Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19a01f
(753 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical ... 138 4e-33
AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical ... 138 4e-33
AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical ... 39 0.004
AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.29
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 30 1.5
U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical p... 30 2.0
U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical pr... 30 2.0
AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical ... 30 2.0
Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 29 2.7
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 29 2.7
Z99171-7|CAB16312.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 4.7
AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger p... 29 4.7
AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical ... 28 6.2
AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical ... 28 6.2
Z82267-2|CAB05190.1| 410|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 28 8.2
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 28 8.2
U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical p... 28 8.2
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 28 8.2
>AL023828-3|CAA19468.1| 572|Caenorhabditis elegans Hypothetical
protein Y17G7B.2b protein.
Length = 572
Score = 138 bits (334), Expect = 4e-33
Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Frame = +1
Query: 139 QGKRRPAVGSAAETGAPI-GKKGR-NADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPH 312
+G + AP+ GKK + AD ++ P+ G + PF+KD YRY L E DP+
Sbjct: 215 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 273
Query: 313 APFRQEFDESNEWSGKPIPGWLYRPLCPGGVLLALHDRAPQLRVAEDRLAVTGDRGYCTV 492
P +++ N+ S IP + YR L V ++ +DRA QL + + ++TG GY
Sbjct: 274 VPEDPAWNQ-NQSSAYVIPSFHYRELLNPTVNVSSNDRAFQLSINGN--SITGFEGYSMA 330
Query: 493 RATHGVSRGSWYWEACVEELPEXXXXXXXXXXXXXNLQAPLGYDKFGYSWRSRKGTRFHE 672
RA+HGVS+G+WY+E ++ P+ +LQA +GY+KF Y WRS+ GT+FHE
Sbjct: 331 RASHGVSKGTWYFEVNFDDQPDDSHIRIGWSQSYASLQACVGYNKFSYGWRSKHGTKFHE 390
Query: 673 SRGKHYS-GAYGEGDTLGFLIVLP 741
++GK Y G + +GD LG LI LP
Sbjct: 391 AKGKKYHFGGFKQGDVLGCLIHLP 414
>AL023828-2|CAA19449.1| 570|Caenorhabditis elegans Hypothetical
protein Y17G7B.2a protein.
Length = 570
Score = 138 bits (334), Expect = 4e-33
Identities = 78/204 (38%), Positives = 116/204 (56%), Gaps = 3/204 (1%)
Frame = +1
Query: 139 QGKRRPAVGSAAETGAPI-GKKGR-NADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPH 312
+G + AP+ GKK + AD ++ P+ G + PF+KD YRY L E DP+
Sbjct: 213 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 271
Query: 313 APFRQEFDESNEWSGKPIPGWLYRPLCPGGVLLALHDRAPQLRVAEDRLAVTGDRGYCTV 492
P +++ N+ S IP + YR L V ++ +DRA QL + + ++TG GY
Sbjct: 272 VPEDPAWNQ-NQSSAYVIPSFHYRELLNPTVNVSSNDRAFQLSINGN--SITGFEGYSMA 328
Query: 493 RATHGVSRGSWYWEACVEELPEXXXXXXXXXXXXXNLQAPLGYDKFGYSWRSRKGTRFHE 672
RA+HGVS+G+WY+E ++ P+ +LQA +GY+KF Y WRS+ GT+FHE
Sbjct: 329 RASHGVSKGTWYFEVNFDDQPDDSHIRIGWSQSYASLQACVGYNKFSYGWRSKHGTKFHE 388
Query: 673 SRGKHYS-GAYGEGDTLGFLIVLP 741
++GK Y G + +GD LG LI LP
Sbjct: 389 AKGKKYHFGGFKQGDVLGCLIHLP 412
>AL023828-4|CAA19469.1| 462|Caenorhabditis elegans Hypothetical
protein Y17G7B.2c protein.
Length = 462
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 139 QGKRRPAVGSAAETGAPI-GKKGR-NADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPH 312
+G + AP+ GKK + AD ++ P+ G + PF+KD YRY L E DP+
Sbjct: 213 EGPKTRGASKRRHAEAPVTGKKQKLAADYSSTAAPN-GVQIDIPFSKDNYRYYLTEVDPN 271
Query: 313 AP 318
P
Sbjct: 272 VP 273
>AF000261-1|AAB52922.1| 505|Caenorhabditis elegans Hypothetical
protein F19B10.11 protein.
Length = 505
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1
Query: 223 ALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFRQEFDESNEWSGKPI 366
A + P+ + E +++GY ++ PDP A FR E DE EW+ +P+
Sbjct: 14 ASEFPTVSWSREEEASQNGYSFMDHYPDPEATFRCE-DE--EWNPRPV 58
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 146 SAGLRSAARPRPGLP--SARKAVTPMSPL*NCPRTATPPSIPSTKT 277
SA AAR RP +P SA +A+T +P T T + P+T+T
Sbjct: 303 SASTTGAARTRPAVPAVSAPRALTSRAPAGPARPTTTRSATPATRT 348
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 146 SAGLRSAARPRPGLP--SARKAVTPMSPL*NCPRTATPPSIPSTKT 277
SA AAR RP +P SA +A+T +P T T + P+T+T
Sbjct: 325 SASTTGAARTRPAIPAVSAPRALTSRAPTGPACPTTTRSAAPATRT 370
>U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical
protein F10G7.9b protein.
