Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18p12f
         (731 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    33   0.28 
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      33   0.28 
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    33   0.28 
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    33   0.28 
AF040657-1|AAB95054.1|  758|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z49067-3|CAA88852.3|  591|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z34799-8|CAA84319.3|  591|Caenorhabditis elegans Hypothetical pr...    28   7.8  
U13070-15|AAC46646.1|  366|Caenorhabditis elegans Hypothetical p...    28   7.8  
U13070-14|AAM22057.1|  259|Caenorhabditis elegans Hypothetical p...    28   7.8  
D83739-1|BAA12092.1|  366|Caenorhabditis elegans aldolase Ce2 pr...    28   7.8  

>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 314 HFPAFLSASVHTPLSCEVCSNLACMSLLCRISSSNVPSLFVRATLQPVSVT 162
           H PAFL    H   +C +        L+ +IS+S+ P +    T+ P+SVT
Sbjct: 90  HEPAFLELMKHVDPNCVIPPTNVTKKLVDKISTSSKPQVNYTKTVGPLSVT 140


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 314 HFPAFLSASVHTPLSCEVCSNLACMSLLCRISSSNVPSLFVRATLQPVSVT 162
           H PAFL    H   +C +        L+ +IS+S+ P +    T+ P+SVT
Sbjct: 90  HEPAFLELMKHVDPNCVIPPTNVTKKLVDKISTSSKPQVNYTKTVGPLSVT 140


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 314 HFPAFLSASVHTPLSCEVCSNLACMSLLCRISSSNVPSLFVRATLQPVSVT 162
           H PAFL    H   +C +        L+ +IS+S+ P +    T+ P+SVT
Sbjct: 90  HEPAFLELMKHVDPNCVIPPTNVTKKLVDKISTSSKPQVNYTKTVGPLSVT 140


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 314 HFPAFLSASVHTPLSCEVCSNLACMSLLCRISSSNVPSLFVRATLQPVSVT 162
           H PAFL    H   +C +        L+ +IS+S+ P +    T+ P+SVT
Sbjct: 90  HEPAFLELMKHVDPNCVIPPTNVTKKLVDKISTSSKPQVNYTKTVGPLSVT 140


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 314 HFPAFLSASVHTPLSCEVCSNLACMSLLCRISSSNVPSLFVRATLQPVSVT 162
           H PAFL    H   +C +        L+ +IS+S+ P +    T+ P+SVT
Sbjct: 90  HEPAFLELMKHVDPNCVIPPTNVTKKLVDKISTSSKPQVNYTKTVGPLSVT 140


>AF040657-1|AAB95054.1|  758|Caenorhabditis elegans Hypothetical
           protein T20H9.6 protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 18/48 (37%), Positives = 25/48 (52%)
 Frame = +1

Query: 529 GKLSPLLQTIQTNITISNVILKSAEQNENFHKSIIVDVNGVKIGLIGY 672
           GK    L+T+QTN+  SN   +S  + EN     I DV+   I L+ Y
Sbjct: 359 GKALQTLKTVQTNVQDSN---ESIRRGENDMLKEITDVHSKVIRLVKY 403


>Z49067-3|CAA88852.3|  591|Caenorhabditis elegans Hypothetical
           protein C44F1.1 protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = +1

Query: 490 DAVSLGNNEINETGKLSPLLQTIQTNITISNVI--LKSAEQNENFHKSIIVDVNGVKIGL 663
           D  +  NN    T  + PLL ++ +N+ IS ++    S   NE  H+      +      
Sbjct: 502 DIAAFTNNNSQLTQSIFPLLHSLSSNLDISTLLKSFTSPPTNEEDHEMSDTSGDDPPTSS 561

Query: 664 IGYLTPDTELLKHTEEV 714
           I  L   TE+  H E+V
Sbjct: 562 IASLLQSTEV--HGEDV 576


>Z34799-8|CAA84319.3|  591|Caenorhabditis elegans Hypothetical
           protein C44F1.1 protein.
          Length = 591

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = +1

Query: 490 DAVSLGNNEINETGKLSPLLQTIQTNITISNVI--LKSAEQNENFHKSIIVDVNGVKIGL 663
           D  +  NN    T  + PLL ++ +N+ IS ++    S   NE  H+      +      
Sbjct: 502 DIAAFTNNNSQLTQSIFPLLHSLSSNLDISTLLKSFTSPPTNEEDHEMSDTSGDDPPTSS 561

Query: 664 IGYLTPDTELLKHTEEV 714
           I  L   TE+  H E+V
Sbjct: 562 IASLLQSTEV--HGEDV 576


>U13070-15|AAC46646.1|  366|Caenorhabditis elegans Hypothetical
           protein F01F1.12a protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 490 DAVSLGNNEINETGKLSPLLQTIQTNITISNVILKSAEQNENFHKS 627
           DA++L NNE N       L  T   N  IS VIL      E FH+S
Sbjct: 49  DAINLENNETNRQKYRQLLFTTPNLNQHISGVIL----YEETFHQS 90


>U13070-14|AAM22057.1|  259|Caenorhabditis elegans Hypothetical
           protein F01F1.12b protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 490 DAVSLGNNEINETGKLSPLLQTIQTNITISNVILKSAEQNENFHKS 627
           DA++L NNE N       L  T   N  IS VIL      E FH+S
Sbjct: 49  DAINLENNETNRQKYRQLLFTTPNLNQHISGVIL----YEETFHQS 90


>D83739-1|BAA12092.1|  366|Caenorhabditis elegans aldolase Ce2
           protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 490 DAVSLGNNEINETGKLSPLLQTIQTNITISNVILKSAEQNENFHKS 627
           DA++L NNE N       L  T   N  IS VIL      E FH+S
Sbjct: 49  DAINLENNETNRQKYRQLLFTTPNLNQHISGVIL----YEETFHQS 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,849,806
Number of Sequences: 27780
Number of extensions: 336601
Number of successful extensions: 1094
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)