Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19a19f
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.68
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 31 0.89
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.2
X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein. 31 1.2
AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical ... 31 1.2
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 30 1.6
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 30 1.6
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 30 1.6
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 30 1.6
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z14092-2|CAA78469.2| 307|Caenorhabditis elegans Hypothetical pr... 30 2.1
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 29 2.7
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 29 2.7
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 29 2.7
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 2.7
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 29 2.7
Z83239-2|CAB05802.1| 182|Caenorhabditis elegans Hypothetical pr... 29 3.6
U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical pr... 29 3.6
AC006621-1|AAK68261.2| 545|Caenorhabditis elegans Hypothetical ... 29 3.6
AF016437-3|AAB65885.2| 405|Caenorhabditis elegans Hypothetical ... 29 4.8
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 28 6.3
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical p... 28 8.3
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 8.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 8.3
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical ... 28 8.3
AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF tra... 28 8.3
>L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical
protein C13G5.2 protein.
Length = 351
Score = 33.1 bits (72), Expect = 0.22
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 644 LDPAGPQWGGNSNALNRNAGHYVECIHTDGRALGIFN 754
L+P+G + G AL+RNA HYV I T GR+ I N
Sbjct: 100 LEPSGHGFRGGIAALSRNASHYV--ISTVGRSSNILN 134
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 31.5 bits (68), Expect = 0.68
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +3
Query: 171 TCMNPSTMNYWAPEAAPIISTGFS--PDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSS 344
T P+T P +T + P T T T T+TP TTA T +++
Sbjct: 243 TTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKT-TKSTTT 301
Query: 345 TDGTTMATPR*TLSSDPPSLPFKT*MSSLLTGT 443
T TT T T ++ P PF T +++ T
Sbjct: 302 TTKTTKTTSTPTTTTTTPKTPFDTSKCTVMCST 334
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Frame = +3
Query: 252 TKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*MSSL 431
T T T T+T TT PT +++T TT TP T ++ P + +T ++
Sbjct: 202 TPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTP--TTTTTPATTTSETTTTTP 259
Query: 432 LTGTDLLIQ---TTILPPLASRMSVAPSATFWFGSSTMLEAIGTK 557
T T + TT P + P+ T +T TK
Sbjct: 260 TTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTK 304
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Frame = +3
Query: 228 STGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGT-TMATPR*TLSSDPPSL 404
+T +P T T T+TP TT PT +++T T T TP T + +
Sbjct: 73 TTTTTPTTPTTTTTTPTTTTTTP-TTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTTT 131
Query: 405 PFKT*MSSLLTGTDLLIQTTILPPLASRMSVAPSAT 512
P T + T T +TT P + + T
Sbjct: 132 PTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTT 167
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/74 (29%), Positives = 30/74 (40%)
Frame = +3
Query: 243 PDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSLPFKT*M 422
P T T T T+TP TT T +++T TT TP T ++ + P T
Sbjct: 217 PTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTP--TTTTQTTTKPTTTTT 274
Query: 423 SSLLTGTDLLIQTT 464
+ T T TT
Sbjct: 275 TPTTTPTTTTTPTT 288
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +3
Query: 306 HTTAPTEVPLSSSTDGTTMATPR*T--LSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPL 479
HTT PT+ P + T TT T R T ++S + P +T + + T T T PP
Sbjct: 277 HTTPPTQTP-PTQTPPTTTTTRRVTVVVTSPTTTTPRRTITTRIWTTTTTQAPPTEAPPT 335
Query: 480 ASRMSVAPSATFW 518
+ + + T W
Sbjct: 336 EAPPTTQTTPTSW 348
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/67 (32%), Positives = 27/67 (40%)
Frame = -2
Query: 672 PPHCGPAGSKPVTRAGRPPAWRPALPTT*APKLKPIRCTWFQLPPALLMSQTKKLPRARP 493
PP A P T+A PP + TT AP KP T P + T K+ +P
Sbjct: 192 PPPTTKAPPPPTTKAPPPPTTNKEV-TTVAPVPKPAPVTAPAPNPPAPENTTAKVETTKP 250
Query: 492 TSGTPAA 472
T P A
Sbjct: 251 TKAAPPA 257
>X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein.
