Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19a11f
(793 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 56 8e-09
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 48 1e-06
SPBC36.01c |||spermidine family transporter |Schizosaccharomyces... 41 2e-04
SPBC36.03c |||spermidine family transporter |Schizosaccharomyces... 41 2e-04
SPBC36.02c |||spermidine family transporter |Schizosaccharomyces... 41 2e-04
SPCC569.05c |||spermidine family transporter |Schizosaccharomyce... 39 7e-04
SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|ch... 39 7e-04
SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|c... 39 7e-04
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 36 0.007
SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr ... 34 0.020
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 33 0.047
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 31 0.19
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 31 0.25
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 29 0.58
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 29 0.58
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.58
SPBC609.04 |caf5||spermine family transmembrane transporter Caf5... 28 1.3
SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|ch... 28 1.3
SPAC24H6.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.8
SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr... 27 2.3
SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subu... 27 4.1
SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|c... 27 4.1
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 4.1
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 26 5.4
SPBC1348.02 |||S. pombe specific 5Tm protein family|Schizosaccha... 25 9.4
SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces pomb... 25 9.4
SPBPB2B2.19c |||S. pombe specific 5Tm protein family|Schizosacch... 25 9.4
SPAC977.01 |||S. pombe specific 5Tm protein family|Schizosacchar... 25 9.4
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 25 9.4
SPAC750.05c |||S. pombe specific 5Tm protein family|Schizosaccha... 25 9.4
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 55.6 bits (128), Expect = 8e-09
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 3/164 (1%)
Frame = +1
Query: 262 AISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSAT-CDFRMTSAD--KGWLTAAP 432
A++ GFGR+ + L V G + + I S +L D A+ +LT +
Sbjct: 68 AMNEIGFGRYQWYLFFVAGFGWMSDNIWPVCTSLILMRLDEVDGPHPPAEGRAPYLTLSQ 127
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 612
LG+++G+ W ADT GR+ T L GV +I+ + F V G
Sbjct: 128 NLGLLVGAMVWSLSADTIGRRWAFNLTFLFTGVFAVIAGASPNFASICVFDALWSFGVGG 187
Query: 613 AMGICFPYLGEFQQTKYREKILCWMEMFWTLGVILLPLIAWGII 744
+ + E + + + +L M +W +G ++ L++WG+I
Sbjct: 188 NLPVDSAIFLEALPSSH-QWLLTVMSFWWAIGQVIANLVSWGLI 230
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 48.4 bits (110), Expect = 1e-06
Identities = 40/144 (27%), Positives = 67/144 (46%)
Frame = +1
Query: 310 VTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKG 489
+ GL++ I+ V+ ++ +T+ K ++T+A LG ++G G LAD G
Sbjct: 96 IGGLLFGYDTGVISGALVVIGTSLGGHELTNGGKEFITSATSLGALLGGIIAGALADFFG 155
Query: 490 RKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAMGICFPYLGEFQQTKYRE 669
RK V+ ++ V I+ L + RFV G+ V A I YL E +K R
Sbjct: 156 RKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIAPSKIRG 215
Query: 670 KILCWMEMFWTLGVILLPLIAWGI 741
+++ + T G + IA+GI
Sbjct: 216 RLVIIYVLLITAGQV----IAYGI 235
>SPBC36.01c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 580
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/99 (23%), Positives = 40/99 (40%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 612
MLG +G W +++ GRK L L L V I + Q + M CRF G+
Sbjct: 184 MLGYCLGPICWAPMSEITGRKTPLYIGLFLFSVFQIAVATAQDIQTIMICRFFGGYGACV 243
Query: 613 AMGICFPYLGEFQQTKYREKILCWMEMFWTLGVILLPLI 729
+ + + +YR + +G ++ P++
Sbjct: 244 PLCVVAAAFADMYPNRYRGTAITIFAAVIFVGPLVAPIV 282
>SPBC36.03c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 538
Score = 40.7 bits (91), Expect = 2e-04
