Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18p04r
(882 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 102 6e-23
SPBC16A3.12c |||triglyceride lipase-cholesterol esterase |Schizo... 94 3e-20
SPBC14C8.15 |||triglyceride lipase-cholesterol esterase |Schizos... 74 3e-14
SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces po... 30 0.50
SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyce... 28 2.0
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 28 2.0
SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces po... 27 2.7
SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces po... 27 2.7
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 27 3.5
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 27 4.7
SPBC31F10.04c |srb4|med17|mediator complex subunit Srb4|Schizosa... 26 8.2
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 102 bits (245), Expect = 6e-23
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 4/284 (1%)
Frame = -1
Query: 882 YSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTVFWAM 703
YSR H + D D EFW FS ++ D+P IDY LK +G+ +L YIG SQGT +A
Sbjct: 173 YSRQHLRFD-STDKEFWDFSIDDFAQYDIPDTIDYILKTSGQTKLTYIGFSQGTAQAFAS 231
Query: 702 GSLRPEYNSKIIAMQAYAPVAYLEFNANRLLKLIAPHANSIEALTSLIGINELFGRSDFF 523
S+ P N KI ++ A AP + NR++ ++A S++ LFGR
Sbjct: 232 LSIHPLLNDKINSLIALAPAISPKGLHNRVVDAF------VKARPSILFF--LFGRKSIL 283
Query: 522 TNVG--MRFCADGVF--FQAMCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAH 355
+ G F A F A C + LF ++ ++ + V H + +V+ + H
Sbjct: 284 PSAGFWQSFLAPKFFDAVLAYCLSQLFNWSCQNISSYQRL---VSFAHLYSYTSVKCLVH 340
Query: 354 YGQLINNNFFRRYDHGRLKNWRVYRSFTPPRYDLSLITAPVFLHYVDDDIFADVRDVRKL 175
+ Q++ + FR YD+ +L + + + ++ + I P++L + D D++ +
Sbjct: 341 WFQIMRSAEFRMYDNDQLGHDYFLKYYKAAKFPTNNIRTPIYLIWGGSDSLVDIQAMLN- 399
Query: 174 QIELGRPVGMFRVPHATFSHLDFMWGSGAKELLYDRTIQIMRSL 43
P + V ++ HLD +W K+ + ++ +R +
Sbjct: 400 ----ALPAEVEHVKVDSYEHLDMIWADTVKDYVIPPVLRRLRDI 439
>SPBC16A3.12c |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 443
Score = 93.9 bits (223), Expect = 3e-20
Identities = 78/290 (26%), Positives = 133/290 (45%), Gaps = 9/290 (3%)
Frame = -1
Query: 882 YSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTVFWAM 703
YSR H P D EFW FS +++ D+P +DY L+ G+ +L+YIG SQGT A
Sbjct: 161 YSRKHITYKP-KDEEFWNFSLDDMAMFDIPDTVDYILRETGREKLNYIGFSQGTAQAMAA 219
Query: 702 GSLRPEYNSKI---IAM-QAYAPVAYLEFNANRLLKLIAPHANSIEALTSLIGINELFGR 535
S+ P+ N K+ I + AYAP + + + ++K+ + + + L G L
Sbjct: 220 LSINPDLNDKVNIFIGLAPAYAPKGFSNYFVDYIVKV------NPKIMYHLFGRRCLLPS 273
Query: 534 SDFFTNVGMRFCADGVFFQAMCTNMLFAFAGRSEDMHNATMLPVKLG--HTPAGIAVRQI 361
F+ N+ C +F + + ++ F + D+ N ++ G H + +V+ +
Sbjct: 274 VTFWQNI----CYPPIFVKIVDVSLKILF---NWDLSNISLNQKLCGYAHLYSFSSVKSV 326
Query: 360 AHYGQLINNNFFRRYDHG-RLKNWRVYRSFTPPRYDLSLITAPVFLHYVDDDIFADVRDV 184
H+ Q+I N F+ YD L R + P + + I P+ + + D ++ +
Sbjct: 327 VHWLQIIKNCTFQLYDDDMALLAGYGSRHYQVPLFPTNNIKCPMLILWGGKDTLINMEVM 386
Query: 183 RKLQIELGRPVGMFRVPHATFSHLDFMWGSGAKELLYDRTIQIMR--SLG 40
R P V A + HLDF+WG KE ++ I ++ SLG
Sbjct: 387 R-----TALPPHAKEVSIAHYEHLDFLWGQDVKEEVFPVVIDALKHHSLG 431
>SPBC14C8.15 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 73.7 bits (173), Expect = 3e-14