Length = 557
Score = 30.7 bits (66), Expect = 1.2
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Frame = +2
Query: 284 NINSVRN--SHYRANRGTVVIVHGWNNN--GNTQMNPLIRSAFLAVQDVNVIVVDWHRLA 451
N+ + RN S ++ R +V +HG ++ S L ++DV V+ +++ RL
Sbjct: 102 NVFTPRNASSEFKNGRPVMVYIHGGGYELCASSDFCAYSLSGTLPLKDVVVVSINY-RLG 160
Query: 452 NSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGRPA 631
+ T V GNF +W W Q H+ F + V G+ AGG
Sbjct: 161 VFGFLTTGDNV-----CPGNFGLW-DQTLALKWVQKHISSFGGDPNCVTVFGQSAGGAST 214
Query: 632 RVTGLDP 652
+ L P
Sbjct: 215 DLLSLSP 221
>AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical
protein F13H6.3 protein.
Length = 554
Score = 30.7 bits (66), Expect = 1.2
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Frame = +2
Query: 284 NINSVRN--SHYRANRGTVVIVHGWNNN--GNTQMNPLIRSAFLAVQDVNVIVVDWHRLA 451
N+ + RN S ++ R +V +HG ++ S L ++DV V+ +++ RL
Sbjct: 102 NVFTPRNASSEFKNGRPVMVYIHGGGYELCASSDFCAYSLSGTLPLKDVVVVSINY-RLG 160
Query: 452 NSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGRPA 631
+ T V GNF +W W Q H+ F + V G+ AGG
Sbjct: 161 VFGFLTTGDNV-----CPGNFGLW-DQTLALKWVQKHISSFGGDPNCVTVFGQSAGGAST 214
Query: 632 RVTGLDP 652
+ L P
Sbjct: 215 DLLSLSP 221
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = +1
Query: 253 PKQSP-GACERQHQLREEFTLP-----RQPRYRCHRPRMEQQWQHPDE 378
P+Q+P GA ++++Q + + +P +QPRY+ P +QQ Q P +
Sbjct: 351 PQQAPQGAYQQRYQQPQVYMMPPQGQQQQPRYQGPPPPQQQQQQQPQQ 398
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = +1
Query: 253 PKQSP-GACERQHQLREEFTLP-----RQPRYRCHRPRMEQQWQHPDE 378
P+Q+P GA ++++Q + + +P +QPRY+ P +QQ Q P +
Sbjct: 676 PQQAPQGAYQQRYQQPQVYMMPPQGQQQQPRYQGPPPPQQQQQQQPQQ 723
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 641 GLDPAGPQWGGNSNALNRNAGHYVECIHT 727
G DP P+ G N + R+ H EC+ T
Sbjct: 448 GCDPKNPKCGANEACVQRHGQHNCECVET 476
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 641 GLDPAGPQWGGNSNALNRNAGHYVECIHT 727
G DP P+ G N + R+ H EC+ T
Sbjct: 1032 GCDPKNPKCGANEACVQRHGQHNCECVET 1060
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 641 GLDPAGPQWGGNSNALNRNAGHYVECIHT 727
G DP P+ G N + R+ H EC+ T
Sbjct: 448 GCDPKNPKCGANEACVQRHGQHNCECVET 476
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 641 GLDPAGPQWGGNSNALNRNAGHYVECIHT 727
G DP P+ G N + R+ H EC+ T
Sbjct: 1032 GCDPKNPKCGANEACVQRHGQHNCECVET 1060
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 6/48 (12%)
Frame = +1
Query: 253 PKQSP-GACERQHQLREEFTLP-----RQPRYRCHRPRMEQQWQHPDE 378
P+Q+P GA ++++Q + + +P +QPRY+ P +QQ Q P +
Sbjct: 676 PQQAPQGAYQQRYQQPQVYMMPPQGQQQQPRYQGPPPPQQQQQQQPQQ 723
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 641 GLDPAGPQWGGNSNALNRNAGHYVECIHT 727
G DP P+ G N + R+ H EC+ T
Sbjct: 1032 GCDPKNPKCGANEACVQRHGQHNCECVET 1060
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +3
Query: 207 PEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVP--LSSSTDGTTMATPR*T 380
P ST + T T T TST TT PT +++T TT ATP T
Sbjct: 65 PTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTT 124
Query: 381 LSSDPPSLP 407
++ PP P
Sbjct: 125 TTTMPPCNP 133
>Z14092-2|CAA78469.2| 307|Caenorhabditis elegans Hypothetical
protein R107.2 protein.
Length = 307
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 500 ALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQA 616
+LG FL W N G +W H + +V AGR+A
Sbjct: 229 SLGLFLYWAKKNLGDDWTSAHHEAGIASSWLVRTAGRRA 267
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
C37C3.6c protein.
Length = 1487
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 301 EFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHRC 432
E QP+ + + + +QQ Q P +P + CRSR++ C
Sbjct: 1237 EIQSAEQPQPQQPQQQQQQQQQQPQQPRQSMEDICRSRQDAGPC 1280
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
C37C3.6a protein.
