Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19a11f
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   2.0  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         25   2.0  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         25   2.0  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         25   2.0  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   8.2  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -3

Query: 521 SSRVDTNTTLRPFVSAKQPQKYEPMTIPNIGAAVSQPL 408
           +S++DT    + F     PQ  +P+ +P +G AVS+ L
Sbjct: 579 ASQIDTLEPAKGF----SPQTQQPVNLPLVGVAVSRVL 612


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 121 HRHRKRHLGMRVRHRGYRERRLG 53
           HRH  RH   R R R YR +R G
Sbjct: 27  HRHHSRHHHRRRRER-YRSQRFG 48


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 121 HRHRKRHLGMRVRHRGYRERRLG 53
           HRH  RH   R R R YR +R G
Sbjct: 27  HRHHSRHHHRRRRER-YRSQRFG 48


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 121 HRHRKRHLGMRVRHRGYRERRLG 53
           HRH  RH   R R R YR +R G
Sbjct: 27  HRHHSRHHHRRRRER-YRSQRFG 48


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 645  VPTDQIQRENPVLDGNVLDSRCHLASLDRLGH 740
            VP D++ +++  L GN   S  + A +   GH
Sbjct: 1196 VPADELMKKDATLGGNATTSTSNEAHVIANGH 1227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 912,829
Number of Sequences: 2352
Number of extensions: 19990
Number of successful extensions: 40
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)