Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18p14r
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.16 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.64 
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    22   6.0  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = -3

Query: 633  SRTRSVWTSSPTN*KRPVSSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQ 463
            S T S W ++ T  +   + P T +        NWP+  T    P  V   V   SQ
Sbjct: 1045 STTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQ 1101


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -3

Query: 609 SSPTN*KRPV-SSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQS 460
           +SPT    P  SSPR+++E+P   R+  P+ + NS+  ++  SLV  R  S
Sbjct: 53  ASPTPGDVPTPSSPRSISEDPLNCRD-LPNSRCNSR--ESSDSLVQPRCPS 100



 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = -2

Query: 739  EKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKE 587
            +K++E  G    K    ++   EN+   K+      +DE+     +N  KE
Sbjct: 855  DKAQEADGEVVVKKEVDEEERLENHTSVKIKREAEDRDEDERSFHSNGAKE 905


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 143 FVCVCGLYVECESLVTSQL 199
           F+C+ G+Y E +  V  +L
Sbjct: 8   FICILGVYPEIQEKVYQEL 26


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 119 AYVCVHVLFVCVCGLYVECES 181
           A + + ++ VC+CG  V  ES
Sbjct: 202 ALLIMRLISVCLCGASVHSES 222


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 435 PTTFNSSSSSEILASPD 485
           P  F ++SSS  L SPD
Sbjct: 216 PAEFPTTSSSSALESPD 232


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,041
Number of Sequences: 336
Number of extensions: 2577
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)