Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19a01f
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    27   0.47 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    27   0.47 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.4  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   3.3  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   3.3  

>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +1

Query: 610 PLGYDK-FGYSWRSRKG---TRFHESRGKHYSGAYGEGDTLGFLI 732
           P+GYDK F  ++ S+     T F+    KH+ G YG+ D LG ++
Sbjct: 358 PVGYDKNFDDNFTSKVDLPYTTFNCGEQKHFPGLYGDED-LGCMV 401


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = +1

Query: 610 PLGYDK-FGYSWRSRKG---TRFHESRGKHYSGAYGEGDTLGFLI 732
           P+GYDK F  ++ S+     T F+    KH+ G YG+ D LG ++
Sbjct: 366 PVGYDKNFDDNFTSKVDLPYTTFNCGEQKHFPGLYGDED-LGCMV 409


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 167 ARPRPGLPSARKAVTPMSPL*NCPRTATP 253
           ARP PG+P   + + P   +   PRT TP
Sbjct: 179 ARPNPGMPPGPQMMRPPGNV-GPPRTGTP 206


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 247 YPTEHPFNKDGYRYILAEPD 306
           +P+  PFNK G+ +   EP+
Sbjct: 25  FPSSRPFNKTGFEFGAWEPN 44


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 247 YPTEHPFNKDGYRYILAEPD 306
           +P+  PFNK G+ +   EP+
Sbjct: 25  FPSSRPFNKTGFEFGAWEPN 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.136    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,599
Number of Sequences: 2352
Number of extensions: 13789
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)