Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18n20r
(824 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 372 e-105
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 363 e-102
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 233 2e-63
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 155 4e-40
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 25 0.85
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.5
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.5
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.5
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.4
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 4.5
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 7.9
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 7.9
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 7.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 372 bits (915), Expect = e-105
Identities = 175/194 (90%), Positives = 182/194 (93%)
Frame = -1
Query: 824 LQDVYKIGGIGTVPVGRVENWCVKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 645
LQDVYKIGGIGTVPVGRVE +KPG +V FAPA +TTEVKSVEMHHEALQEAVPGDNVG
Sbjct: 250 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVG 309
Query: 644 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 465
FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
Query: 464 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 285
CKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDM
Sbjct: 370 CKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDM 429
Query: 284 RQTVAVGVIKAVNF 243
RQTVAVGVIKAV F
Sbjct: 430 RQTVAVGVIKAVTF 443
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 363 bits (893), Expect = e-102
Identities = 170/194 (87%), Positives = 181/194 (93%)
Frame = -1
Query: 824 LQDVYKIGGIGTVPVGRVENWCVKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 645
LQDVYKIGGIGTVPVGRVE +KPG +V FAPA +TTEVKSVEMHHEAL EA+PGDNVG
Sbjct: 250 LQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALTTEVKSVEMHHEALTEALPGDNVG 309
Query: 644 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 465
FNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
Query: 464 CKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDM 285
CKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDM
Sbjct: 370 CKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDM 429
Query: 284 RQTVAVGVIKAVNF 243
RQTVAVGVIK+V F
Sbjct: 430 RQTVAVGVIKSVTF 443
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 233 bits (569), Expect = 2e-63
Identities = 108/119 (90%), Positives = 113/119 (94%)
Frame = -1
Query: 704 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 525
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 524 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 348
PGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 61 PGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 155 bits (377), Expect = 4e-40
Identities = 73/82 (89%), Positives = 76/82 (92%)
Frame = -1
Query: 824 LQDVYKIGGIGTVPVGRVENWCVKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVG 645
LQDVYKIGGIGTVPVGRVE +KPG +V FAPA +TTEVKSVEMHHEALQEAVPGDNVG
Sbjct: 193 LQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLTTEVKSVEMHHEALQEAVPGDNVG 252
Query: 644 FNVKNVSVKELRRGYVAGDSKN 579
FNVKNVSVKELRRGYVAGDSKN
Sbjct: 253 FNVKNVSVKELRRGYVAGDSKN 274
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 25.0 bits (52), Expect = 0.85
Identities = 13/55 (23%), Positives = 25/55 (45%)
Frame = +3
Query: 648 YIVSRYSFLESFVVHLHRLDFSSDVGGGKDNNGTWFHTPVFNSADGHGTNTTDFV 812
Y+ SR + +S ++ DF + + + + V ++ G G +TDFV
Sbjct: 338 YMYSREQYSQSHLISNENRDFQTTPTVSVEQPHLFLYPEVSSTYTGFGIQSTDFV 392
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 136 KYRSCMKNCAVNSSSYFLPLVAFS 207
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 136 KYRSCMKNCAVNSSSYFLPLVAFS 207
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 136 KYRSCMKNCAVNSSSYFLPLVAFS 207
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 97 CSPFFLRNTFR*MKYRSCMKN 159
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 3.4
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 626 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 519
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.6 bits (46), Expect = 4.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +1
Query: 748 PGFTHQFSTLPTGTVPIPPILYTSC 822
PG H T P PI+Y SC
Sbjct: 117 PGMGHMGHTPTPNGHPSTPIVYASC 141
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 507 RLHTSLGLPHCPHC 466
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 7.9
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +3
Query: 423 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 602
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 603 TTT 611
T T
Sbjct: 137 TVT 139
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 7.9
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = +3
Query: 423 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 602
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 603 TTT 611
T T
Sbjct: 137 TVT 139
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,491
Number of Sequences: 438
Number of extensions: 4860
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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