Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19a14r
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0176 - 12273045-12273115,12273214-12273413,12273617-122737... 36 0.037
04_03_0997 - 21548158-21548377,21548482-21548523,21548646-215487... 31 1.1
11_06_0014 - 19267601-19267831,19268338-19268454,19268733-192688... 30 1.4
08_01_0236 + 1982202-1982379,1982587-1982802,1982994-1983211,198... 30 1.4
01_06_0138 + 26865895-26865953,26866628-26867870 30 1.9
07_03_1545 - 27599605-27599859,27600012-27600123,27600216-27600478 29 2.4
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 29 2.4
08_01_0525 + 4564885-4565221,4565337-4565476,4565582-4565677,456... 29 4.3
05_07_0139 - 27968816-27968890,27969065-27969456,27969558-279696... 29 4.3
04_04_0116 + 22877296-22877482,22877578-22877627,22879057-228791... 29 4.3
11_06_0413 - 23242228-23242517,23242732-23243180,23243338-23244458 28 5.6
07_01_0105 - 798883-798942,799118-799186,799282-799345,799434-79... 28 5.6
05_03_0328 - 12468142-12468262,12468443-12468641,12468758-124689... 28 5.6
01_06_0808 + 32134765-32136570 28 5.6
08_02_1399 + 26771106-26771171,26772004-26772111,26772218-267722... 28 7.5
08_02_0363 + 16238710-16240224,16240537-16240545 28 7.5
01_07_0186 - 41857468-41857759,41857856-41857977,41858148-418582... 28 7.5
10_08_0497 - 18336819-18337140,18337226-18337360,18337579-183376... 27 9.9
04_04_0827 - 28457858-28458028,28458513-28458669,28458984-284590... 27 9.9
>04_03_0176 -
12273045-12273115,12273214-12273413,12273617-12273714,
12274573-12274629,12274710-12274846,12275085-12275142,
12275620-12275718,12275827-12275885,12278554-12278624,
12280763-12281019
Length = 368
Score = 35.5 bits (78), Expect = 0.037
Identities = 32/99 (32%), Positives = 47/99 (47%)
Frame = +1
Query: 40 DVYVNTVFSKSINFGLELLTLPQSTEHGVPFFALEVLKSYSEFFVLSEFLFVQGCELILG 219
++Y + SKS LE +T+ EH +PFF L + + SEF + F+ E IL
Sbjct: 186 EIYHCVLESKSF---LEKMTV---IEHTLPFF-LPIREVESEFLSSNAIKFIDHLEEILQ 238
Query: 220 EYIDNIVNVRSEVASAKSLSGPFNSLADSFHHFVENINE 336
Y+D R +V K L G N + + FH N+ E
Sbjct: 239 SYVDR----REQVRLIKELYG--NQIGELFHSLSYNLIE 271
>04_03_0997 -
21548158-21548377,21548482-21548523,21548646-21548722,
21548798-21548914,21549149-21549252,21549330-21549399,
21549489-21549598,21549845-21549932,21550006-21550096,
21550176-21550268,21550362-21550687,21550922-21551290,
21551934-21552020
Length = 597
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/55 (30%), Positives = 31/55 (56%)
Frame = +1
Query: 481 LLEQIIDIITSLVLNDVKEITKVFYEALLRSGHREAKSDQAHKHNSDFHFSRITS 645
L+ + ++ +V ND +E K+F + ++R G+R K Q HN D +F ++ S
Sbjct: 244 LISSDMSVLMRIVANDKREELKIFSQEIVRFGNR-CKDPQ--WHNLDRYFVKLES 295
>11_06_0014 -
19267601-19267831,19268338-19268454,19268733-19268890,
19269501-19269612,19269721-19269908,19270344-19270436,
19270521-19270708,19271635-19271720,19272662-19272811,
19273930-19274065,19274143-19274222,19275546-19275626,
19276114-19276245,19276490-19276610,19277457-19277518,
19277846-19277974,19278514-19278573,19278689-19278772,
19278852-19279532
Length = 962
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -3
Query: 174 DEEFRVALENLQSEEWDAVFGALWESEQFKAEVDTLAEHGIDIHVLMKELFAIFGQN 4
D + + N E + VF +L ++ F+A++DT EHG D + + + A F N
Sbjct: 348 DSDAQTEKRNAAQEIFSPVFSSLLDALLFRAQIDT-DEHGTDGELCIPDGLAQFRMN 403
>08_01_0236 +
1982202-1982379,1982587-1982802,1982994-1983211,
