Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18n12f
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66495-9|CAH19100.1|  670|Caenorhabditis elegans Hypothetical pr...    46   2e-05
Z66495-8|CAA91274.1|  680|Caenorhabditis elegans Hypothetical pr...    46   2e-05
U40938-6|AAA81698.1|  655|Caenorhabditis elegans Hypothetical pr...    46   3e-05
U40938-7|AAK68282.1|   94|Caenorhabditis elegans Hypothetical pr...    36   0.043
Z68315-12|CAA92673.1|  345|Caenorhabditis elegans Hypothetical p...    29   3.7  
Z47357-5|CAA87424.1|  446|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AF101318-3|AAK68598.1|  336|Caenorhabditis elegans Seven tm rece...    29   4.9  
AF077542-4|AAU20829.1|  315|Caenorhabditis elegans Serpentine re...    28   6.5  

>Z66495-9|CAH19100.1|  670|Caenorhabditis elegans Hypothetical
           protein C36A4.9b protein.
          Length = 670

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
 Frame = +3

Query: 603 NVKR-HPNKACFLYE-NE-----SWSFKQVEEFSLRVTAVLKNHGVKRGDVVGVMMNNCP 761
           N+KR + NK  +++E NE     +W++ ++    ++ +AVL++HGVKRGDVV + +   P
Sbjct: 93  NIKRGYGNKIAYIFEGNEPTDTSTWTYNELHAQVVQFSAVLRSHGVKRGDVVALYLPMIP 152

Query: 762 EIA 770
           E+A
Sbjct: 153 ELA 155


>Z66495-8|CAA91274.1|  680|Caenorhabditis elegans Hypothetical
           protein C36A4.9a protein.
          Length = 680

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
 Frame = +3

Query: 603 NVKR-HPNKACFLYE-NE-----SWSFKQVEEFSLRVTAVLKNHGVKRGDVVGVMMNNCP 761
           N+KR + NK  +++E NE     +W++ ++    ++ +AVL++HGVKRGDVV + +   P
Sbjct: 103 NIKRGYGNKIAYIFEGNEPTDTSTWTYNELHAQVVQFSAVLRSHGVKRGDVVALYLPMIP 162

Query: 762 EIA 770
           E+A
Sbjct: 163 ELA 165


>U40938-6|AAA81698.1|  655|Caenorhabditis elegans Hypothetical
           protein D1009.1a protein.
          Length = 655

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
 Frame = +3

Query: 489 AARTAPRDFSALWCYVKILRLSGNFGKKNWSMPDIFHENVKRHPNKACF--LYENESWSF 662
           A  T PRDF+ L   + +        KK+  + +IF   VK+HPNK     +      ++
Sbjct: 51  ALATLPRDFAGLKLLISVKSTIRGLFKKDRPIHEIFLNQVKQHPNKVAIIEIESGRQLTY 110

Query: 663 KQVEEFSLRVTAVLKNHGVKRGDVVGVMMNN 755
           +++   + +   +  + G K GDVV + M N
Sbjct: 111 QELNALANQYANLYVSEGYKMGDVVALFMEN 141


>U40938-7|AAK68282.1|   94|Caenorhabditis elegans Hypothetical
           protein D1009.1b protein.
          Length = 94

 Score = 35.5 bits (78), Expect = 0.043
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 489 AARTAPRDFSALWCYVKILRLSGNFGKKNWSMPDIFHENVKRHPNKACFL 638
           A  T PRDF+ L   + +        KK+  + +IF   VK+HPNK   +
Sbjct: 17  ALATLPRDFAGLKLLISVKSTIRGLFKKDRPIHEIFLNQVKQHPNKVAII 66


>Z68315-12|CAA92673.1|  345|Caenorhabditis elegans Hypothetical
           protein F28C6.9 protein.
          Length = 345

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +3

Query: 573 NWSMPDIFHENVKRHP--NKACFLYENESWSFKQVEEFSLRVTAVLKNH 713
           N++ P   H N+KR P     C   E + W F +   FS +   + K H
Sbjct: 4   NYNFPVTVHSNIKRQPCSKLHCAFAEIQCWKFTKPGVFSSKHFKMYKMH 52


>Z47357-5|CAA87424.1|  446|Caenorhabditis elegans Hypothetical
           protein ZK1128.5 protein.
          Length = 446

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +3

Query: 474 KWLYIAARTAPRDFSALWCYVKILRL 551
           K L IAA T PR   ALW Y+K  +L
Sbjct: 233 KVLGIAAETRPRIIEALWQYIKTHKL 258


>AF101318-3|AAK68598.1|  336|Caenorhabditis elegans Seven tm
           receptor protein 69 protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -3

Query: 341 FSPRHSIRI-TVLFAFFDVNSTGFHLFMIIIC 249
           FS   S+R  TV++    ++S  FH F+II+C
Sbjct: 186 FSADGSLRWNTVIYLIIGISSISFHYFIIIVC 217


>AF077542-4|AAU20829.1|  315|Caenorhabditis elegans Serpentine
           receptor, class z protein63 protein.
          Length = 315

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = -3

Query: 344 YFSPRHSIRITVLFAFFDVNSTGFHLFMIIICVIHVAIYRRNNVHHCDLLLQ 189
           Y+   + I    LFAF  +N+T FH+ ++++ ++   +Y   +   C L +Q
Sbjct: 86  YWKLLNFISFCSLFAFH-INNTVFHVLIMMMTLVKFLVYFFPSTEKCSLSVQ 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,310,319
Number of Sequences: 27780
Number of extensions: 360421
Number of successful extensions: 1062
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)