Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19a01f
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   2.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   5.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.1  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    21   9.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.4  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    21   9.4  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 307 PHAPFRQEFDESNEWSGKPIPGWLYRPL 390
           P  PF ++ +E + +    +P W  R L
Sbjct: 318 PSYPFEEDINEGSNYMQTRVPAWCDRVL 345


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 239 RTATPPSIPSTKTVTDTS 292
           RT  PP +P  +  TDT+
Sbjct: 637 RTLEPPIMPRVQNATDTT 654


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = +1

Query: 202 GRNADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFRQEFDESNEWSGKPIP 369
           G   ++T+ +  + G P +   ++D YRY+    +  + F  E+       GK  P
Sbjct: 535 GNTVNLTS-RTETTGEPGKINVSEDAYRYLCMPENQDSQFLLEYRGPVTMKGKSEP 589


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = +1

Query: 202 GRNADVTALKLPSHGYPTEHPFNKDGYRYILAEPDPHAPFRQEFDESNEWSGKPIP 369
           G   ++T+ +  + G P +   ++D YRY+    +  + F  E+       GK  P
Sbjct: 535 GNTVNLTS-RTETTGEPGKINVSEDAYRYLCMPENQDSQFLLEYRGPVTMKGKSEP 589


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 319 FRQEFDESNEWSG 357
           F+QEFDE+   SG
Sbjct: 74  FKQEFDETERASG 86


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 619 YDKFGYSWRSRKGTR 663
           Y    Y W +R GTR
Sbjct: 80  YQPISYKWITRSGTR 94


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 319 FRQEFDESNEWSG 357
           F+QEFDE+   SG
Sbjct: 42  FKQEFDETERASG 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.136    0.438 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,489
Number of Sequences: 438
Number of extensions: 3240
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)