Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18p12f
         (731 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_08_0080 - 28208043-28208138,28208187-28208257,28208300-282086...    30   1.6  
02_05_0020 + 25070664-25070692,25070934-25071513,25071605-250718...    29   3.8  
03_04_0161 + 17838466-17838551,17842379-17842445,17842537-178426...    28   6.6  
02_02_0300 - 8746526-8747224,8749033-8749089,8749414-8749650,875...    28   6.6  
09_06_0257 + 21891523-21891578,21891911-21892421,21893021-218930...    28   8.8  
06_01_0614 + 4448129-4448157,4448733-4449231,4449512-4449550,444...    28   8.8  
02_05_1019 - 33549576-33550247,33550885-33551121,33551206-335513...    28   8.8  

>11_08_0080 -
           28208043-28208138,28208187-28208257,28208300-28208603,
           28210483-28211544
          Length = 510

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -1

Query: 308 PAFLSASVHTPLSCEV-CSNLACMSLLCRISSSNVPSLFVRATLQPVSVTTANVAISCVK 132
           PAF+SA  +TP+S  V   N    SL  + +  +    +VRA L P  V   NV +    
Sbjct: 65  PAFISAFANTPISLAVSLPNSDLPSLADKQTGLDTARAWVRANLSPY-VPATNVTLLLAG 123

Query: 131 NSI 123
           N I
Sbjct: 124 NEI 126


>02_05_0020 +
           25070664-25070692,25070934-25071513,25071605-25071817,
           25071918-25072207,25072301-25072412,25072539-25072763,
           25072853-25073464
          Length = 686

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -2

Query: 307 LHSCRLRYTLRSVARSVRTWRAC 239
           LHS R+R+  R  +   RTW AC
Sbjct: 605 LHSARIRHRFRFYSHQWRTWAAC 627


>03_04_0161 +
           17838466-17838551,17842379-17842445,17842537-17842662,
           17842756-17842886,17843121-17843220,17843334-17843466,
           17843500-17843544,17843545-17843608,17843692-17844469,
           17844897-17845229,17845427-17845634,17845733-17845809,
           17846168-17846240,17846343-17846413,17846597-17846716,
           17846815-17846879,17846974-17847124
          Length = 875

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/23 (52%), Positives = 18/23 (78%)
 Frame = -1

Query: 455 FHLYWANQGEPVYVSPALRYSTG 387
           F ++W+ +GEPV VS ALR ++G
Sbjct: 451 FQMHWS-KGEPVIVSDALRLTSG 472


>02_02_0300 -
           8746526-8747224,8749033-8749089,8749414-8749650,
           8750061-8750172,8750258-8750538,8752032-8752244,
           8753105-8753636,8753871-8753899
          Length = 719

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 307 LHSCRLRYTLRSVARSVRTWRAC 239
           LHS +L++T R  ++  RTW AC
Sbjct: 609 LHSKQLQHTFRFYSQQWRTWAAC 631


>09_06_0257 +
           21891523-21891578,21891911-21892421,21893021-21893092,
           21893571-21893875,21894085-21894196,21894514-21894750,
           21894933-21895640
          Length = 666

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 307 LHSCRLRYTLRSVARSVRTWRAC 239
           LHS +L++T R  +   RTW AC
Sbjct: 553 LHSKKLQHTFRFYSHHWRTWAAC 575


>06_01_0614 +
           4448129-4448157,4448733-4449231,4449512-4449550,
           4449590-4449802,4449941-4450227,4450456-4450567,
           4451515-4451751,4451857-4451957,4452285-4452384,
           4452509-4453141
          Length = 749

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 307 LHSCRLRYTLRSVARSVRTWRAC 239
           LHS +L++T R  +   RTW AC
Sbjct: 655 LHSRKLQHTFRYYSHHWRTWAAC 677


>02_05_1019 -
           33549576-33550247,33550885-33551121,33551206-33551317,
           33551998-33552215,33553084-33553194
          Length = 449

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 307 LHSCRLRYTLRSVARSVRTWRAC 239
           LHS RL++T R  +   RTW +C
Sbjct: 348 LHSKRLQHTFRYYSHHWRTWASC 370


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,541,707
Number of Sequences: 37544
Number of extensions: 388631
Number of successful extensions: 1263
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)