Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19a07f
(754 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337... 36 0.035
10_07_0053 - 12406958-12407011,12407012-12407168,12407280-124074... 31 1.3
09_04_0010 - 13686424-13686822 29 4.0
01_06_1212 + 35459675-35460073 29 4.0
10_06_0102 + 10758601-10758948,10759051-10759257,10759349-107595... 29 5.2
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580... 29 5.2
04_04_0326 - 24407201-24407374,24407397-24407460,24408266-244086... 29 5.2
04_03_0857 + 20352331-20352582,20352740-20352951,20353047-203533... 29 5.2
01_06_1684 + 39151412-39151702,39152410-39152548,39152926-391530... 29 5.2
06_03_1267 - 28851286-28851306,28851452-28851520,28852031-288520... 28 6.9
04_03_0858 + 20357519-20357573,20358072-20358119,20360675-203609... 28 6.9
02_04_0086 + 19610899-19610992,19613399-19613652,19613744-196139... 28 6.9
01_05_0442 + 22233024-22233026,22233060-22233650,22233779-22234177 28 6.9
09_02_0256 - 6350559-6350573,6351025-6351762 28 9.2
01_06_1243 - 35681569-35681712,35681799-35681904,35682054-356821... 28 9.2
01_05_0062 + 17755460-17755522,17756878-17756953,17757074-177571... 28 9.2
01_01_0404 + 3053558-3053939,3054028-3054123,3054217-3054309,305... 28 9.2
>05_03_0359 - 12929240-12929376,12931379-12933497,12933594-12933773,
12933905-12934118,12934199-12934551,12934642-12934864,
12934953-12935230,12935456-12935725,12935817-12935939,
12936025-12936102,12936351-12936527,12936597-12936686,
12937010-12937120,12937397-12937585,12937667-12937858,
12937990-12938076,12938153-12938257,12938340-12938396,
12938471-12938545,12938647-12938763,12938876-12939000,
12939082-12939121,12939241-12939291,12939382-12939569,
12939808-12939901,12939976-12940149,12940242-12940337,
12940597-12940689,12940794-12940955,12941034-12941240,
12941356-12941728,12942379-12942436,12943096-12943171,
12943874-12943941,12944321-12944642
Length = 2433
Score = 35.9 bits (79), Expect = 0.035
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 80 YDNEVLLKLESPRYQHVQGPDGLHLEDLWLKVKDQKESDQYEPERDNAYHLFTRSNPKTS 259
+ +E L E P +HV+ P LE LKVK E +Y P RD +H++T N +
Sbjct: 1407 WSDEKLSYEEEPILRHVEPPLSALLELDKLKVKGYNEM-KYTPSRDRQWHIYTLRNTENP 1465
Query: 260 QPL 268
+ L
Sbjct: 1466 KML 1468
>10_07_0053 -
12406958-12407011,12407012-12407168,12407280-12407410,
12407592-12407727,12407953-12408224,12408604-12408893,
12408984-12409285,12409359-12409424,12409506-12409571,
12409855-12409926,12410013-12410084,12410207-12410281,
12410367-12410438,12410531-12410663,12411556-12411655
Length = 665
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 521 NRTSGSKVSQYHLVGHSLGGHQVGIIGRHLGGKVPYITSLDPASPGWNLNPNRFQ 685
N G + QY+L L ++ + G G VPY S P NLN N+ Q
Sbjct: 107 NNLGGGQNIQYNLPNKKL--ERLNLAGNQFAGNVPYSISTMPKLKYLNLNHNQLQ 159
>09_04_0010 - 13686424-13686822
Length = 132
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 505 FHRMAEPDQRLQGLSVPPRGAQSRRTPGRHHREASGWKSSIH 630
+HR+ +P + L PP Q RR+P HH E G +S ++
Sbjct: 54 YHRIYKPRSSGRCLLHPP--PQGRRSPHLHHPELLGTRSGLY 93
>01_06_1212 + 35459675-35460073
Length = 132
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 505 FHRMAEPDQRLQGLSVPPRGAQSRRTPGRHHREASGWKSSIH 630
+HR+ +P + L PP Q RR+P HH E G +S ++
