Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18n19f
         (772 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    24   1.4  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    23   2.4  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   2.4  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   4.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   4.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   7.3  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              21   9.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.6  

>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +1

Query: 574 WISPATVTWIIKEFLTSDDPDVRFLAETFIWHIVPVTNPDGYTYTFSEDRM--WR 732
           W+ P  + ++   F+  + PD+   A T++  I    NP  Y +  ++ R+  WR
Sbjct: 319 WL-PFFILYLATPFVPVEPPDILMPALTWLGWINSAINPFIYAFYSADFRLAFWR 372


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +1

Query: 448 TMVIGTSFEGRELKGIVIDFKKGERGNNPLIGMIEGGIHSR 570
           ++VI  + EG+    + ID+K+     N + G   GG++ R
Sbjct: 41  SIVIQGTKEGKSRPSLDIDYKQRVYDKNGMTGDAYGGLNIR 81


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 577 SIHGSEYLPQSSQSEDCC 524
           SIH   YL +SS+S D C
Sbjct: 65  SIHEESYLAESSRSIDPC 82


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = -3

Query: 707 VYVYPSGFVTGTMCQIKVSAKNLTSGSSLVKNSLMIQVTVAG 582
           V++Y  GF++GT      +A  + + S+++  S+  +V   G
Sbjct: 162 VWIYGGGFMSGTATLDVYNADIMAATSNVIIASMQYRVGAFG 203


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = -3

Query: 707 VYVYPSGFVTGTMCQIKVSAKNLTSGSSLVKNSLMIQVTVAG 582
           V++Y  GF++GT      +A  + + S+++  S+  +V   G
Sbjct: 162 VWIYGGGFMSGTATLDVYNADIMAATSNVIIASMQYRVGAFG 203


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 610 EFLTSDDPDVRFLAETFIW-HIVPV 681
           +FLT D+    F+   FIW +++P+
Sbjct: 209 DFLTDDEDTKVFVTCIFIWAYVIPL 233


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = +1

Query: 610 EFLTSDDPDVRFLAETFIW-HIVPV 681
           +FLT D+    F+   FIW +++P+
Sbjct: 209 DFLTDDEDTKVFVTCIFIWAYVIPL 233


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 221 TITLAFPPIVRISVQKSYPAF 159
           +  + FPP+V    ++S+PA+
Sbjct: 193 SFVICFPPLVGWKDKRSHPAY 213


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 692 MDTRTHSRRIVCGERTGI 745
           + TR H+ + VC   TGI
Sbjct: 22  LKTRLHTEQSVCKTETGI 39


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +1

Query: 106 YNVVPTSEIHIQTLG 150
           Y V+P+ E+HI+ +G
Sbjct: 157 YLVLPSGELHIRDVG 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,453
Number of Sequences: 438
Number of extensions: 4789
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)