Length = 644
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +1
Query: 124 NVKGRQGKRRPAVGSAAETGAPIGKKGRNADVTALKLPSHGYPTEHPFNKDGYRYI-LAE 300
N G + + RP+ A G G++ N+D+ L+ H +P N + Y I L++
Sbjct: 8 NGNGGERQMRPSPSEAVIFGINNGQQAINSDIARLQSLVHHSRDYYPSNIEHYPPIPLSQ 67
Query: 301 P----DPHAPFRQEFDESNEWS-GKPIPGWLYRPLCPGGVLLALHD 423
P +P P D + P P + +P+ P + + HD
Sbjct: 68 PCHFFNPPPPSLMSLDLHQQMMLPPPPPAPIIQPISPTPLPASFHD 113
>U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical
protein F10G7.9a protein.
Length = 727
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +1
Query: 124 NVKGRQGKRRPAVGSAAETGAPIGKKGRNADVTALKLPSHGYPTEHPFNKDGYRYI-LAE 300
N G + + RP+ A G G++ N+D+ L+ H +P N + Y I L++
Sbjct: 91 NGNGGERQMRPSPSEAVIFGINNGQQAINSDIARLQSLVHHSRDYYPSNIEHYPPIPLSQ 150
Query: 301 P----DPHAPFRQEFDESNEWS-GKPIPGWLYRPLCPGGVLLALHD 423
P +P P D + P P + +P+ P + + HD
Sbjct: 151 PCHFFNPPPPSLMSLDLHQQMMLPPPPPAPIIQPISPTPLPASFHD 196
>AL132943-1|CAC14390.1| 1042|Caenorhabditis elegans Hypothetical
protein Y116F11B.3 protein.
Length = 1042
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 285 SVTVFVEGMLGGVAVRGQFQSGDIGVTAFLADGSPGLGRAADRRPA--LTLPALHVA 121
S VF+ G + V G F S D V ++L DGS AD PA +P L VA
Sbjct: 923 SNVVFINGNIDPYHVLGLFNSPDSSVVSYLIDGS---SHCADMFPARDSDVPGLKVA 976
>Z69383-4|CAA93411.2| 326|Caenorhabditis elegans Hypothetical
protein F13E9.9 protein.
Length = 326
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +1
Query: 157 AVGSAAETGAPIGKKGRNADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFRQEFD 336
++ A++ P GKK +N D+T P E+ + R+ E H Q+F
Sbjct: 222 SIPGKAKSILPGGKK-KNGDITLNDYTQDSSPQENHLHVHRDRHYHDERHAHQDDSQQFS 280
Query: 337 ESNEWSG 357
N+W G
Sbjct: 281 VYNDWDG 287
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 136 RQGKRRPAVGSAAETGAPIGKKGR 207
++G+ RPA +A+ G+P+ KKGR
Sbjct: 165 KKGRGRPAKNPSADAGSPLVKKGR 188
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 121 GNVKGRQGKRRPAVGSAAETGAPIGKKGR 207
G+ ++G+ RP +A+ G+P+ KKGR
Sbjct: 115 GSSPVKKGRGRPIKNPSADAGSPLVKKGR 143
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 136 RQGKRRPAVGSAAETGAPIGKKGR 207
++G+ RPA +A+ G+P+ KKGR
Sbjct: 165 KKGRGRPAKNPSADAGSPLVKKGR 188
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 121 GNVKGRQGKRRPAVGSAAETGAPIGKKGR 207
G+ ++G+ RP +A+ G+P+ KKGR
Sbjct: 115 GSSPVKKGRGRPIKNPSADAGSPLVKKGR 143
>Z99171-7|CAB16312.1| 188|Caenorhabditis elegans Hypothetical
protein F47G4.8 protein.
Length = 188
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 724 SPACRPRRTHRCSACLGTRGTWSPCDSAT 638
+P+ R R T +CS LG G + PC S T
Sbjct: 88 APSPRARLTSQCSPGLGGFGVYRPCTSRT 116
>Z66524-1|CAA91420.2| 500|Caenorhabditis elegans Hypothetical
protein T13H5.4 protein.
