Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18o12f
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021180-2|CAA15981.2| 188|Caenorhabditis elegans Hypothetical ... 41 9e-04
Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical pr... 37 0.014
U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 29 3.7
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 29 3.7
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 28 4.9
U41533-1|AAA83162.2| 357|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z82085-4|CAB04986.1| 249|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 28 6.5
U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog (hedg... 28 6.5
U28731-2|AAA68297.1| 658|Caenorhabditis elegans Hypothetical pr... 28 6.5
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 28 6.5
AF016451-8|AAB66004.2| 354|Caenorhabditis elegans Serpentine re... 28 6.5
U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in bl... 27 8.6
U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical pr... 27 8.6
>AL021180-2|CAA15981.2| 188|Caenorhabditis elegans Hypothetical
protein F43C1.3 protein.
Length = 188
Score = 40.7 bits (91), Expect = 9e-04
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 185 THSEMNCGTCRSDPK--YKCPTCMVPYCSVACYKLHKQNPC 301
T S + CG C + + YKCP C + YC++ CY+ K + C
Sbjct: 3 TSSFLACGICGVEKREPYKCPRCDLLYCTIKCYRNPKHSEC 43
>Z70783-9|CAA94857.2| 455|Caenorhabditis elegans Hypothetical
protein ZK856.9 protein.
Length = 455
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 203 CGTC-RSDPKYKCPTCMVPYCSVACYKLHK-QNPC 301
C C +++ KYKCP C + CS+ C K HK N C
Sbjct: 84 CKVCLKNEHKYKCPRCEMRTCSLDCSKKHKADNNC 118
>U70853-1|AAB09143.2| 439|Caenorhabditis elegans Hypothetical
protein M01H9.2 protein.
Length = 439
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 209 TCRSDPKYKCPTCMVPYCSVACYKLHKQNPCIKPPSPPKQTIGVKQAVENLYPTEDTVPL 388
TC ++ K C + YC C K + + +KP S +TI V Q N T T
Sbjct: 60 TCSAERKKDCDDMLSDYCPRLCGKCYAK---LKPDSKRTKTIPVTQFKRNPAATSTTTTT 116
Query: 389 HR 394
R
Sbjct: 117 TR 118
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 170 IKFQPTHSEMNCGTCRSDPKYKCPTC-MVPYCSVAC 274
+ QP ++ CG+C+S + CPTC C+ AC
Sbjct: 141 VVLQPQQNQ--CGSCQSSCQQTCPTCNCQSACAPAC 174
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
protein K04B12.1 protein.
Length = 1764
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 203 CGTCRSDPKYKCPTCM-VPYCSVACYKLHKQNPCIK-PPSPPKQTIGVKQAV 352
C +C S +Y C C + CS +C L K C+K P IG +Q +
Sbjct: 582 CSSCMSS-EYNCAWCSGLHKCSNSCGALEKSKACVKIQPMRLPIAIGSQQEI 632
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 203 CGTCRSDPKYKCPTCM-VPYCSVACYKLHKQNPCIK-PPSPPKQTIGVKQAV 352
C +C S +Y C C + CS +C L K C+K P IG +Q +
Sbjct: 584 CSSCMSS-EYNCAWCSGLHKCSNSCGALEKSKACVKIQPMRLPIAIGSQQEI 634
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical protein
M142.6 protein.
Length = 1014
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +2
Query: 224 PKYKCPTCMVPYCSVACYKLHKQNPCIKPPSPPK--QTIGVKQAVENLYPTEDTVPLHRL 397
P+ P VP V NP + PP PP Q + V A+ L P + H
Sbjct: 879 PQPVIPMVQVPV-QVPIVPAENFNPNVPPPPPPPQGQPMLVDSAIGLLTPIRPILVAHPQ 937
Query: 398 NLLENSTE 421
N++ NS +
Sbjct: 938 NVVSNSLD 945
>Z81540-2|CAB04403.1| 190|Caenorhabditis elegans Hypothetical
protein F46B3.2 protein.
Length = 190
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +2
Query: 152 KYTNCPIKFQPTHSEMNCGTCRSDPKYKCPTCMV-PYCSVACYKLHKQNPCIK 307
++ +C F + CG C+ DP TC V P C Q C K
Sbjct: 46 QFRSCDKSFLAKKKKYTCGLCKKDPNVCSDTCTVCPMDMSPCETDQYQKICPK 98
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical protein
M142.6 protein.
