Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18p02f
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70213-6|CAA94176.1|  167|Caenorhabditis elegans Hypothetical pr...    33   0.15 
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n...    31   0.59 
U80437-8|AAB37623.1|  630|Caenorhabditis elegans Exocyst compone...    29   2.4  
Z81044-9|CAB02812.2|  677|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z70213-6|CAA94176.1|  167|Caenorhabditis elegans Hypothetical
           protein ZK930.7 protein.
          Length = 167

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
 Frame = +1

Query: 10  TRAQSTST-TQMLPPSLQHGFYVLSSIVQRIPTLQPGTQNWFGAEIGRVMVPALADSQDV 186
           +R +S+S  TQ  P ++    +V+S+   + P+L     NW  +E   V  P ++ +  +
Sbjct: 17  SRCESSSILTQNQPTTIASSGFVMSNPNVKSPSLPSSATNW-NSEYS-VTEPTMSPADQI 74

Query: 187 LAPSVYNRGSQILSLIDLFQNLAGSYEP 270
           L  SV  +   ++ L +L Q     Y+P
Sbjct: 75  LKDSVARKKRSMVDLTELNQLYGKGYKP 102


>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 15
           protein.
          Length = 1217

 Score = 31.5 bits (68), Expect = 0.59
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
 Frame = -1

Query: 676 QRLPHPSNRNAFLLHGRNSQGGGSHPHGLTR-GPATSNRQT*SSHFLSSYGNTVHRESGA 500
           QR+P  S +   +   +N  G  SHPH + + GP + NR     H +   G  +      
Sbjct: 579 QRIPQVSPQQMQMQQQQNMNGPPSHPHQMQQGGPQSINRPPSQPHQMQQGGGPMSMNRPP 638

Query: 499 SIDRTHYGGTTL 464
           S      GG  L
Sbjct: 639 SQQMHQQGGPQL 650


>U80437-8|AAB37623.1|  630|Caenorhabditis elegans Exocyst component
           protein 7 protein.
          Length = 630

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
 Frame = +1

Query: 7   LTRAQSTSTTQMLPPSLQHGFYVLSSIVQRIPTL--QPGTQNWFGAEIGRVMVPALADSQ 180
           LT  Q ++T  +LP         L S++++   L   P     F       +   LAD Q
Sbjct: 436 LTAPQGSNTNLLLPKLFARILSALGSMLKKKANLYDDPTLATIFLLNNYNYIAKTLADEQ 495

Query: 181 DVLAPSVYNRGSQILS 228
           D L P++    S ILS
Sbjct: 496 DGLLPAITEMNSNILS 511


>Z81044-9|CAB02812.2|  677|Caenorhabditis elegans Hypothetical
           protein C30H6.6 protein.
          Length = 677

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -1

Query: 292 LEMYQLQRVHRNQLNFERGL*VIKSGTLCCIPMVLGRLV 176
           +E+Y++ +  R  +       V+ SG    IP +LG+L+
Sbjct: 72  VELYEIAKPFRKWIFLGTSFMVVSSGIFLIIPRILGKLI 110


>Z78540-4|CAB01734.2|  624|Caenorhabditis elegans Hypothetical
           protein C33G3.6 protein.
          Length = 624

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 18/66 (27%), Positives = 25/66 (37%)
 Frame = -1

Query: 649 NAFLLHGRNSQGGGSHPHGLTRGPATSNRQT*SSHFLSSYGNTVHRESGASIDRTHYGGT 470
           N +  + RN      H       P  S  Q  ++    SYGNT H+          Y  T
Sbjct: 484 NPYPENSRNFSHQSQHSGRQAEQPYNSYDQFLTNGRTESYGNTNHQSESLEKSNYDYRNT 543

Query: 469 TLEKLL 452
           T+ +LL
Sbjct: 544 TILRLL 549


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,746,534
Number of Sequences: 27780
Number of extensions: 446958
Number of successful extensions: 971
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)