Length = 500
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 298 EPDPHAPFRQEFDESNEWSGKPIPGWLYR 384
E D AP+ + + W GKPIP WLY+
Sbjct: 370 EIDESAPYNPK-NLPLGWDGKPIPYWLYK 397
>Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical
protein T23G4.1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 227 RAVTSALRPFLPMGAPVSAALPT---AGLRLPCLPFTLPASGTAIISSR 90
R+ T+ F P G PV+ A PT G+ + P LP S A+ S+R
Sbjct: 298 RSSTTTPHRFNPYGKPVAPAPPTMQQMGMNMAMNPLVLPFSLQAMYSNR 346
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 175 RPRCRPQACAYLACPSRCR 119
RP+ + C L CPSRCR
Sbjct: 220 RPKVEARPCPMLICPSRCR 238
>AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger
protein TLP-1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = -2
Query: 227 RAVTSALRPFLPMGAPVSAALPT---AGLRLPCLPFTLPASGTAIISSR 90
R+ T+ F P G PV+ A PT G+ + P LP S A+ S+R
Sbjct: 298 RSSTTTPHRFNPYGKPVAPAPPTMQQMGMNMAMNPLVLPFSLQAMYSNR 346
>AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical
protein W09G10.3 protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +3
Query: 210 RRCHRSETALARLPH-RASLQQRRLQIHLGGTRPAR-----ALQTGVRREQ 344
RR R+ + R P RAS +QR L+ H G +P + A+ G+RR Q
Sbjct: 11 RRSTRNAVSRMRKPKPRASAKQRSLERHFGSRQPTKNKFLNAIYWGIRRCQ 61
>AC024765-5|AAF60527.3| 975|Caenorhabditis elegans Hypothetical
protein Y39A3CR.3 protein.
Length = 975
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -2
Query: 251 G*PCEGSFRAVTSALRPFLPMGAPVSAALPTAGLRLPCLPFTLPASGTA 105
G P G + A P +PM P+S+ALP +P T+ SG A
Sbjct: 728 GTPSLGRELSTPLATTPLIPMNFPLSSALPVIS-AIPSNASTMDLSGAA 775
>Z82267-2|CAB05190.1| 410|Caenorhabditis elegans Hypothetical
protein F38C2.4 protein.
Length = 410
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +1
Query: 205 RNADVTALKLPSHGYPTEHP-----FNKDGYRYILAEPDPHAPFRQEFDESNEW 351
R+ V + + HG+PT H +K G+R EP+P F E+ NE+
Sbjct: 340 RDFYVCQILIEIHGFPTIHLALLKIMSKYGFRIFNVEPNPQCYFCCEYSLINEF 393
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 27.9 bits (59), Expect = 8.2
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 3/116 (2%)
Frame = +1
Query: 406 LLALHDRAPQLRVAEDRLAVTGD-RGYCTVRATHGVSRGSWYWEACVEELPEXXXXXXXX 582
+L D + L++ D L D + +VR T V G WY+EA V
Sbjct: 355 MLNHEDVSEYLKIGPDGLEARCDVSSFESVRCTFEVMDGVWYYEATVLTSGVMQIGLATK 414
Query: 583 XXXXXNLQA-PLGYDKFGYSWRS-RKGTRFHESRGKHYSGAYGEGDTLGFLIVLPD 744
N + +G D ++ R+ ++ KH + GD +G L+ +P+
Sbjct: 415 RSRFLNHEGYGIGDDASSVAYDGCRQLVWYNAKSHKHEHENWQPGDVIGVLLNIPE 470
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 27.9 bits (59), Expect = 8.2
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Frame = +1
Query: 442 VAEDRLAVTGD--RGYCTVRATHGVSRGSWYWEACVEELPEXXXXXXXXXXXXXNLQAPL 615
VAE L D R Y AT+ V G WY+E E+ + L
Sbjct: 944 VAEKELRARKDNTRTY-RAEATYAVCGGKWYFEF---EILTAGYMKIGWMDIGSTPEIQL 999
Query: 616 GYDKFGYSWRSRKGTRFHESRGKHYSGAYGEGDTLGFLIVLPD 744
G D Y++ G ++H+ + Y + GD +G + L D
Sbjct: 1000 GADDRSYAFDGYLGRKWHQG-AETYGKEWKIGDVVGCFLDLND 1041
>U23511-12|AAC46798.2| 610|Caenorhabditis elegans Hypothetical
protein C32D5.10 protein.
Length = 610
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = -2
Query: 239 EGSFRAVTSALRPFLPMGAPVSAALPTAGLRLPCLPFTLPASGTAIISSRCSN 81
+ R +A PF P PV + LP AG +P T ++G SR S+
Sbjct: 395 QAPLRLGPNATNPFRPAPLPVPSQLPIAG--IPWAELTTSSAGAGSARSRGSD 445
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 27.9 bits (59), Expect = 8.2
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Frame = +1
Query: 442 VAEDRLAVTGD--RGYCTVRATHGVSRGSWYWEACVEELPEXXXXXXXXXXXXXNLQAPL 615
VAE L D R Y AT+ V G WY+E E+ + L
Sbjct: 1065 VAEKELRARKDNTRTY-RAEATYAVCGGKWYFEF---EILTAGYMKIGWMDIGSTPEIQL 1120
Query: 616 GYDKFGYSWRSRKGTRFHESRGKHYSGAYGEGDTLGFLIVLPD 744
G D Y++ G ++H+ + Y + GD +G + L D
Sbjct: 1121 GADDRSYAFDGYLGRKWHQG-AETYGKEWKIGDVVGCFLDLND 1162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.136 0.438
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,910,883
Number of Sequences: 27780
Number of extensions: 280628
Number of successful extensions: 914
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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