Sbjct: 54 YHRIYKPRSSGRCLLHPP--PQGRRSPHLHHPELLGTRSGLY 93
>10_06_0102 + 10758601-10758948,10759051-10759257,10759349-10759507,
10759617-10759709,10759913-10760008,10760457-10760724,
10760805-10761047,10761298-10761422,10761499-10761615,
10761705-10761779,10761886-10761942,10762035-10762139,
10762244-10762330,10762790-10763047,10763075-10763263,
10763418-10763528,10763640-10763729,10763814-10763990,
10764075-10764152,10764412-10764726,10764819-10765162,
10765304-10765541,10765631-10765998,10766106-10766316,
10766622-10766801,10766886-10769045,10769151-10769207
Length = 2251
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 107 ESPRYQHVQGPDGLHLEDLWLKVKDQKESDQYEPERDNAYHLFTRSNPKTSQ 262
E P +HV+ P LE + + E +Y P RD +H++T K Q
Sbjct: 1243 EDPMLRHVEPPLSTFLELNKVNLDGYNEV-KYTPSRDRQWHIYTLIKNKKDQ 1293
>07_03_0033 +
12656255-12656297,12657402-12657408,12657484-12658016,
12658106-12658224,12658329-12658688,12659602-12659784
Length = 414
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 329 ILVHGWRNVATSNFNALLVPAFLQAEDL-NVIIADWSIGAAGNYVVALLNVFKSAKAVAG 505
I+ +GW + + FNAL + QA+ + +V+++D + V +NVF+S +
Sbjct: 5 IMTNGWTDKRGNRFNALKISKTAQAKRISSVVVSDEKF---WDNVELAINVFRSLVKLLR 61
Query: 506 FIE 514
F++
Sbjct: 62 FVD 64
>04_04_0326 -
24407201-24407374,24407397-24407460,24408266-24408689,
24408885-24409057,24409178-24409275,24409723-24409853,
24410053-24410174,24411091-24411245,24411976-24412081,
24412328-24412419,24412499-24412620,24413444-24413544,
24413636-24413849,24414173-24414311,24415228-24415584
Length = 823
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 485 SAKAVAGFIEWLNRTSGSKVSQYHL--VGHSLGGHQVGIIGRHLGGKVPYI 631
S+ GF+ L GS+ Y + VGHSLGG ++G L G+ P +
Sbjct: 472 SSSLTVGFLPALVG-EGSECHGYKIRVVGHSLGGSVATVLGMMLFGRYPNV 521
>04_03_0857 +
20352331-20352582,20352740-20352951,20353047-20353308,
20353418-20353726
Length = 344
Score = 28.7 bits (61), Expect = 5.2
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 308 DEKKRTIILVHGWRNVATSNFNALLVPAFLQAEDLNVIIADWSIGAAGNYVVALLNVFKS 487
D+ K II VHG+ + ++AL + L A++L + S G Y + N +
Sbjct: 60 DQAKYKIIFVHGFDSC---RYDALPISPEL-AQELGIY--QLSFDRPG-YAESDPNPAST 112
Query: 488 AKAVAGFIEWL--NRTSGSKVSQYHLVGHSLGGHQVGIIGRHLGGKVPYITSLDPASPGW 661
K++A +E L N G K ++L+G S+GG + +H+ ++ + L P W
Sbjct: 113 EKSIALDVEELADNLQLGPK---FYLMGFSMGGEIMWSCLKHISHRLAGVAILGPVGNYW 169
>01_06_1684 +
39151412-39151702,39152410-39152548,39152926-39153040,
39153232-39153332,39153688-39153809,39153885-39153976,
39155288-39155393,39155477-39155631,39155904-39156031,
39156349-39156479,39157171-39157268,39157371-39158162,
39158472-39158523
Length = 773
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 500 AGFIEWLNRTSGSKVSQYHL--VGHSLGGHQVGIIGRHLGGKVP 625
AGF+ L +G + Y++ VGHSLGG ++G L G+ P
Sbjct: 424 AGFLSSL-LGAGCECHGYNIEIVGHSLGGSVAALLGIRLYGRFP 466
>06_03_1267 -
28851286-28851306,28851452-28851520,28852031-28852066,
28852381-28852486,28852869-28852997,28853685-28853797,
28853907-28853993,28854106-28854543
Length = 332
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 388 GFPPGRGFECHHRRLEHRGSRQLRSGPAECF*IGQSCG--WFHRMAEPDQR 534
G PP ECHH + + + +R GP + +CG W +++ P R
Sbjct: 249 GRPPSAA-ECHHCGINAKATPMMRRGPDGPRTLCNACGLMWANKVKMPSSR 298
>04_03_0858 +
20357519-20357573,20358072-20358119,20360675-20360922,
