Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18p01f
(779 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036053-1|AAH36053.1| 955|Homo sapiens KIAA1505 protein protein. 34 0.66
AK056542-1|BAB71211.1| 450|Homo sapiens protein ( Homo sapiens ... 34 0.66
AK097373-1|BAC05026.1| 340|Homo sapiens protein ( Homo sapiens ... 32 2.7
AY696295-1|AAU10524.1| 292|Homo sapiens cytochrome P450 protein. 31 3.5
Z97630-1|CAB42829.1| 194|Homo sapiens H1 histone family, member... 30 8.1
X03473-1|CAA27190.1| 194|Homo sapiens protein ( Human gene for ... 30 8.1
CR542220-1|CAG47016.1| 194|Homo sapiens H1F0 protein. 30 8.1
CR456502-1|CAG30388.1| 194|Homo sapiens H1F0 protein. 30 8.1
BC029046-1|AAH29046.1| 194|Homo sapiens H1 histone family, memb... 30 8.1
BC000145-1|AAH00145.1| 194|Homo sapiens H1 histone family, memb... 30 8.1
>BC036053-1|AAH36053.1| 955|Homo sapiens KIAA1505 protein protein.
Length = 955
Score = 33.9 bits (74), Expect = 0.66
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +2
Query: 227 LIKEIKQKLKVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTK 406
++KE +K+ P KKM + + +++ K + ++KKL+++ L + S Q + L K
Sbjct: 158 IVKEF-EKITKPGEMEKKMKILRESTEELRK-EIMQKKLEIKNLREDLASKQKQLLKEQK 215
Query: 407 QLKNLTLHQLRNKN---HQMTATVMM 475
+L+ L HQ+ K+ H T V +
Sbjct: 216 ELEELLGHQVVLKDEVAHHQTIPVQI 241
>AK056542-1|BAB71211.1| 450|Homo sapiens protein ( Homo sapiens
cDNA FLJ31980 fis, clone NT2RP7008487, weakly similar to
TRICHOHYALIN. ).
Length = 450
Score = 33.9 bits (74), Expect = 0.66
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +2
Query: 227 LIKEIKQKLKVPVTRAKKMPLRNQQFKQMGKFQQLRKKLKVQILVAPMMSHQNRHLSPTK 406
++KE +K+ P KKM + + +++ K + ++KKL+++ L + S Q + L K
Sbjct: 103 IVKEF-EKITKPGEMEKKMKILRESTEELRK-EIMQKKLEIKNLREDLASKQKQLLKEQK 160
Query: 407 QLKNLTLHQLRNKN---HQMTATVMM 475
+L+ L HQ+ K+ H T V +
Sbjct: 161 ELEELLGHQVVLKDEVAHHQTIPVQI 186
>AK097373-1|BAC05026.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ40054 fis, clone TBAES2000315, weakly similar to
CYTOCHROME P450 4A1 (EC 1.14.15.3). ).
Length = 340
Score = 31.9 bits (69), Expect = 2.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 55 DKNFKMNLTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDIIAKFNQ 234
D FK + +I + N +HQ+ EK+ + ++ K K K +Q LDI+
Sbjct: 234 DLVFKFSSQGQIFSKFNQELHQFTEKVIQDRKESLKDKLKQDTTQKRRQDFLDILLSAKS 293
Query: 235 GN 240
N
Sbjct: 294 EN 295
>AY696295-1|AAU10524.1| 292|Homo sapiens cytochrome P450 protein.
Length = 292
Score = 31.5 bits (68), Expect = 3.5
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 55 DKNFKMNLTTEIQADVNSLVHQYLEKIDKSLAQTFMKKTKAKPRAKNQQTLLDII 219
D FK + +I + N +HQ+ EK+ + ++ K K K +Q LDI+
Sbjct: 234 DLVFKFSSQGQIFSKFNQELHQFTEKVIQDRKESLKDKLKQDTTQKRRQDFLDIL 288
>Z97630-1|CAB42829.1| 194|Homo sapiens H1 histone family, member 0
protein.
Length = 194
Score = 30.3 bits (65), Expect = 8.1
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 KVPATKKKAEXXXXXXXXXEPPKQASKP-NQAVKKLNITPAKKQEXXXXXXXXXXVTSKP 492
K AT KKA K + P +A KKL TP KK + SKP
Sbjct: 115 KKVATPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATP-KKAKKPKTVKAKPVKASKP 173
Query: 493 KK-QPVKP 513
KK +PVKP
Sbjct: 174 KKAKPVKP 181
>X03473-1|CAA27190.1| 194|Homo sapiens protein ( Human gene for
histone H1(0). ).
Length = 194
Score = 30.3 bits (65), Expect = 8.1
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 KVPATKKKAEXXXXXXXXXEPPKQASKP-NQAVKKLNITPAKKQEXXXXXXXXXXVTSKP 492
K AT KKA K + P +A KKL TP KK + SKP
Sbjct: 115 KKVATPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATP-KKAKKPKTVKAKPVKASKP 173
Query: 493 KK-QPVKP 513
KK +PVKP
Sbjct: 174 KKAKPVKP 181
>CR542220-1|CAG47016.1| 194|Homo sapiens H1F0 protein.
Length = 194
Score = 30.3 bits (65), Expect = 8.1
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 KVPATKKKAEXXXXXXXXXEPPKQASKP-NQAVKKLNITPAKKQEXXXXXXXXXXVTSKP 492
K AT KKA K + P +A KKL TP KK + SKP
Sbjct: 115 KKVATPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATP-KKAKKPKTVKAKPVKASKP 173
Query: 493 KK-QPVKP 513
KK +PVKP
Sbjct: 174 KKAKPVKP 181
>CR456502-1|CAG30388.1| 194|Homo sapiens H1F0 protein.
Length = 194
Score = 30.3 bits (65), Expect = 8.1
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 KVPATKKKAEXXXXXXXXXEPPKQASKP-NQAVKKLNITPAKKQEXXXXXXXXXXVTSKP 492
K AT KKA K + P +A KKL TP KK + SKP
Sbjct: 115 KKVATPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATP-KKAKKPKTVKAKPVKASKP 173
Query: 493 KK-QPVKP 513
KK +PVKP
Sbjct: 174 KKAKPVKP 181
>BC029046-1|AAH29046.1| 194|Homo sapiens H1 histone family, member
0 protein.
Length = 194
Score = 30.3 bits (65), Expect = 8.1
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 KVPATKKKAEXXXXXXXXXEPPKQASKP-NQAVKKLNITPAKKQEXXXXXXXXXXVTSKP 492
K AT KKA K + P +A KKL TP KK + SKP
Sbjct: 115 KKVATPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATP-KKAKKPKTVKAKPVKASKP 173
Query: 493 KK-QPVKP 513
KK +PVKP
Sbjct: 174 KKAKPVKP 181
>BC000145-1|AAH00145.1| 194|Homo sapiens H1 histone family, member
0 protein.
Length = 194
Score = 30.3 bits (65), Expect = 8.1
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 KVPATKKKAEXXXXXXXXXEPPKQASKP-NQAVKKLNITPAKKQEXXXXXXXXXXVTSKP 492
K AT KKA K + P +A KKL TP KK + SKP
Sbjct: 115 KKVATPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATP-KKAKKPKTVKAKPVKASKP 173
Query: 493 KK-QPVKP 513
KK +PVKP
Sbjct: 174 KKAKPVKP 181
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.309 0.125 0.345
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,603,280
Number of Sequences: 237096
Number of extensions: 1413622
Number of successful extensions: 2381
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2368
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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