 Frame = +2

Query: 233 EQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKYMD-GD-KSFILEISWGLKYPTEKPSFNL 406
           E Q  E+E L+SIYEGD++F+++   ++QY+  + GD K+F++EISW   YP   P  ++
Sbjct: 5   EDQEMELEALRSIYEGDESFRELSPVSFQYRIGENGDPKAFLIEISWTETYPQTPPILSM 64

Query: 407 EIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEILAGQVEEVVSTRV 586
             F+N  + + VK++IL+ L    E  LG AMTYTLFE  ++   + +        +T +
Sbjct: 65  NAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKDNKEQFMENHNPINSATSI 124

Query: 587 EKIV---IDDQXXXXXXXXXXXXXXXAQKRRAWDKAE 688
             I+     +                AQKR+  DK +
Sbjct: 125 SNIISIETPNTAPSSKKKDKKEQLSKAQKRKLADKTD 161


>BC017472-1|AAH17472.1|  188|Homo sapiens RWD domain containing 4A
           protein.
          Length = 188

 Score = 90.2 bits (214), Expect = 6e-18
 Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
 Frame = +2

Query: 233 EQQAEEIEVLKSIYEGDDNFKQVDAKTYQYKYMD-GD-KSFILEISWGLKYPTEKPSFNL 406
           E Q  E+E L+SIYEGD++F+++   ++QY+  + GD K+F++EISW   YP   P  ++
Sbjct: 5   EDQEMELEALRSIYEGDESFRELSPVSFQYRIGENGDPKAFLIEISWTETYPQTPPILSM 64

Query: 407 EIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEILAGQ--VEEVVS- 577
             F+N  + + VK++IL+ L    E  LG AMTYTLFE  ++   + +     +    S 
Sbjct: 65  NAFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTLFEYAKDNKEQFMENHNPINSATSL 124

Query: 578 TRVEKIVIDDQXXXXXXXXXXXXXXXAQKRRAWDKAE 688
           + +  I   +                AQKR+  DK +
Sbjct: 125 SNIISIETPNTAPSSKKKDKKEQLSKAQKRKLADKTD 161


>BC015802-1|AAH15802.1|  243|Homo sapiens RWD domain containing 1
           protein.
          Length = 243

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
 Frame = +2

Query: 218 MSDEAEQQAEEIEVLKSIYEGDDNFKQVDAK------TYQYKYMDGDKSF--ILEISWGL 373
           M+D  E+Q  E+E L+SIY   D+F  +         T   +  + D++    L+ ++  
Sbjct: 1   MTDYGEEQRNELEALESIYP--DSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSE 58

Query: 374 KYPTEKPSFNLEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 550
           KYP E P +  EIF  ++L      +IL +L  +AE+ LG  M +TL   ++E+++EI+
Sbjct: 59  KYPDEAPLY--EIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIV 115


>AL121953-5|CAC14427.1|  243|Homo sapiens RWD domain containing 1
           protein.
          Length = 243

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
 Frame = +2

Query: 218 MSDEAEQQAEEIEVLKSIYEGDDNFKQVDAK------TYQYKYMDGDKSF--ILEISWGL 373
           M+D  E+Q  E+E L+SIY   D+F  +         T   +  + D++    L+ ++  
Sbjct: 1   MTDYGEEQRNELEALESIYP--DSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSE 58

Query: 374 KYPTEKPSFNLEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 550
           KYP E P +  EIF  ++L      +IL +L  +AE+ LG  M +TL   ++E+++EI+
Sbjct: 59  KYPDEAPLY--EIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIV 115


>AF132958-1|AAD27733.1|  241|Homo sapiens CGI-24 protein protein.
          Length = 241

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
 Frame = +2

Query: 218 MSDEAEQQAEEIEVLKSIYEGDDNFKQVDAK------TYQYKYMDGDKSF--ILEISWGL 373
           M+D  E+Q  E+E L+SIY   D+F  +         T   +  + D++    L+ ++  
Sbjct: 1   MTDYGEEQRNELEALESIYP--DSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSE 58

Query: 374 KYPTEKPSFNLEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEIL 550
           KYP E P +  EIF  ++L      +IL +L  +AE+ LG  M +TL   ++E+++EI+
Sbjct: 59  KYPDEAPLY--EIFSQENLEDNDVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIV 115


>AC093081-1|AAQ96848.1|  125|Homo sapiens unknown protein.
          Length = 125

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
 Frame = +2

Query: 404 LEIFYNQHLLATVKENILSILNTEAEQWLGCAMTYTLFECLRERVSEILAGQVEEVVSTR 583
           +  F+N  + + VK++IL+ L   AE  LG AMTYTLFE  ++   + +        +T 
Sbjct: 1   MNAFFNNTISSAVKQSILAKLQEAAEANLGTAMTYTLFEYAKDNKEQFMENHNPINSATS 60

Query: 584 VEKIV---IDDQXXXXXXXXXXXXXXXAQKRRAWDKAE 688
           +  I+     +                AQKR+  DK +
Sbjct: 61  ISNIISIETPNTAPSSKKKDKKEQLSKAQKRKLADKTD 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,829,601
Number of Sequences: 237096
Number of extensions: 1652669
Number of successful extensions: 2994
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2988
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)