20361152-20361363,20361480-20361741,20361832-20362143
Length = 378
Score = 28.3 bits (60), Expect = 6.9
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +2
Query: 308 DEKKRTIILVHGWRNVATSNFNALLVPAFLQAEDLNVIIADWSIGAAGNYVVALLNVFKS 487
++ K II VHG+ + ++AL + L A++L + S G Y + N+ +
Sbjct: 93 EQAKYKIIFVHGFDSC---RYDALPISPEL-AQELGIY--QLSFDRPG-YAESDPNLAST 145
Query: 488 AKAVAGFIEWL--NRTSGSKVSQYHLVGHSLGGHQVGIIGRHLGGKVPYITSLDPASPGW 661
K++A IE L N G K ++L+G S+GG + +H+ ++ + L P W
Sbjct: 146 EKSIALDIEELADNLQLGPK---FYLMGFSMGGEIMWSCLKHISHRLAGVAILAPVGNYW 202
>02_04_0086 +
19610899-19610992,19613399-19613652,19613744-19613955,
19614059-19614320,19614432-19614728
Length = 372
Score = 28.3 bits (60), Expect = 6.9
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Frame = +2
Query: 308 DEKKRTIILVHGWRNVATSNFNALLVPAFLQAEDLNVIIADWSIGAAGNYVVALLNVFKS 487
D+ K II VHG+ + ++AL V L AE+L V + + G + + ++
Sbjct: 92 DQAKHKIIFVHGFDSC---RYDALQVSPEL-AEELGVYMVSFDRPGYGE---SDPHPGRT 144
Query: 488 AKAVAGFIEWLNRTSGSKVS-QYHLVGHSLGGHQVGIIGRHLGGKVPYITSLDPASPGWN 664
++A IE L G ++ +++L+G+S+GG + +++ ++ ++ L P W
Sbjct: 145 EDSIAFDIEGL--ADGLQLGPKFYLIGYSMGGEIMWSCLKNIPHRLAGVSILGPVGNYWW 202
Query: 665 LNPNRFQSTDGIYTEV 712
ST+ Y ++
Sbjct: 203 SGYPSNVSTEAWYVQL 218
>01_05_0442 + 22233024-22233026,22233060-22233650,22233779-22234177
Length = 330
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 491 KAVAGFIEWLNRTSGSKVSQYHLVGHSLGGHQVGIIGRHLGGKVPYITSLDPAS 652
KAV G W+NR +GS + H++ ++ + L VP I +D AS
Sbjct: 151 KAVGGGGAWMNRAAGSSIKN-HVMSERRRWEKLNEMFLTLKSLVPSIDKVDKAS 203
>09_02_0256 - 6350559-6350573,6351025-6351762
Length = 250
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -3
Query: 590 RPGVRRDCAPRGGTERPWSRWSGSAIR 510
R VRR RG +RPW RW+ S IR
Sbjct: 93 RRRVRRSYPYRGVRQRPWGRWA-SEIR 118
>01_06_1243 -
35681569-35681712,35681799-35681904,35682054-35682149,
35682234-35682361,35683000-35683260,35683343-35683428,
35683524-35683616,35683720-35683815,35683946-35684300
Length = 454
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 485 SAKAVAGFIEWLNRTSGSKVSQYHLVGHSLGGHQV 589
++ A A + WL R K ++++ G S GH V
Sbjct: 151 ASDAYAFLVNWLERFPQYKYREFYIAGESYAGHYV 185
>01_05_0062 +
17755460-17755522,17756878-17756953,17757074-17757145,
17757274-17757361,17757793-17758033,17759461-17759576,
17759804-17760021,17760210-17760241,17760338-17760440,
17760531-17760805
Length = 427
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 116 RYQHVQ-GPDGLHLEDLWLKVKDQKESDQYEPERDNAYHL 232
+YQH+Q G G+ L+ +W + +DQ +R +H+
Sbjct: 178 KYQHIQKGKIGILLDFVWYEGLTNSTADQAAAQRSRDFHV 217
>01_01_0404 +
3053558-3053939,3054028-3054123,3054217-3054309,
3054432-3054517,3054633-3054896,3055076-3055203,
3055306-3055401,3055580-3055685,3055778-3055942
Length = 471
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 500 AGFIEWLNRTSGSKVSQYHLVGHSLGGHQV 589
A + WL R K +++ G S GGH V
Sbjct: 165 AFLVNWLERFPQYKYRDFYIAGESYGGHYV 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,919,222
Number of Sequences: 37544
Number of extensions: 525145
Number of successful extensions: 1535
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1533
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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