1983718-1984341
Length = 411
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 217 GEYIDNIVNVRSEVASAKSLSGPFNSLADSFHHFVENINEEMDLNVVIFQEIDHSFE-FR 393
G + IV ++V + + G S+ S H V ++EE+ LNV++F DH E F
Sbjct: 305 GNKDNEIVLHDTQVTGSPTKLGDDGSIELSRHIVVVPLDEELVLNVILFHGDDHEDECFE 364
Query: 394 QVFHLIDQVSEVLRG 438
V D+ S G
Sbjct: 365 FVLTNYDEESSFKEG 379
>01_06_0138 + 26865895-26865953,26866628-26867870
Length = 433
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 122 PCSVLCGRVSNSRPKLILL 66
PCS+ CGR+ N R KL+L+
Sbjct: 310 PCSLTCGRLLNLREKLVLV 328
>07_03_1545 - 27599605-27599859,27600012-27600123,27600216-27600478
Length = 209
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +2
Query: 11 PKMAKSSFMRTCMSIPCSARVSTSALNCSLSHRAPNTASHSSLWRF 148
P MA + R C SI S R AL L HR P + W F
Sbjct: 46 PLMALNHISRLCKSIDASVRFYVKALGFVLIHRPP-ALDFNGAWLF 90
>02_04_0481 + 23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = -3
Query: 228 DVFPKDKLAALYEQ--KLAEDEEFRVALE-NLQSEEWDAVFGALWESEQFKAEVDTLAEH 58
+V KD+L AL E+ KL E + E + S + +F + E + EVDTL
Sbjct: 1442 EVISKDQLEALVEKINKLTSSAESHLQRELAMSSSPIEKLFSLIDEVYALRHEVDTLRYE 1501
Query: 57 GIDIHV 40
D+H+
Sbjct: 1502 NEDLHL 1507
>08_01_0525 +
4564885-4565221,4565337-4565476,4565582-4565677,
4566079-4566146,4566542-4566643,4567492-4567630,
4567758-4567898,4568241-4568297,4568400-4568459,
4568866-4568973,4569834-4569994,4570453-4570531,
4571357-4571490,4571846-4571951,4572244-4572432,
4572595-4572822,4573028-4573183,4573491-4573532,
4573752-4573868,4573945-4574121
Length = 878
Score = 28.7 bits (61), Expect = 4.3
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Frame = -3
Query: 399 DLPEFKAVVDFLENDN-IEIHFFIDIFNEMME----TIGERVKRARQTLSGRDFTSYIND 235
DL KA D +E+D + ++ + ++E E +K+A + LS + I D
Sbjct: 641 DLELAKAEADKVEDDEELRKKLWLKVAKHVIEQEKGVKRENIKKAIEFLSETNNLLKIED 700
Query: 234 IIDVFPKDKLAALYEQKLAED-EEFRVALENLQSEEWDAVFGALWESEQFKAEVDTLAE 61
I+ FP L +++++ + +++ ++ L+ E DA GA + ++++ LA+
Sbjct: 701 ILPFFPDFVLIDDFKEEICKSLKDYDSQIDQLKQEMDDATRGA----DNIRSDIGALAQ 755
>05_07_0139 -
27968816-27968890,27969065-27969456,27969558-27969640,
27969841-27969933,27970012-27970223,27970604-27970753,
27971195-27971254,27971369-27971496,27972008-27972416,
27973514-27973570
Length = 552
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/91 (20%), Positives = 45/91 (49%)
Frame = +1
Query: 199 GCELILGEYIDNIVNVRSEVASAKSLSGPFNSLADSFHHFVENINEEMDLNVVIFQEIDH 378
G L G+ + + +++ +++ S+ +LAD + + + E + +++
Sbjct: 238 GKPLFPGKNVVHQLDLMTDLLGTPSMDAISRALADPYFKGLAKVEREPSCQPI--SKMEF 295
Query: 379 SFEFRQVFHLIDQVSEVLRGEVVKRTPELLK 471
FE R+V D + E++ E+++ P+LLK
Sbjct: 296 EFERRKVTK--DDIKELIFREILEYHPQLLK 324
>04_04_0116 +
22877296-22877482,22877578-22877627,22879057-22879180,
22879266-22879373,22879462-22880084
Length = 363
Score = 28.7 bits (61), Expect = 4.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 324 FNEMMETIGERVKRARQTLSGRDFTSYIND 235
F + +G+R+ R R L G+ + +YIND
Sbjct: 85 FGPVTGRVGQRIARGRFVLDGKVYHTYIND 114
>11_06_0413 - 23242228-23242517,23242732-23243180,23243338-23244458
Length = 619
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 257 SRPLRVCRALLTLSPIVSIISLKISMKKWI 346
S P+ CR LL+LS + + +K+SM W+
Sbjct: 306 SYPMVFCRGLLSLSFTLLLSLVKVSMASWL 335
>07_01_0105 -
798883-798942,799118-799186,799282-799345,799434-799516,
799957-800022,800143-800233,800622-800779,801144-801338,