Identities = 33/151 (21%), Positives = 61/151 (40%)
Frame = +1
Query: 292 HFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGC 471
H LLA T L A+ + + + +A +T A G + + G G W
Sbjct: 99 HVALLAFTTLT-ASWGSSVFSAAATIFAAKYHIGLTVALLGM--SLYVCGFASGPILWAP 155
Query: 472 LADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAMGICFPYLGEFQ 651
+++ GRK+ L+ + + + I + + + M CRF +GF + + + +
Sbjct: 156 ISELVGRKIPLIVGMFMFSIFSIAVAVAKDVQTVMICRFFSGFCASSPLSVVAAAFADMF 215
Query: 652 QTKYREKILCWMEMFWTLGVILLPLIAWGII 744
K R +C G ++ P IA G +
Sbjct: 216 DNKTRGPAVCIFACITFAGPLIGP-IAGGFL 245
>SPBC36.02c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 40.7 bits (91), Expect = 2e-04
Identities = 23/99 (23%), Positives = 42/99 (42%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 612
+LG G W L++ GRK ++ +L G+ I + + + M CRF GF +
Sbjct: 181 LLGYCSGPIIWAPLSELSGRKPPILIGMLGFGIFNISVAVGKDIQTIMMCRFFAGFFASA 240
Query: 613 AMGICFPYLGEFQQTKYREKILCWMEMFWTLGVILLPLI 729
+ + L + KYR + G ++ P++
Sbjct: 241 PLTVVAAALADMYSNKYRGTAITLFSAMVFDGPLVSPIV 279
>SPCC569.05c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 576
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/99 (21%), Positives = 42/99 (42%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 612
+ G + G W L++ GRK+ L+ + G+ I + + + M CRF +GF +
Sbjct: 180 LCGYIAGPIVWAPLSELSGRKLPLLIGMFGFGIFNISVAVAKDIQTIMMCRFFSGFFASA 239
Query: 613 AMGICFPYLGEFQQTKYREKILCWMEMFWTLGVILLPLI 729
+ + + K+R + G ++ P+I
Sbjct: 240 PLTVVAAAFADMYSNKHRGTAITIFAALVFDGPLVSPII 278
>SPAC1399.02 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 39.1 bits (87), Expect = 7e-04
Identities = 29/135 (21%), Positives = 57/135 (42%)
Frame = +1
Query: 337 AIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTL 516
A+ T+++ +P+ + S+ W+ A L F G +++ GRK+VL +++
Sbjct: 104 ALDQTVITTAIPTIVANLDGGSS-YSWIGTAYSLAETSILPFCGIMSEVVGRKIVLYTSI 162
Query: 517 LLDGVVGIISSFVQILPIFMACRFVNGFAVAGAMGICFPYLGEFQQTKYREKILCWMEMF 696
+L + Q + + CR V G G M + + + + R M +
Sbjct: 163 VLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGIMSLVTIVIADITPLQTRPYYTGCMGVT 222
Query: 697 WTLGVILLPLIAWGI 741
W + ++ PLI I
Sbjct: 223 WGVASVMGPLIGGAI 237
>SPAC3H1.06c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 589
Score = 39.1 bits (87), Expect = 7e-04
Identities = 29/136 (21%), Positives = 57/136 (41%)
Frame = +1
Query: 334 TAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVST 513
+A+ T+++ +P+ + S+ W+ A L F G +++ GRK+VL ++
Sbjct: 103 SALDQTVITTAIPTIVANLDGGSS-YSWIGTAYTLAQTSILPFCGIMSEVVGRKIVLYTS 161
Query: 514 LLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAMGICFPYLGEFQQTKYREKILCWMEM 693
++L + Q + + CR V G G + + + + R M +
Sbjct: 162 IVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGITSLVTIVIADITPLQTRPYYTGCMGV 221
Query: 694 FWTLGVILLPLIAWGI 741
W L ++ PLI I
Sbjct: 222 TWGLASVMGPLIGGAI 237
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 35.9 bits (79), Expect = 0.007
Identities = 33/161 (20%), Positives = 73/161 (45%), Gaps = 1/161 (0%)
Frame = +1
Query: 238 EHGADFEAAISATGFGRFHFCLLAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGW 417
E+G FEA ++ + ++GL++ G+ + + + ++S K
Sbjct: 67 ENGEGFEAEKISSWIWVLS-AVAGISGLLFGYDT-GVISGALAVLGSDLGHVLSSGQKEL 124
Query: 418 LTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNG 597
+T+A +I + G LAD GRK +L+ + + +I + + + + + RF+ G
Sbjct: 125 ITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVG 184
Query: 598 FAVAGAMGICFP-YLGEFQQTKYREKILCWMEMFWTLGVIL 717
+ + G + P Y+ E + R +++ +F T G ++
Sbjct: 185 YGI-GLTSLIVPMYITELAPARLRGRLVIIYVVFITGGQLI 224
>SPBC23G7.13c |||urea transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 664
Score = 34.3 bits (75), Expect = 0.020
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +1
Query: 325 YANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKVVL 504
Y +G+ + V+P ATC + +T +P+LG++ W +A +G K +
Sbjct: 426 YLYLLMGVLVCPAVVP-ATCVMLFSRVSTIAVTVSPVLGIISSIITWLVVARAEGGKTLT 484
Query: 505 VST------LLLDGVVGIISSFVQIL 564
+ T +L VVG++S + IL
Sbjct: 485 IETTGANNPMLAGNVVGLLSPALYIL 510