Length = 1558
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 301 EFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHRC 432
E QP+ + + + +QQ Q P +P + CRSR++ C
Sbjct: 1237 EIQSAEQPQPQQPQQQQQQQQQQPQQPRQSMEDICRSRQDAGPC 1280
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
C37C3.6b protein.
Length = 2167
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 301 EFTLPRQPRYRCHRPRMEQQWQHPDEPSHQIRLPCRSRRECHRC 432
E QP+ + + + +QQ Q P +P + CRSR++ C
Sbjct: 1237 EIQSAEQPQPQQPQQQQQQQQQQPQQPRQSMEDICRSRQDAGPC 1280
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 29.5 bits (63), Expect = 2.7
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = +3
Query: 228 STGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR*TLSSDPPSLP 407
ST S D T T + T+T + TT T S+STD TT + P L PSLP
Sbjct: 241 STSTSTDSTTTESTS--TSTDSTTTESTTESTTESTSTSTDSTTTSLPALPLILLQPSLP 298
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 288 STP*GIHTTAPTEVPLSSSTDGTTMAT 368
S P I T T +P +SST GTTM T
Sbjct: 438 SLPTPIEITTSTVIPATSSTSGTTMTT 464
>Z83239-2|CAB05802.1| 182|Caenorhabditis elegans Hypothetical
protein T09F5.2 protein.
Length = 182
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 597 PTT*APKLKPIRCTWFQLPPALLMSQTKKLPRARPTSGTPAAAVL 463
P++ +P T +LPP + T + R+ P++ TPA +L
Sbjct: 101 PSSISPAPDKTEPTSSELPPTITKELTAAISRSEPSTSTPAPTIL 145
>U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical
protein K11G9.1 protein.
Length = 565
Score = 29.1 bits (62), Expect = 3.6
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Frame = +2
Query: 275 VNGNINSVRNSHYRANRGTVVIVHG--WNNNGNTQMNPLIRSAFLAVQDVNVIVVDWHRL 448
VN + +S Y+ R +V VHG + + + + S+ L ++DV ++ +++ RL
Sbjct: 102 VNVFVPGWESSEYKNARPVMVYVHGGGFEISSSREFCDYSISSTLPMKDVILVTMNY-RL 160
Query: 449 ANSNYNTAAAGVPDVGRALGNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGRP 628
+ T V GNF +W W Q H+ F + V G+ AGG
Sbjct: 161 GILGFFTTGDEV-----CPGNFGLW-DQTLALQWVQKHIASFGGDPNNVTLFGQSAGGAC 214
Query: 629 ARVTGLDP 652
+ L P
Sbjct: 215 VDLLTLSP 222
>AC006621-1|AAK68261.2| 545|Caenorhabditis elegans Hypothetical
protein C52A10.1 protein.
Length = 545
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Frame = +2
Query: 446 LANSNYNTAAAGVPDVGRAL--GNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAG 619
+ +NY G G + GN+ +W W Q H+ F ++V G AG
Sbjct: 153 VVTANYRVGPLGFMTTGDEVSRGNYGLW-DQTLALKWVQEHIKSFGGNPNIVTVCGTSAG 211
Query: 620 GRPARVTGLDP 652
G A + L P
Sbjct: 212 GVSAGLLALSP 222
>AF016437-3|AAB65885.2| 405|Caenorhabditis elegans Hypothetical
protein F13H6.4 protein.
