Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19a01f
(753 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0281 + 2086674-2087652,2089200-2089483 90 2e-18
12_01_0285 + 2120130-2121204,2122842-2123116 89 4e-18
11_01_0277 + 2060328-2061061,2061360-2061420,2061560-2061679,206... 52 4e-07
03_05_1006 + 29635372-29635442,29635544-29635589,29635672-296358... 32 0.43
01_06_0642 + 30811708-30811768,30812256-30812305,30812455-308129... 31 1.3
01_07_0108 - 41126074-41127342 30 1.7
04_04_1448 + 33679110-33679140,33679858-33680057,33680163-336802... 30 2.3
04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532... 30 2.3
12_01_0910 + 8858443-8859414 29 3.0
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 29 3.0
07_01_0577 - 4286048-4286186,4286600-4286660,4286957-4287089,428... 29 3.0
06_03_0468 - 21083754-21083869,21083986-21084069,21085633-210859... 29 3.0
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 29 3.0
03_05_0922 - 28835983-28836129,28836328-28836474,28836782-288369... 29 5.2
02_05_0056 + 25461423-25461708,25461986-25462026,25466047-254660... 29 5.2
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 28 6.9
06_01_0745 + 5570821-5571496,5572205-5572322,5572410-5572571,557... 28 9.2
>11_01_0281 + 2086674-2087652,2089200-2089483
Length = 420
Score = 90.2 bits (214), Expect = 2e-18
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = +1
Query: 403 VLLALHDRAPQLRVAEDRLAVTGDRGYCTVRATHGVSRGSWYWEACVEELPEXXXXXXXX 582
VLL+ ++ ++ V++DRL +GY VRAT GV+ G+WY+E V L
Sbjct: 176 VLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRATRGVAAGAWYFEVKVLHLGSTGHTRLGW 235
Query: 583 XXXXXNLQAPLGYDKFGYSWRSRKGTRFHES-RGKHYSGAYGEGDTLGFLIVLPD 744
++ AP+GYD FG+ +R GT+ H++ R + YGEGD LGF I LPD
Sbjct: 236 ATNNADIHAPVGYDVFGFGYRDMDGTKVHKAWRANYADQGYGEGDVLGFYIHLPD 290
>12_01_0285 + 2120130-2121204,2122842-2123116
Length = 449
Score = 89.0 bits (211), Expect = 4e-18
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = +1
Query: 403 VLLALHDRAPQLRVAEDRLAVTGDRGYCTVRATHGVSRGSWYWEACVEELPEXXXXXXXX 582
VLL+ ++ ++ V++DRL +GY VRAT GV+ G+WY+E V L
Sbjct: 173 VLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRATRGVAAGAWYFEVKVLHLGSTGHTRLGW 232
Query: 583 XXXXXNLQAPLGYDKFGYSWRSRKGTRFHES-RGKHYSGAYGEGDTLGFLIVLPD 744
++ AP+GYD FG+ +R GT+ H++ R + YG+GD LGF I LPD
Sbjct: 233 ATNNADIHAPVGYDVFGFGYRDMDGTKVHKAWRANYAEQGYGDGDVLGFYIHLPD 287
>11_01_0277 +
2060328-2061061,2061360-2061420,2061560-2061679,
2061947-2062112,2062229-2062635
Length = 495
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 598 NLQAPLGYDKFGYSWRSRKGTRFHES-RGKHYSGAYGEGDTLGFLIVLPD 744
++ AP+GY FG+ +R GT+ H++ R + YGEGD LGF I LPD
Sbjct: 400 DIHAPVGYYVFGFGYRDMDGTKVHKAWRSNYADQGYGEGDVLGFYIHLPD 449
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +1
Query: 403 VLLALHDRAPQLRVAEDRLAVTGDRGYCTVRATHGVSRGSWYWEACVEEL 552
VLL+ ++ ++ V++DRL +GY VRAT GV+ G+WY+E V L
Sbjct: 174 VLLSRVFKSDKVEVSDDRLTAGSTKGYRMVRATRGVAAGAWYFEVKVLHL 223
>03_05_1006 +
29635372-29635442,29635544-29635589,29635672-29635813,
29635878-29636653,29636750-29637370
Length = 551
Score = 32.3 bits (70), Expect = 0.43
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +2
Query: 131 RAGKVSAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTK 274
R GKV A+ PG P RK P P P ATP + P+ +
Sbjct: 476 RVGKVGISFE-VAKDAPGWPPVRKTSVPAPPAEAAPAVATPAAPPAAE 522
>01_06_0642 +
30811708-30811768,30812256-30812305,30812455-30812926,
30813237-30813596,30813694-30814101,30814383-30814453,
30814553-30814629,30814741-30814888,30815878-30816039,
30816119-30816304
Length = 664
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 238 SHGYPTEHPFNKDGYRYILAEPDPHAPFRQEFDESNEWSGKPIPGWLYRPLCPGGVLLAL 417
SHGYP + GY +L P+ A F F E N G+ G +Y+ + P L+A+
Sbjct: 333 SHGYPYSPADSAIGYSRMLFTPENLAEFTNGFAEQN-LLGEGGFGCVYKGILPDNRLVAV 391
>01_07_0108 - 41126074-41127342
Length = 422
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = +1
Query: 145 KRRPAVGSAAETGAPIGKKGRNADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFR 324
+R P + G I K + + LP+HG P + Y PD + PF
Sbjct: 236 RRSPELAGGNGGGYYITAKSIEVNHHQVPLPNHGAPLVVQLSSM-VPYTELRPDVYGPFV 294