801499-801628,803016-803168,803877-803962
Length = 384
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 549 NFGDFLDIIKDEAGNDIDNLFEQYIEFEEFRRSLDYLTTKDFRDLIYEM 403
N LDI++D+ +FE Y+ +F+ LT D R IYE+
Sbjct: 139 NIVKLLDIVRDQHSKTPSLIFE-YVNNTDFKVLYPTLTDYDIRYYIYEL 186
>05_03_0328 -
12468142-12468262,12468443-12468641,12468758-12468974,
12469896-12469994,12470843-12470899,12470943-12472577
Length = 775
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -3
Query: 255 FTSYINDIIDVFPKDKLAALYEQKLAEDEEFRVALENLQSEEWDAVFGALWESEQFKAEV 76
F Y+ ID D+ LYE+ L + +V + + E + G ESE+ K EV
Sbjct: 596 FNEYLQFEIDENEFDRTRELYERLLDRTKHLKVWISYTEFEASAGLAGEDGESEEIKKEV 655
>01_06_0808 + 32134765-32136570
Length = 601
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Frame = +1
Query: 70 SINFGLELLTLPQSTEHGVP-----FFALEVLKSYSEFFVLSEFLFVQGC-ELILGEYID 231
S++ ++LLT +S G P F L++ + ++ EFLF +GC +++L EY +
Sbjct: 269 SLSSVMQLLTFYESVAIGPPKPEKLFRLLDMYEVLNDLLPEVEFLFQEGCDDIVLTEYNE 328
Query: 232 NIVNVRSEV 258
++ + V
Sbjct: 329 VLLQLGESV 337
>08_02_1399 +
26771106-26771171,26772004-26772111,26772218-26772280,
26772382-26772468,26772931-26773056,26773418-26773551,
26773627-26773699,26773819-26773884,26774358-26774391,
26774904-26774953,26775067-26775191,26775278-26775392,
26775617-26775685
Length = 371
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1
Query: 37 EDVYVNTVFSKSINFGLELLTLPQSTEHGVPFFALEVL 150
+DV + T FSK + + L+ + PQ E V F A E+L
Sbjct: 225 KDVTI-TAFSKMVGYALQDVREPQMKEKDVKFQAAEIL 261
>08_02_0363 + 16238710-16240224,16240537-16240545
Length = 507
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -3
Query: 519 DEAGNDIDNLFEQYIEFEEFRRSLDYLTTKDFRDLIYE 406
+E +DN E Y +F ++ ++TT+DF ++ E
Sbjct: 39 NELSRYVDNSPECYYDFNSLNKNEKHMTTEDFLSMLLE 76
>01_07_0186 -
41857468-41857759,41857856-41857977,41858148-41858269,
41858439-41858547,41860076-41860174,41860251-41860384,
41860645-41860732,41860913-41860959,41861626-41861692,
41861783-41862004
Length = 433
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 490 QIIDIITSLVLNDVKEITKVFYEALLRSGHREAKSDQAHKHNSDFHFSRITSL 648
Q+ D+ S+ ++ ++F+E++LRS H + D K +D SR+ SL
Sbjct: 359 QLQDLNNSVQEISAEDALQMFHESILRSSHSSEEPDATLKRATD--SSRLQSL 409
>10_08_0497 -
18336819-18337140,18337226-18337360,18337579-18337673,
18337759-18337845,18337923-18338129,18338209-18338535,
18338711-18338803,18338861-18339175,18339283-18339792,
18339889-18339960,18341209-18341256,18341427-18341551,
18341640-18341661
Length = 785
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 370 IDHSFEFRQVFHLIDQVSEVLRGEVVKRTPELLKFDV 480
+D ++ F I Q++ +LRG + +R P+L F V
Sbjct: 334 VDPQSAYQHAFVFIRQLAVILRGALTERGPKLTSFVV 370
>04_04_0827 -
28457858-28458028,28458513-28458669,28458984-28459083,
28459204-28459231,28459321-28459396,28461276-28461355,
28461642-28461805,28461897-28462056,28462154-28462277,
28462901-28463941,28464141-28464259,28464512-28464823,
28465222-28465425,28466068-28466751,28467301-28467474
Length = 1197
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1
Query: 106 QSTEHGVPFFALEVLKSYSEFFVLSEFL 189
QS EH V ALE+ YSEF+ FL
Sbjct: 608 QSIEHDVVCDALELDNQYSEFWPFDSFL 635
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,348,304
Number of Sequences: 37544
Number of extensions: 318533
Number of successful extensions: 1079
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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