Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18p14f
         (662 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.14 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.42 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    25   0.55 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    24   0.97 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.8  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   6.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.0  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 16/57 (28%), Positives = 22/57 (38%)
 Frame = +3

Query: 489  SRTRSVWTSSPTN*KRPVSSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQ 659
            S T S W ++ T  +   + P T +        NWP+  T    P  V   V   SQ
Sbjct: 1045 STTTSPWWTTTTTRRTTTTRPTTTSTTTRPTTTNWPTQGTTIPPPAVVMPEVDKPSQ 1101


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 25.4 bits (53), Expect = 0.42
 Identities = 17/68 (25%), Positives = 35/68 (51%)
 Frame = +2

Query: 299 EEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLE 478
           +E+EK+L+  EAE      K ++  ED +K + +     +   E + +  E+ +  K ++
Sbjct: 217 KEREKELSDDEAE----EEKKEEEGEDKDKDKPKIEDVGED--EDEDTKKEDKKKKKTIK 270

Query: 479 NRAQQDEE 502
            +  +DEE
Sbjct: 271 EKYTEDEE 278


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +3

Query: 513 SSPTN*KRPV-SSPRTLTENPTRFRENWPSLKTNSKSPKTVSSLVTLRSQS 662
           +SPT    P  SSPR+++E+P   R+  P+ + NS+  ++  SLV  R  S
Sbjct: 53  ASPTPGDVPTPSSPRSISEDPLNCRD-LPNSRCNSR--ESSDSLVQPRCPS 100



 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = +2

Query: 383  EKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKE 535
            +K++E  G    K    ++   EN+   K+      +DE+     +N  KE
Sbjct: 855  DKAQEADGEVVVKKEVDEEERLENHTSVKIKREAEDRDEDERSFHSNGAKE 905


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.2 bits (50), Expect = 0.97
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +2

Query: 347 LNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLEN 481
           LNR+V QI++D+E  +  S      + +   + DE  R   + EN
Sbjct: 294 LNREVDQIKQDVEDLKRWSDRIYAAIHQGSVT-DERGRSITLTEN 337


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 205 RGSPRTPEEARPGGGRPDPEQE 270
           RG PRTP + +   G+  P+++
Sbjct: 58  RGPPRTPLQPKLVAGKLKPKRQ 79


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -1

Query: 272 CSCSGSGLPPPGRASSGVRGLPRLPSQHG 186
           C   G   P PG  S  V G P + S HG
Sbjct: 131 CLSGGPKHPDPG--SLQVPGAPMMMSSHG 157


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -3

Query: 108 IFFLIASMVAAFC 70
           +FF +A++ AA+C
Sbjct: 8   LFFAVATLFAAYC 20


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 284 PAPVCSCSGSGLPPPGRASSGVRGLPRLP 198
           P P     G  LPP G   +    LP++P
Sbjct: 153 PNPSIIDPGPALPPAGFLCNNYLPLPQVP 181


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 284 PAPVCSCSGSGLPPPGRASSGVRGLPRLP 198
           P P     G  LPP G   +    LP++P
Sbjct: 153 PNPSIIDPGPALPPTGFLCNNYPPLPQVP 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,588
Number of Sequences: 336
Number of extensions: 2719
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)