Query: 325 QEFDESNEWSGKPIP 369
+ +DE +W K P
Sbjct: 295 KAWDEILQWPKKVAP 309
>04_04_1448 +
33679110-33679140,33679858-33680057,33680163-33680272,
33680372-33680591,33680672-33680794,33680892-33680960,
33681915-33682157,33682235-33682297,33682414-33682477,
33682740-33682810
Length = 397
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 146 SAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPS 268
SAGL+S A P P +PS+ K RT TP ++PS
Sbjct: 155 SAGLQSPAMPSPSVPSSTKWGPFSGTKGKKTRTNTPLAVPS 195
>04_04_1057 -
30451759-30452523,30452627-30452701,30453180-30453254,
30453503-30453591,30454058-30454157,30454244-30454388,
30454609-30454658,30455033-30455114,30455200-30455282,
30455360-30455429,30455523-30455632,30455719-30455872,
30456639-30456796,30457338-30457517
Length = 711
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +1
Query: 115 LAGNVKGRQGKRRPAVGSAAETGAPIGKKGRN-ADVTALKLPSHGYPTEHPFNKDG 279
+ N G G PA G G+P+GK + + L +P H YP++H + G
Sbjct: 571 IPSNSTGMHGSGSPASGGIH--GSPLGKTPSSYSKRRGLPMPPHEYPSQHGQGRHG 624
>12_01_0910 + 8858443-8859414
Length = 323
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 209 LRPFLPMGAPVSAALPTAGLRLPCLPFTLPASGTAII-SSRC 87
L P LP+ P++AAL GL L +PF A A++ SS C
Sbjct: 158 LLPLLPLPFPLTAALAVLGLLL-LVPFWSLAGAAAVVESSAC 198
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 205 RNADVTALKLPSHGYPTEHPFNKDGYRYILAEPD 306
+N LKL S G+ E+ ++ GYRY+L +PD
Sbjct: 382 QNIVTLELKL-SRGWGGENAYHVGGYRYLLVDPD 414
>07_01_0577 -
4286048-4286186,4286600-4286660,4286957-4287089,
4287286-4287350,4288346-4288451,4288529-4288750,
4289619-4289852,4289948-4290037,4290605-4291507
Length = 650
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 158 RSAARPRPGLPSARKAVTPMSPL*NCPRTATPPSIPSTKTVTDTS 292
R AA P P P AV P P+ P +TPP+ P T+ S
Sbjct: 50 RHAATPPPPPPPPTPAVEPTLPI---PPASTPPTPPQPSASTEPS 91
>06_03_0468 -
21083754-21083869,21083986-21084069,21085633-21085920,
21087525-21087687
Length = 216
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 334 DESNEWSGKPIPGWLYRP 387
D S +GKPIPGW+ RP
Sbjct: 130 DLSTRLTGKPIPGWVNRP 147
>04_03_0826 + 20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 285 SVTVFVEGMLGGVAVRGQFQSGDIGVTAFLADGSPGLGRAADRRPALTLP 136
+VT VE ++ + GQF+ GD + A G P L R D+ L+ P
Sbjct: 928 AVTQLVEDVISEAILSGQFKPGDTIMVDTDATGKPCLSRLNDQTVQLSDP 977
>03_05_0922 -
28835983-28836129,28836328-28836474,28836782-28836910,
28837201-28837278,28841639-28841812
Length = 224
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 349 WSGKPIPGWLYR 384
W GKPIP WLY+
Sbjct: 110 WDGKPIPYWLYK 121
>02_05_0056 +
25461423-25461708,25461986-25462026,25466047-25466083,
25466451-25466594,25466882-25466974,25467067-25467155,
25467241-25467537,25467629-25467765,25467860-25467952,
25468061-25468166,25468243-25468395
Length = 491
Score = 28.7 bits (61), Expect = 5.2
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 478 GYCTVRATHGVSRGSWYWEACVEELPEXXXXXXXXXXXXXNLQAPLGYDKF-GYSWRSRK 654
GY TV THG + W++EA + N++ YD F Y+ R+ +
Sbjct: 61 GYVTVNETHGRALFYWFFEATA--AADKKPLVLWLNGGIFNIKK---YDTFLPYAGRTPE 115
Query: 655 GTRFHESRGKHYSGAYGEGDTLG-FLI 732
R E G G YGE + LG FL+
Sbjct: 116 RDRERERPGCSSVG-YGEAEELGPFLV 141
>03_05_0640 -
26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 134 AGKVSAGLRSAARPRPGLPSARKAVTPMSPL*NCPRTATP 253
+G+ A R+AA P+P P+A A M+P + A+P
Sbjct: 61 SGQRDAAARAAAAPKPARPAAGAAKNFMAPTISAASKASP 100
>06_01_0745 +
5570821-5571496,5572205-5572322,5572410-5572571,
5572650-5572681,5573406-5573584,5573697-5573897
Length = 455
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 341 LSSNSCLKGACGSGSAKMYL*P-SLLKGCS 255
L++ +C++ +CG G K+Y P SL CS
Sbjct: 249 LTAGNCVQCSCGPGDLKLYCTPASLTASCS 278
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.136 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,109,635
Number of Sequences: 37544
Number of extensions: 390396
Number of successful extensions: 1633
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2004270760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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