Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18p06r
(904 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton... 90 9e-18
CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein. 90 9e-18
CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein. 90 9e-18
BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting... 90 9e-18
BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting... 90 9e-18
BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting... 90 9e-18
BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting... 90 9e-18
BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting... 90 9e-18
D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protei... 46 1e-04
CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein. 46 1e-04
BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting... 46 1e-04
BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting... 46 1e-04
BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting... 46 1e-04
AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transportin... 46 1e-04
>M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton
channel subunit protein.
Length = 155
Score = 90.2 bits (214), Expect = 9e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 107 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 90.2 bits (214), Expect = 9e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 107 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 90.2 bits (214), Expect = 9e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 107 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 90.2 bits (214), Expect = 9e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 107 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 90.2 bits (214), Expect = 9e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 107 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 90.2 bits (214), Expect = 9e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 107 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 90.2 bits (214), Expect = 9e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 107 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 90.2 bits (214), Expect = 9e-18
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA+ L
Sbjct: 107 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVALIL 152
>D89052-1|BAA13753.1| 205|Homo sapiens proton-ATPase-like protein
protein.
Length = 205
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 762
G +GIVG AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 152 GVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 32.7 bits (71), Expect = 1.9
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -3
Query: 890 FAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
+ I I G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 67 WGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>CR456972-1|CAG33253.1| 205|Homo sapiens ATP6V0B protein.
Length = 205
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 762
G +GIVG AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 152 GVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 32.7 bits (71), Expect = 1.9
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -3
Query: 890 FAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
+ I I G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 67 WGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>BT007151-1|AAP35815.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit c'' protein.
Length = 205
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 762
G +GIVG AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 152 GVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 32.7 bits (71), Expect = 1.9
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -3
Query: 890 FAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
+ I I G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 67 WGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>BC005876-1|AAH05876.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 762
G +GIVG AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 152 GVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 32.7 bits (71), Expect = 1.9
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -3
Query: 890 FAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
+ I I G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 67 WGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>BC000423-1|AAH00423.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 762
G +GIVG AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 152 GVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 32.7 bits (71), Expect = 1.9
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -3
Query: 890 FAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
+ I I G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 67 WGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
>AL357079-17|CAI16801.1| 205|Homo sapiens ATPase, H+ transporting,
lysosomal 21kDa, V0 subunit b protein.
Length = 205
Score = 46.4 bits (105), Expect = 1e-04
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = -3
Query: 893 GFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAI 762
G +GIVG AQ P LFV ++++ IF +GL+G+IVAI
Sbjct: 152 GVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAI 195
Score = 32.7 bits (71), Expect = 1.9
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -3
Query: 890 FAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 756
+ I I G + + G + PR+ ++ +IF E + +YG+I+AI +
Sbjct: 67 WGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVI 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,093,643
Number of Sequences: 237096
Number of extensions: 2834029
Number of successful extensions: 5802
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5802
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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