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 33.1 bits (72), Expect = 0.047
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 15/120 (12%)
Frame = +1
Query: 292 HFCLLAVTGLI-----YANTAIG--ITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVI 450
HF +AV G+ Y + +IG ITI+ + P T + D G + +G ++
Sbjct: 75 HFLNVAVAGVALMSDGYCSNSIGTVITILRKLYPEETTHNKSLQ-DIGMIA---YVGTIV 130
Query: 451 GSYFWGCLADTKGRK--------VVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAV 606
G +G +D GRK +++VST L G G S +L +A RF G +
Sbjct: 131 GQLSFGWYSDRFGRKNGMITATIILIVSTALCTGAYGYKGSINGMLSALIAYRFFLGIGI 190
>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 541
Score = 31.1 bits (67), Expect = 0.19
Identities = 33/137 (24%), Positives = 55/137 (40%)
Frame = +1
Query: 319 LIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADTKGRKV 498
LI G ++ S + + + DF ++ + + ++G GS + L+ GR V
Sbjct: 107 LIAFVVTFGSSVYSSGIGNVSMDFGVSISVSSLGSCVFLVGFGFGSLPFAPLSGIYGRFV 166
Query: 499 VLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAGAMGICFPYLGEFQQTKYREKIL 678
V TLL+ + I Q + + RF GF + + C L + R +L
Sbjct: 167 VYFCTLLMFTLFQIGGGCAQNIWTLVILRFFQGFFGSTPLSNCGGTLSDLFTPIQRTYVL 226
Query: 679 CWMEMFWTLGVILLPLI 729
F LG I P+I
Sbjct: 227 PGFCTFPFLGPIFGPII 243
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 30.7 bits (66), Expect = 0.25
Identities = 24/100 (24%), Positives = 49/100 (49%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 612
++G+++G + L++ GR+ + + L ++ I ++ L +F+ RF +GF +
Sbjct: 85 VIGVMLGPLIFSPLSELYGRRPLNIFGYTLFALMQIPTALSVNLAMFVVFRFFSGFFGSV 144
Query: 613 AMGICFPYLGEFQQTKYREKILCWMEMFWTLGVILLPLIA 732
+GI L + + R K + + LG+ L P IA
Sbjct: 145 GLGIGAGSLSDMFSKRDRGKYI----GIYFLGICLGPAIA 180
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 29.5 bits (63), Expect = 0.58
Identities = 21/99 (21%), Positives = 38/99 (38%)
Frame = +1
Query: 304 LAVTGLIYANTAIGITIVSFVLPSATCDFRMTSADKGWLTAAPMLGMVIGSYFWGCLADT 483
+AV G G +I S +P F + + +LG G W + +
Sbjct: 77 VAVMGSACLCAGFGSSIFSGAVPEVMVKFHVCRTVALLGISLYVLGFASGPVVWAPMCEL 136
Query: 484 KGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGF 600
GR+ ++ + + + I + + + M CRF GF
Sbjct: 137 FGRRRPMIIAVFIFCIFHIAVATAKDIQTVMICRFFCGF 175
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 29.5 bits (63), Expect = 0.58
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 631 PYLGEFQQTKYRE-KILCWMEMFWTLGVILLPLIAWGIIPIQG 756
P LG+ T +R+ I C + LGV +LP I + IIP+ G
Sbjct: 1243 PLLGDASSTIHRQGAIECIYHVVQRLGVRILPYILYLIIPLLG 1285
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 0.58
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Frame = -3
Query: 605 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
++ P+T+L A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2564 SSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTS-TPITSSTVVNSSTPIT-SSTA 2621
Query: 428 AAVSQPL-SAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 303
S P+ S+ V+ S ST T + +VL +P+T+S
Sbjct: 2622 LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSS 2667
Score = 29.5 bits (63), Expect = 0.58
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = -3
Query: 605 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
T+ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2768 TSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS-TPITSSTVVNSSTPITSSTVL 2826
Query: 428 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 303
+ + S+ V+ S ST T + +VL +P+T+S
Sbjct: 2827 NSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 2871
Score = 28.3 bits (60), Expect = 1.3
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -3
Query: 605 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
T+ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 1124 TSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTS-TPITSSTVVNSSTPITSSTVV 1182
Query: 428 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 303
+ S+ V+ S ST + T + VL +P+T+S
Sbjct: 1183 NTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSS 1227
Score = 27.5 bits (58), Expect = 2.3
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -3
