Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19a03f
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1832|AAF50148.1|  127|Drosophila melanogaster CG8009-PA...   178   3e-45
AY069435-1|AAL39580.1|  131|Drosophila melanogaster LD14173p pro...   172   2e-43
AE014296-1831|AAN11906.1|  131|Drosophila melanogaster CG8009-PB...   172   2e-43
AE014298-3223|EAL24566.1|  123|Drosophila melanogaster CG41106-P...    78   8e-15
BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p pro...    28   8.4  
AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-P...    28   8.4  

>AE014296-1832|AAF50148.1|  127|Drosophila melanogaster CG8009-PA,
           isoform A protein.
          Length = 127

 Score =  178 bits (434), Expect = 3e-45
 Identities = 77/125 (61%), Positives = 104/125 (83%)
 Frame = +1

Query: 55  LEQTACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLT 234
           +E +AC+DLKAFERRLTEV++  +P+T RWRI+L+ +S+CTAI+A++WL DP T VV LT
Sbjct: 1   MEPSACEDLKAFERRLTEVVSSYRPSTFRWRIVLSAMSMCTAISAWYWLRDPRTTVVPLT 60

Query: 235 QSLWNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPR 414
           +SLW HP F V +  LV+LF++G+ + V+AP IIT+RTR +L DFNMSCDDTGKLILKPR
Sbjct: 61  ESLWIHPVFTVATLTLVVLFILGIQKLVIAPQIITSRTRMVLGDFNMSCDDTGKLILKPR 120

Query: 415 PANSS 429
            +N++
Sbjct: 121 QSNNN 125


>AY069435-1|AAL39580.1|  131|Drosophila melanogaster LD14173p
           protein.
          Length = 131

 Score =  172 bits (419), Expect = 2e-43
 Identities = 78/129 (60%), Positives = 103/129 (79%), Gaps = 4/129 (3%)
 Frame = +1

Query: 55  LEQTACDDLKAFERRLTEVIACLQPATMRWRILLTIV----SVCTAIAAYHWLMDPLTPV 222
           +E +AC+DLKAFERRLTEV++  +P+T RWR LL +V    S+CTAI+A++WL DP T V
Sbjct: 1   MEPSACEDLKAFERRLTEVVSSYRPSTFRWRKLLAVVLSAMSMCTAISAWYWLRDPRTTV 60

Query: 223 VSLTQSLWNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLI 402
           V LT+SLW HP F V +  LV+LF++G+ + V+AP IIT+RTR +L DFNMSCDDTGKLI
Sbjct: 61  VPLTESLWIHPVFTVATLTLVVLFILGIQKLVIAPQIITSRTRMVLGDFNMSCDDTGKLI 120

Query: 403 LKPRPANSS 429
           LKPR +N++
Sbjct: 121 LKPRQSNNN 129


>AE014296-1831|AAN11906.1|  131|Drosophila melanogaster CG8009-PB,
           isoform B protein.
          Length = 131

 Score =  172 bits (419), Expect = 2e-43
 Identities = 78/129 (60%), Positives = 103/129 (79%), Gaps = 4/129 (3%)
 Frame = +1

Query: 55  LEQTACDDLKAFERRLTEVIACLQPATMRWRILLTIV----SVCTAIAAYHWLMDPLTPV 222
           +E +AC+DLKAFERRLTEV++  +P+T RWR LL +V    S+CTAI+A++WL DP T V
Sbjct: 1   MEPSACEDLKAFERRLTEVVSSYRPSTFRWRKLLAVVLSAMSMCTAISAWYWLRDPRTTV 60

Query: 223 VSLTQSLWNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLI 402
           V LT+SLW HP F V +  LV+LF++G+ + V+AP IIT+RTR +L DFNMSCDDTGKLI
Sbjct: 61  VPLTESLWIHPVFTVATLTLVVLFILGIQKLVIAPQIITSRTRMVLGDFNMSCDDTGKLI 120

Query: 403 LKPRPANSS 429
           LKPR +N++
Sbjct: 121 LKPRQSNNN 129


>AE014298-3223|EAL24566.1|  123|Drosophila melanogaster CG41106-PA
           protein.
          Length = 123

 Score = 77.8 bits (183), Expect = 8e-15
 Identities = 41/120 (34%), Positives = 65/120 (54%)
 Frame = +1

Query: 55  LEQTACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLT 234
           +E T  +DL AFERRL EV+   + +++RWR +L  +  C+AI+A HW+ D       + 
Sbjct: 1   MEDTDQEDLLAFERRLAEVVNTEKRSSLRWRFVLGAIFACSAISACHWVRDAKESESVVF 60

Query: 235 QSLWNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPR 414
           Q L +   FA +   + LL   G +        I   T+ +L+ F ++ D+ G+LIL PR
Sbjct: 61  QILSSQSAFAFSLATICLLIFYGFNHATKQDPSILRDTQEMLSPFRLNIDNQGRLILLPR 120


>BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p
           protein.
          Length = 360

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = -2

Query: 177 CTN*HNCQ*NSPSHCSWLETCYHF 106
           C   H C      HC W+  C HF
Sbjct: 163 CRTCHMCVLKMDHHCPWIVNCVHF 186


>AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-PA
           protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 9/24 (37%), Positives = 10/24 (41%)
 Frame = -2

Query: 177 CTN*HNCQ*NSPSHCSWLETCYHF 106
           C   H C      HC W+  C HF
Sbjct: 141 CRTCHMCVLKMDHHCPWIVNCVHF 164


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,581,434
Number of Sequences: 53049
Number of extensions: 375097
Number of successful extensions: 957
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)