Length = 1014
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +2
Query: 224 PKYKCPTCMVPYCSVACYKLHKQNPCIKPPSPPK--QTIGVKQAVENLYPTEDTVPLHRL 397
P+ P VP V NP + PP PP Q + V A+ L P + H
Sbjct: 879 PQPVIPMVQVPV-QVPIVPAENFNPNVPPPPPPPQGQPMLVDSAIGLLTPIRPILVAHPQ 937
Query: 398 NLLENSTE 421
N++ NS +
Sbjct: 938 NVVSNSLD 945
>U41533-1|AAA83162.2| 357|Caenorhabditis elegans Hypothetical
protein R05F9.7 protein.
Length = 357
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 128 YSYFHNIFLAYFLSVTYLFRLFGIFYVPNSVLFFVIVL 15
++YF F L++ YLF LF Y+ S+ F ++L
Sbjct: 68 FNYFVKSFQIVHLNLQYLFLLFTTLYIFGSLARFYMIL 105
>Z82085-4|CAB04986.1| 249|Caenorhabditis elegans Hypothetical
protein ZK218.5 protein.
Length = 249
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 203 CGTCRSDPKYKCPTCMVPYCSVA 271
CG C P YKCP P + A
Sbjct: 108 CGYCCESPDYKCPNVQFPRLNCA 130
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 323 KQTIGVKQAVENLYPTEDTVPLHRLNLLENST---EVKKCLENPHVREILELLDSSANPD 493
K GV++ +EN ++T P+ N++E+S E+ L++P +I E+ SAN
Sbjct: 50 KMEEGVEETMENASVVKETTPVKDENIVEDSNSSEELFPYLDSPPEDKIQEI---SANDT 106
Query: 494 ELVQ 505
E+ Q
Sbjct: 107 EIDQ 110
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +2
Query: 161 NCPI---KFQPTHSEMNCGTCRSDPKYKCPTCMVPYCSVAC 274
NCP K H E NCG C P + C P + +C
Sbjct: 569 NCPRHDRKICAEHGECNCGKCICAPGWTGRACECPISTDSC 609
>U97012-3|AAK39144.2| 588|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 9 protein.
Length = 588
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 275 YKLHKQNPCIKPPSPPK-QTIGVKQAVENLYPTEDTVPLHR 394
Y Q P PP PPK Q +Q EN Y T + V +R
Sbjct: 218 YNQAPQRPLYIPPPPPKLQVYPPQQLAENPYQTRNGVNNYR 258
>U28731-2|AAA68297.1| 658|Caenorhabditis elegans Hypothetical
protein F12A10.4 protein.
Length = 658
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 401 LLENSTEVKKCLENPHVREILELLDSSANPDE 496
+L+ + K+C++ + E+LEL+DSS NP E
Sbjct: 89 MLDLPCQTKECVK--YSAELLELMDSSVNPCE 118
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Frame = +2
Query: 161 NCPI---KFQPTHSEMNCGTCRSDPKYKCPTCMVPYCSVAC 274
NCP K H E NCG C P + C P + +C
Sbjct: 569 NCPRHDRKICAEHGECNCGKCICAPGWTGRACECPISTDSC 609
>AF016451-8|AAB66004.2| 354|Caenorhabditis elegans Serpentine
receptor, class t protein65 protein.
Length = 354
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -2
Query: 164 NLCTYCHLIKRVYSYFHNIFLAY-FL--SVTYLFRLFG 60
NL YC + + V +F +FL + F+ ++ Y+ R+FG
Sbjct: 99 NLLNYCDVSQAVCHFFTGLFLIFPFITENIQYIVRIFG 136
>U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 10 protein.
Length = 375
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +2
Query: 167 PIKFQPTHSEMNCGTCRSDPKYKCPTCMVPYCSVACYKLHKQNPCIKPPSPP 322
P++ P + TC P + P C + C + +QNPC + P
Sbjct: 234 PVQQNPCCQQQAQSTCDCAPVQQNPCCQQAQPACDCAPVVQQNPCACQQAQP 285
>U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical
protein F47E1.3 protein.
Length = 594
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -1
Query: 435 RHFLTSVEFSNKLSLC---NGTVSSVGYKFSTACFTPIVCFGGDG 310
+H L S+ ++ C +G + + ++ T CFT +VCF DG
Sbjct: 345 QHSLLSLPHPQQILACAHDHGVLLNT-FQLPTGCFTTLVCFKPDG 388
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,346,978
Number of Sequences: 27780
Number of extensions: 314110
Number of successful extensions: 1185
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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