Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19a19r
         (835 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    31   0.013
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.28 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.65 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   1.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   2.0  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   6.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.1  

>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 31.1 bits (67), Expect = 0.013
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -3

Query: 722 NRGTVVIVHGWNNNGNT-PDEPSHQIRLPCRSRREC 618
           +RG V I+ GW  NG   P +  HQ+ L  RS   C
Sbjct: 117 HRGLVSIIDGWELNGEVFPSKMDHQLPLKQRSSEFC 152


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 26.6 bits (56), Expect = 0.28
 Identities = 12/45 (26%), Positives = 26/45 (57%)
 Frame = -2

Query: 801  TRQNQNNRQGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPR 667
            T+Q Q  +Q   ++Q Q +++   P+Q + +  + + +QQ Q P+
Sbjct: 1500 TQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQ 1544



 Score = 24.2 bits (50), Expect = 1.5
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -1

Query: 763 TATSTP*GIHTT-APTEVPLSSSTDGTTMATP 671
           T  STP  + TT A T +P +S+T GT  ATP
Sbjct: 211 TDASTPATVTTTGATTTLPAASAT-GTGPATP 241


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 25.4 bits (53), Expect = 0.65
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 791 TKTIARVLVNGNINSVRNSHYRANRGTVVIVHGW 690
           T  IAR+L       +  S YR   GTVV++H W
Sbjct: 395 TTCIARILDE----PIELSGYRLTAGTVVLLHTW 424


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -1

Query: 181 SVRTNHLVGRRCGNIWEAELSNCNGGTLHMGNGNFGKRGSG 59
           ++ + H +  +C  +  +E  NCN G+L +   NF  +  G
Sbjct: 73  TITSYHRINLKCSLVEFSENKNCNAGSLTV-KKNFANKYCG 112


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 725 ANRGTVVIVHGWNNNGNTPDEPSHQI 648
           ++ G   +   W++N  TPD+P  QI
Sbjct: 396 SSTGLAQVTGIWHSNLTTPDDPDIQI 421


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 376 WGGNSNALNRNAGHYVECI 320
           + GN N  + N   YVEC+
Sbjct: 48  YNGNVNVEDENVQSYVECM 66


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 19  FRKARRCEFSNRRGRIR 69
           F+   RC+ SN+R R R
Sbjct: 74  FKSLPRCQLSNKRDRSR 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,821
Number of Sequences: 438
Number of extensions: 7135
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)