Query: 605 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
T+ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2360 TSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 2418
Query: 428 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 303
+ S+ V+ S S+ + T + V+ +P+T+S
Sbjct: 2419 NTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSS 2463
Score = 27.5 bits (58), Expect = 2.3
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -3
Query: 605 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2636 SSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 2694
Query: 428 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 303
+ S+ V+ S ST T + +VL +P+T+S
Sbjct: 2695 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 2739
Score = 27.5 bits (58), Expect = 2.3
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -3
Query: 605 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2864 SSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 2922
Query: 428 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 303
+ S+ V+ S ST T + +VL +P+T+S
Sbjct: 2923 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 2967
Score = 27.1 bits (57), Expect = 3.1
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
Frame = -3
Query: 605 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 2960 SSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 3018
Query: 428 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 303
+ S+ V+ S ST T + VL +P+T+S
Sbjct: 3019 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSTVLNSSTPITSS 3063
Score = 25.8 bits (54), Expect = 7.1
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -3
Query: 605 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 1292 SSTPITSSTALNTSTSITSSSVLNSSTPITSSTVVNTS-TPITSSSVLNSSTPITSSTVV 1350
Query: 428 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 303
+ + S+ V+ S ST T + V+ +P+T+S
Sbjct: 1351 NSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSS 1395
Score = 25.8 bits (54), Expect = 7.1
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -3
Query: 605 TAKPLTNLQAMNMGKIWTNDEMI-PTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
++ P+T+ A+N T+ ++ +TP +S NT+ P S+ P+T +
Sbjct: 1964 SSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNTS-TPITSSSVLNSSTPITSSTVV 2022
Query: 428 AAVSQPLSAEVMRKSHVADGST---NDTIVIPMAVLA*ISPVTAS 303
+ S+ V+ S ST T + +VL +P+T+S
Sbjct: 2023 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSS 2067
>SPBC609.04 |caf5||spermine family transmembrane transporter
Caf5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 28.3 bits (60), Expect = 1.3
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTK--GRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAV 606
+LG IG L++ GR+ + V +LL+ + I ++ L + + RF+ GF
Sbjct: 129 VLGYAIGPLILSPLSEIPQVGRQKIYVLSLLVFVCLQIPTALGSSLGVLLPMRFLAGFFG 188
Query: 607 AGAMGICFPYLGEFQQTKYREKILCWMEMFWTLGVILLPLI 729
+ A+ L + Q +C FW +G I P++
Sbjct: 189 SPALATGGATLADIWQPWLLPYFMC----FWAIGAIGGPVL 225
>SPAC1B3.15c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 628
Score = 28.3 bits (60), Expect = 1.3
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 5/156 (3%)
Frame = +1
Query: 232 FLEHGADFEAAISAT-GFGRFHFCLLAVTGLIYANTAIG--ITIVSFVLPSATCDFRMTS 402
FL + ++S T + H L V+GL Y ++G ++ VS ++ + MT
Sbjct: 166 FLSRSVTYSISLSLTMNKHQGHSLLQTVSGLNYHTLSVGTGLSYVSLIIFDLPSNLLMTR 225
Query: 403 AD-KGWLTAAPMLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMA 579
AD + WL+ + +IG+ + TKG S F+ A
Sbjct: 226 ADPRLWLSRIQVTTGIIGACH--AVLGTKGSSA---------------SGFI-------A 261
Query: 580 CRFVNGFAVAGAM-GICFPYLGEFQQTKYREKILCW 684
RF NG A+AG G F Y F + ++ K + W
Sbjct: 262 LRFFNGLAIAGMWPGFAF-YTSRFYRDQHLGKRIGW 296
>SPAC24H6.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 220
Score = 27.9 bits (59), Expect = 1.8
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Frame = -3
Query: 656 VCWNSPRYGKQIPIAPATAKPLTNLQAMNMGKIWTNDEMIPTTPSSSRVDTNTTLRPFVS 477
V WN P G + T+ + ++ + ++ D+M+ P + +V + + L PF
