Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18p02f
         (691 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   1.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.7  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   3.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.4  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 17/64 (26%), Positives = 26/64 (40%)
 Frame = +1

Query: 19  QSTSTTQMLPPSLQHGFYVLSSIVQRIPTLQPGTQNWFGAEIGRVMVPALADSQDVLAPS 198
           ++    + + P+   G+Y         P  QP  Q           +  L +S+DVL PS
Sbjct: 199 ETLKAAKRMRPAANWGYYAYPYCYNLTPN-QPSAQCEATTMQENDKMSWLFESEDVLLPS 257

Query: 199 VYNR 210
           VY R
Sbjct: 258 VYLR 261


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 362 FLNVYTPLR*RPPPKISILFCLWGHKF 442
           +LNVY P    P   + ++F + G  F
Sbjct: 107 YLNVYVPADRTPSQSLPVIFWIHGGAF 133


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 362 FLNVYTPLR*RPPPKISILFCLWGHKF 442
           +LNVY P    P   + ++F + G  F
Sbjct: 107 YLNVYVPADRTPSQSLPVIFWIHGGAF 133


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 591 SPCGWLPPPWLFLPCSRNAFRFEGWG 668
           SP   L  P L + CS   +RF+ WG
Sbjct: 535 SPLSLLGGP-LVMVCSAPVWRFQPWG 559


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 90  TTDTHPSTRNAELVRGRNRQGDGTRP 167
           + D HP+ R    +R +   G+GT P
Sbjct: 386 SVDKHPNRRARGQLRTKIESGEGTIP 411


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 529 GNTVHRESGASIDRTHYG 476
           G++VH +SG +  R H G
Sbjct: 382 GSSVHSDSGENNSRGHSG 399


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,706
Number of Sequences: 438
Number of extensions: 6230
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)