Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19a03f
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    25   0.45 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.4  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    23   2.4  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   5.6  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   7.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.8  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 108 SDSMSPTSY-NEMENSTDNCVSLYSNSSIPLVDGSSDTCSLAHTVFVESSLFCCDLYIIG 284
           +D   P S  N  EN+T +  + Y+N     V+   DT  LA TVF   ++    + +IG
Sbjct: 155 NDKPIPASCCNSPENNTCSISNSYTNGC---VEALKDTVKLAGTVFGSVAIAIAIVELIG 211


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 378 RHVEVIKYGASARCDDARSHYLSMYSN 298
           RH+EVIK      CD   +++  M  N
Sbjct: 209 RHMEVIKIKNFDNCDQRINYHFGMTDN 235


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 111 DSMSPTSYNEMENSTDNCVSLYSNS 185
           D  +PT + EM+    N  SL S +
Sbjct: 27  DKRAPTGHQEMQGKEKNSASLNSEN 51


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 189 CCYCCTN 169
           CC+CC N
Sbjct: 12  CCWCCDN 18


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 510 FFFKIKTSLFLYLIF 466
           FF  IKT +F+Y  F
Sbjct: 95  FFMMIKTPIFIYNSF 109


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +3

Query: 81  ESF*ASFN*SDSMSPTSYNEMENSTDNCVSLYSNSSIPLVDGSSDTCSL 227
           ES+ AS + SDS+S T    ++ S+ +  S  + SS  +   +S  C +
Sbjct: 41  ESYDASSSNSDSLSMTIPPSIDRSSIHEESYLAESSRSIDPCASKYCGI 89


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 307 HRKVVAPSIITARTRSILNDFN 372
           HRK++AP+      +S ++ FN
Sbjct: 137 HRKLIAPTFHLNVLKSFIDLFN 158


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 147 SPSHCSWLETCYH 109
           S S C+W  T YH
Sbjct: 66  SGSKCTWTITSYH 78


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,284
Number of Sequences: 438
Number of extensions: 2333
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)