Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19a18f
         (741 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...   183   4e-48
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   4.3  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    23   7.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.9  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.9  

>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score =  183 bits (446), Expect = 4e-48
 Identities = 98/195 (50%), Positives = 123/195 (63%), Gaps = 3/195 (1%)
 Frame = +2

Query: 158 PAP-ELESEYWSRDAQSELGERAWYDG-SSGYARNVVMFLGDGMSVATLTAARTLLGQRR 331
           P+P E  ++YW+  AQ  L  +   +  +   A+NV+MFLGDG+S+ TL A R  LG   
Sbjct: 68  PSPNEQHAQYWNNVAQDILDRQLHKNRLNRKVAKNVIMFLGDGLSIPTLAATRVYLGD-- 125

Query: 332 GQTGEESRLSFEHFPTVGLSKTYCLDAQVADSACSASAYLCGAKANLGTIGVSGHVARHH 511
               E + LSFE FP VGLSKTYC + QVADSAC+A+AYL G KAN GTIG++   A   
Sbjct: 126 ----ESTELSFERFPYVGLSKTYCANVQVADSACTATAYLAGVKANYGTIGLTAAAALGD 181

Query: 512 CTAATDAAHQLASIASWALDADRDAGIVTTTRVTHASPAGAYAHTADRNWESDGDVTA-G 688
           C A  D ++ + SIA WA DA    G VTTT VT+ASPAG YAHTA+RNWE +G +   G
Sbjct: 182 CQAQNDTSNHVHSIAKWAQDAGLSTGFVTTTEVTNASPAGIYAHTANRNWEYNGAIEKDG 241

Query: 689 CSGHAQLDIAQQLVH 733
                  DIA QL+H
Sbjct: 242 FDPAVCQDIASQLIH 256


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = -1

Query: 702 AWPLQPAVTSPSLSQFRSAVWAYAPAGEACVTRVVVTIPASLSASRAQEAM 550
           AWP + +  S  ++ FRS  W    A       +++    S+S    Q A+
Sbjct: 239 AWPPETSYGSKEINDFRSEDWFIQAASSPKDVIILLDSSGSMSGKEYQLAV 289


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 191 ATSTPTPARGPALRASAGSASTPRHPGGN 105
           +T+ PTPA   +  +S+ SAS+    GGN
Sbjct: 786 STTPPTPASLSSSSSSSSSASSTSLCGGN 814


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 138 ERLDPTSSRW*PSLSNPYRRPQEPAASSERSVNKRTMSAES 16
           ++L P  ++  PS+S P R      ASS  + N RT    S
Sbjct: 142 DKLTPVLAK--PSVSQPSRTHTSTNASSLNATNTRTTKTAS 180


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = -2

Query: 218 APPAHSGRRATSTPTPARGPAL-RASAGSASTPRHPGGNRPYL 93
           A P+H  RR+ S P P    +L +    S  +P     N+ Y+
Sbjct: 421 ALPSHPRRRSNSLPIPQIEISLYQGPTSSRDSPSIGSANKDYI 463


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -2

Query: 218 APPAHSGRRATSTPTPARGPALRASAGSASTPRHPGGNR 102
           AP   S  + T  PTP + P       S  +  +PG  R
Sbjct: 175 APTGSSSPQITPRPTPVKSPYEWMKKQSYQSQPNPGKTR 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,519
Number of Sequences: 2352
Number of extensions: 13034
Number of successful extensions: 46
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)