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 1/276 (0%)
Frame = -1
Query: 882 YSRAHTKLDPDNDSEFWKFSWEEIGTRDLPAMIDYTLKVAGKRRLHYIGHSQGTTVFWAM 703
YS + K N +FW FS + I D+P+++ Y L V + +G SQG + +A
Sbjct: 165 YSIKNIKFSSQNP-KFWDFSLDSIAIFDIPSIVKYILSVNSFDSISLVGFSQGAILAFAA 223
Query: 702 GSLRPEYNSKIIAMQAYAPVAYLEFNANRLLKLIAPHANSIEALTSLIGINELFGRSDFF 523
S+ E + + A A AP + + R +K I HANS + L + G N + G + F+
Sbjct: 224 LSIDTELRNSVRAFIALAPAIAPKKYSGRTVKSII-HANS-QLLYLMFGRNSMLGSAVFW 281
Query: 522 TNVGMRFCADGVFFQAMCTNMLFAFAGRSEDMHNATMLPVKLGHTPAGIAVRQIAHYGQL 343
V VF + + + F + +++ + T V H + +V+ H+ Q+
Sbjct: 282 QAV----LYPPVFAKIVDLFLRFFLSWTGKNI-SETQKIVAYSHLYSFTSVKCFVHWAQI 336
Query: 342 INNNFFRRYDHGRLKNWRVYRSFTP-PRYDLSLITAPVFLHYVDDDIFADVRDVRKLQIE 166
+ YD Y + RY + I P+ L Y +D ++ D+ L+ +
Sbjct: 337 TRRKVLQMYDDSPGFKPSYYTNLNRIARYPIENIRLPITLVYGSND---NMVDIETLKTQ 393
Query: 165 LGRPVGMFRVPHATFSHLDFMWGSGAKELLYDRTIQ 58
L ++P+ + HLD + G K+++ + ++
Sbjct: 394 LPPLSQCIQIPN--YEHLDIIMGDTKKDIVIQQVVE 427
>SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 29.9 bits (64), Expect = 0.50
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 262 SWRCETSVNPPIFQTSVIISSEEIVVDELTVMRYLPDSNACGCMS*FHRQHSRIVH 429
SW+ ++S + + SV +SS + V L+V + +S F ++H+RI+H
Sbjct: 65 SWKKDSSNSGKLDTVSVPMSSSDSDVLPLSVALQYGQGSGAALLSQFLKEHTRIIH 120
>SPAC688.04c |gst3||glutathione S-transferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 242
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 750 LHYIGHSQGTTVFWAMGSLRPEYNSKII-AMQAYAPVAYLEFN 625
LH++ +S+ T + W + L+ Y K+ + AP AY + +
Sbjct: 4 LHHLKNSRSTRIVWMLEELKVPYEIKVYDRVDGRAPPAYTKLS 46
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -1
Query: 759 KRRLHYIGHSQGTTVFWAMGSLRPEYNSKI 670
K R+ IGHS G+TV + + SL+P + +I
Sbjct: 391 KGRIFIIGHSLGSTVVFDILSLQPTFVKEI 420
>SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 171
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 395 PSFTGNIVALCMSSLRPAKANNIFVHIAWKN 487
P F N+V C S R A++I + +KN
Sbjct: 123 PVFEDNVVVYCRSGRRSTTASDILTKLGYKN 153
>SPBC342.02 |||glutaminyl-tRNA synthetase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 811
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 222 YVDDDIFADVRDVRKLQIELGRPVGMFRVPH 130
Y+D F + ++ LG+PVG+FR H
Sbjct: 622 YIDRSDFREEASSDFFRLTLGQPVGLFRASH 652
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 443 PAKANNIFVHIAWKNTPSAQNLIPTFVKKSDLPNSSFIPMRLVSASILLACGAIS 607
P N + +W +T SA L P SD P S +P +++ S L C A++
Sbjct: 281 PFSPINPYYAKSWNHTASAPLLPPGLKNGSDYPYLS-VPPDILNDSYLAMCEAVN 334
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 498 ADGVFFQAMCTNMLFAFAGRSEDMHNATMLPVKLGHTPA 382
A+G +++C N+LFA S+ N + VK TPA
Sbjct: 859 AEGEIEESVCDNILFAINNLSQLNFNEKLKDVKDNLTPA 897
>SPBC31F10.04c |srb4|med17|mediator complex subunit
Srb4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 181 KTTDRIGSSSWNVQSTTCN 125
K D IGSS+W+ S CN
Sbjct: 273 KDRDEIGSSTWSWPSQNCN 291
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,695,384
Number of Sequences: 5004
Number of extensions: 79172
Number of successful extensions: 280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 442483990
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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