Length = 405
Score = 28.7 bits (61), Expect = 4.8
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Frame = +2
Query: 332 VVIVHG--WNNNGNTQMNPLIRSAFLAVQDVNVIVVDWHRLANSNYNTAAAGVPDVGRAL 505
+V +HG + G+ S L ++DV V+ +++ RL + T V +
Sbjct: 1 MVFIHGGGFEFGGSADYCDYSLSGTLPLKDVVVVSINY-RLGVFGFLTTGDSVCN----- 54
Query: 506 GNFLVWLINNAGGNWNQVHLIGFSLGAHVVGNAGRQAGGRPARVTGLDP 652
GNF +W W Q H+ F + V G+ AGG + L P
Sbjct: 55 GNFGLW-DQTLALKWVQKHISSFGGDPNCVTVFGQSAGGASTDLLSLSP 102
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 28.3 bits (60), Expect = 6.3
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Frame = +3
Query: 168 WTCMNPSTMNYWAPEAA--PIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSS 341
+TC + +T++ + P +T T T T T+TP TT T S+
Sbjct: 243 YTCASTTTVSTTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTEST 302
Query: 342 STDGTTMATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPLASRMSVAPSAT 512
+T+ T+ TP T ++ P+ T ++ T + T P + + P+ T
Sbjct: 303 TTETTSTTTP--TTTTTAPTTT-TTASTTTFKTTTITTTTQTTTPTTTATTTKPTTT 356
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 28.3 bits (60), Expect = 6.3
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Frame = +3
Query: 156 FRS*WTCMNP--STMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEV 329
+R+ +T M P S E + +T +P T T T TST TT P ++
Sbjct: 260 YRATFTTMKPRKSQKPEKKKEVFNVFTTKTNPQITTTTMTTT-TRTSTAIPTTTTTPRQI 318
Query: 330 PLSSSTDGTTMATPR*TLSSDPPSLPFKT*MSSLLTGTDLLIQTTIL 470
L + TT P + P ++P + SS L+ ++ IL
Sbjct: 319 SLQTIPFSTTTRQPNFDKTKTPATMPSAS--SSSLSSIQTVVDPIIL 363
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 8.3
Identities = 24/75 (32%), Positives = 29/75 (38%)
Frame = +3
Query: 186 STMNYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMA 365
ST+NY AP I + T T T P HTT P + +S T TT
Sbjct: 118 STLNYGAPVDTTTIRNVYPLPVTTT-------ETQAP-PHHTTKPYQYHYTSPTTTTTKR 169
Query: 366 TPR*TLSSDPPSLPF 410
P T + DP F
Sbjct: 170 PPTTTTTEDPQPFEF 184
>Z81081-4|CAB03092.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 618 VVAPHALQVWTPPDHS 665
+++PHA++V TPP HS
Sbjct: 315 LISPHAIRVTTPPKHS 330
>Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical
protein F54B11.11 protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 219 PIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATP 371
PI+ST + TKT+ T+ + TTA T P +S TT TP
Sbjct: 474 PILST-MTSSTTKTLTSTTTITTTKANILTTTATTTTPPVTSAPATTFITP 523
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 8.3
Identities = 27/106 (25%), Positives = 42/106 (39%)
Frame = +3
Query: 195 NYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR 374
N P AP+ T + T + T T + TT PT ++T TT T
Sbjct: 645 NLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPT-----TTTSTTTTTTTT 699
Query: 375 *TLSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPLASRMSVAPSAT 512
T + P+ P T S++ T + Q P A++ + P+ T
Sbjct: 700 TTTTQTTPTTPVVTTPSTITPTTRPVTQPASQP--ATQPATTPTTT 743
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 8.3
Identities = 27/106 (25%), Positives = 42/106 (39%)
Frame = +3
Query: 195 NYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR 374
N P AP+ T + T + T T + TT PT ++T TT T
Sbjct: 701 NLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPT-----TTTSTTTTTTTT 755
Query: 375 *TLSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPLASRMSVAPSAT 512
T + P+ P T S++ T + Q P A++ + P+ T
Sbjct: 756 TTTTQTTPTTPVVTTPSTITPTTRPVTQPASQP--ATQPATTPTTT 799
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 27.9 bits (59), Expect = 8.3
Identities = 27/106 (25%), Positives = 42/106 (39%)
Frame = +3
Query: 195 NYWAPEAAPIISTGFSPDRTKTIARCL*TATSTP*GIHTTAPTEVPLSSSTDGTTMATPR 374
N P AP+ T + T + T T + TT PT ++T TT T
Sbjct: 524 NLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPT-----TTTSTTTTTTTT 578
Query: 375 *TLSSDPPSLPFKT*MSSLLTGTDLLIQTTILPPLASRMSVAPSAT 512
T + P+ P T S++ T + Q P A++ + P+ T
Sbjct: 579 TTTTQTTPTTPVVTTPSTITPTTRPVTQPASQP--ATQPATTPTTT 622
>AL023825-1|CAA19442.2| 491|Caenorhabditis elegans Hypothetical
protein Y16B4A.1 protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 618 VVAPHALQVWTPPDHS 665
+++PHA++V TPP HS
Sbjct: 315 LISPHAIRVTTPPKHS 330
>AF052060-1|AAC06226.1| 491|Caenorhabditis elegans Olf-1/EBF
transcription factor protein.
Length = 491
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 618 VVAPHALQVWTPPDHS 665
+++PHA++V TPP HS
Sbjct: 315 LISPHAIRVTTPPKHS 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,397,702
Number of Sequences: 27780
Number of extensions: 458446
Number of successful extensions: 1427
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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