Sbjct: 11 VHWNDPSSGIFLSQTQRTSSTSSLKKSASSRRLVYGDDMLAPKPLAGQVLSKSPLPPFSP 70
Query: 476 AKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVADGST--NDT 354
+K + + NI +M+KS D T NDT
Sbjct: 71 SKIMNRSISVPPTNISVPQISSNPLNLMKKSSDNDIFTTFNDT 113
>SPCC965.13 |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 537
Score = 27.5 bits (58), Expect = 2.3
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 433 MLGMVIGSYFWGCLADTKGRKVVLVSTLLLDGVVGIISSFVQILPIFMACRFVNGFAVAG 612
++G G G ++D GRK V V +L+L + I + LP+ MA +N A+AG
Sbjct: 135 IVGNAFGPMLLGPMSDIFGRKWVYVGSLILYIIFQIPQALAYNLPM-MA---INS-AIAG 189
Query: 613 AMG 621
A G
Sbjct: 190 AFG 192
>SPAC3H5.06c |pol1|swi7, polA|DNA polymerase alpha catalytic subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1405
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -2
Query: 684 PAQDFLSVFGLLELSQVREANTHSTGNGKTIDESASHEYGQDLDER*DDTDHAV 523
P+Q F + L + + R + S N + D + EY + + +R D+ D V
Sbjct: 10 PSQRFAELRALRQAGKTRASTYESKENEELYDNVSEEEYRKIVRQRLDEDDFVV 63
>SPCC663.02 |wtf14||wtf element Wtf14|Schizosaccharomyces pombe|chr
3|||Manual
Length = 222
Score = 26.6 bits (56), Expect = 4.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -3
Query: 455 EPMTIPNIGAAVSQPLSAEVMRKSHVADGSTNDTIVIPMAVL 330
E TIP S+P +VM S VAD T + IP +L
Sbjct: 35 EEATIPQSLVKTSRPADHKVMEASKVADTRTAWSTKIPAVLL 76
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.6 bits (56), Expect = 4.1
Identities = 17/85 (20%), Positives = 40/85 (47%)
Frame = -3
Query: 608 ATAKPLTNLQAMNMGKIWTNDEMIPTTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIG 429
+++ P +++ + M + ++ IPT+ SS + TT+ +S+ P T ++
Sbjct: 522 SSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSS----IPSTFSSVS 577
Query: 428 AAVSQPLSAEVMRKSHVADGSTNDT 354
+ +S S+ ++ ST+ T
Sbjct: 578 SILSSSTSSPSSTSLSISSSSTSST 602
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -3
Query: 533 TTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKSHVADGSTN 360
T P+S+RV T T S KQP T ++VS P S+ V +S S++
Sbjct: 437 TQPASTRVQTTTVSSISTSVKQP------TASVASSSVSVPSSSSVQPQSSTPISSSS 488
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 568 IFMACRFVNGFAVAGAMGICFPYLGEFQQTKYREK 672
I MAC F+ GFA A + +GE +YR K
Sbjct: 373 IVMACLFIFGFAQTWAPA-AYVIVGESYPVRYRSK 406
>SPBC1348.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 9.4
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 437 WVWSLVHISGVAWLIQRAVRLY 502
W+W+ +H S + + Q+ + LY
Sbjct: 114 WIWTCLHFSKIIFPAQKVICLY 135
>SPBC14C8.01c |cut2|SPBC1815.02c|securin|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 301
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -3
Query: 533 TTPSSSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPLSAEVMRKS 384
T P + +T + F+SA +K PM I + +P S + R +
Sbjct: 49 TVPRTVLGGKSTNISKFISAPSTKKMSPMDISMDSPTILEPNSQGISRSA 98
>SPBPB2B2.19c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 9.4
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 437 WVWSLVHISGVAWLIQRAVRLY 502
W+W+ +H S + + Q+ + LY
Sbjct: 114 WIWTCLHFSKIIFPAQKVICLY 135
>SPAC977.01 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1||Partial|Manual
Length = 316
Score = 25.4 bits (53), Expect = 9.4
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 437 WVWSLVHISGVAWLIQRAVRLY 502
W+W+ +H S + + Q+ + LY
Sbjct: 86 WIWTCLHFSKIIFPAQKVICLY 107
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 25.4 bits (53), Expect = 9.4
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 182 YFKSETPSENNRKW 223
YF TP E NRKW
Sbjct: 7 YFFGPTPQEQNRKW 20
>SPAC750.05c |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.4 bits (53), Expect = 9.4
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = +2
Query: 437 WVWSLVHISGVAWLIQRAVRLY 502
W+W+ +H S + + Q+ + LY
Sbjct: 114 WIWTCLHFSKIIFPAQKVICLY 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,563,418
Number of Sequences: 5004
Number of extensions: 78927
Number of successful extensions: 256
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 385381248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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