Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19a11f
         (793 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   5.7  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   5.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   7.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.9  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   9.9  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   9.9  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 532 VGIISSFVQILPIFMACRFVNGFAVAGAMGICFPYLGEFQQTK 660
           +G +    Q L  F+     +G A AGA  +CF Y  +F +T+
Sbjct: 102 LGGVDKNTQFLRYFVG-NLASGGA-AGATSLCFVYPLDFARTR 142


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 532 VGIISSFVQILPIFMACRFVNGFAVAGAMGICFPYLGEFQQTK 660
           +G +    Q L  F+     +G A AGA  +CF Y  +F +T+
Sbjct: 102 LGGVDKNTQFLRYFVG-NLASGGA-AGATSLCFVYPLDFARTR 142


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 620 VFASRTWESSNRPNTERKSCAGWKCSG 700
           ++ +  ++S +  N E+  C+G  C G
Sbjct: 21  IYKTEAFDSLHAGNAEKTLCSGQVCLG 47


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 674 IFSLYLVCWNSPRYGKQ 624
           ++S+ +VCW    YG++
Sbjct: 821 VWSMGIVCWEVMSYGER 837


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 148 MAKSLVGAYHRHRKR 104
           M  SL+G   RH+KR
Sbjct: 106 MEASLIGLVERHKKR 120


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 148 MAKSLVGAYHRHRKR 104
           M  SL+G   RH+KR
Sbjct: 106 MEASLIGLVERHKKR 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,480
Number of Sequences: 438
Number of extensions: 5646
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)