Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18n04f
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical pr... 243 1e-64
U49829-3|AAA93384.1| 724|Caenorhabditis elegans Hypothetical pr... 188 3e-48
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 149 3e-36
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 149 3e-36
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 76 2e-14
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 76 2e-14
Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 3.3
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 29 4.4
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 29 4.4
AF098995-9|AAC67486.1| 295|Caenorhabditis elegans F-box b prote... 28 5.8
U58750-1|AAB00641.1| 307|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical
protein F32B6.2 protein.
Length = 671
Score = 243 bits (594), Expect = 1e-64
Identities = 112/189 (59%), Positives = 145/189 (76%)
Frame = +1
Query: 148 ISKVLIANRGEIACRVMRTAKKLGVRTVAVYSDADRHAMHVEMADEAYHIGPAPSTQSYL 327
I +VL+ANRGEIA RV TA+K+G+ TVAV+SDADR+++ V+ AD+AYHIGP + +SYL
Sbjct: 19 IQRVLVANRGEIAIRVQNTARKMGIETVAVFSDADRNSLFVKKADKAYHIGPPLAAESYL 78
Query: 328 NASKILEVAKKSNSQAIHPGYGFLSENVEFCEKCASEDIIFIGPPPSAIRDMGIKSTSKA 507
N KI+ A +S +QAIHPGYGFLSEN F EKCA ++FIGPP AIRDMG K+ SK
Sbjct: 79 NMDKIINSALRSGAQAIHPGYGFLSENAGFAEKCAQAGLVFIGPPAQAIRDMGAKNVSKQ 138
Query: 508 IMSAAGVPIVRGYHGEDQNIERLKAEAQRIGFPLMIKAVRGGGGKGMRIAMTESDFLPQL 687
IM A VP+V+G+HGEDQ+ LK ++ IG+P+M+KAV GGGGKGMRIA E++F +L
Sbjct: 139 IMEDAKVPVVKGFHGEDQSDANLKKKSAEIGYPVMLKAVYGGGGKGMRIAWNEAEFEEKL 198
Query: 688 ESAKRESLK 714
SA+ E+ K
Sbjct: 199 ASARNEAKK 207
>U49829-3|AAA93384.1| 724|Caenorhabditis elegans Hypothetical
protein F27D9.5 protein.
Length = 724
Score = 188 bits (458), Expect = 3e-48
Identities = 90/188 (47%), Positives = 128/188 (68%)
Frame = +1
Query: 145 QISKVLIANRGEIACRVMRTAKKLGVRTVAVYSDADRHAMHVEMADEAYHIGPAPSTQSY 324
+ K+LIANRGEIACRV++TA+ +G++TVAV+SD D +++HV+MADEA +G AP+ +SY
Sbjct: 48 KFDKILIANRGEIACRVIKTARAMGIKTVAVHSDVDSNSLHVKMADEAVCVGEAPTAKSY 107
Query: 325 LNASKILEVAKKSNSQAIHPGYGFLSENVEFCEKCASEDIIFIGPPPSAIRDMGIKSTSK 504
L A +IL+ + + +QA+HPGYGFLSEN +F + FIGP AI DMG K SK
Sbjct: 108 LRADRILQAVEDTGAQAVHPGYGFLSENTKFAAELEKAGAKFIGPNSKAILDMGDKIHSK 167
Query: 505 AIMSAAGVPIVRGYHGEDQNIERLKAEAQRIGFPLMIKAVRGGGGKGMRIAMTESDFLPQ 684
I +AA V ++ GY GE + + ++ IG+P+MIKA GGGGKGMR+A +
Sbjct: 168 KIATAARVSMIPGYDGEIADEDMCVKVSRDIGYPVMIKASAGGGGKGMRVAWNDKQAREG 227
Query: 685 LESAKRES 708
+K+E+
Sbjct: 228 YRLSKQEA 235
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical
protein D2023.2 protein.
Length = 1175
Score = 149 bits (360), Expect = 3e-36
Identities = 78/193 (40%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Frame = +1
Query: 133 VQRTQISKVLIANRGEIACRVMRTAKKLGVRTVAVYSDADRHAMHVEMADEAYHIGPA-P 309
++ + +KV++ANRGEIA RV R +L +VA+Y++ D+++MH ADEAY +G P
Sbjct: 27 IKPREFNKVMVANRGEIAIRVFRALTELNKTSVAIYAEQDKNSMHRLKADEAYLVGKGLP 86
Query: 310 STQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEKCASEDIIFIGPPPSAIRDMGI 489
+YL +I+E A K N AIHPGYGFLSE +F C + I+FIGP P + MG
Sbjct: 87 PVAAYLTIDQIIETALKHNIDAIHPGYGFLSERSDFAAACQNAGIVFIGPSPDVMARMGD 146
Query: 490 KSTSKAIMSAAGVPIVRGYHGEDQNIERLKAEAQRIGFPLMIKAVRGGGGKGMRIAMTES 669
K ++ AGV +V G G + A++ G P+++KA GGGG+G+R
Sbjct: 147 KVAARQAAIEAGVQVVPGTPGPITTADEAVEFAKQYGTPIILKAAYGGGGRGIR----RV 202
Query: 670 DFLPQLESAKRES 708
D L ++E A R S
Sbjct: 203 DKLEEVEEAFRRS 215
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 149 bits (360), Expect = 3e-36
Identities = 78/193 (40%), Positives = 113/193 (58%), Gaps = 1/193 (0%)
Frame = +1
Query: 133 VQRTQISKVLIANRGEIACRVMRTAKKLGVRTVAVYSDADRHAMHVEMADEAYHIGPA-P 309
++ + +KV++ANRGEIA RV R +L +VA+Y++ D+++MH ADEAY +G P
Sbjct: 27 IKPREFNKVMVANRGEIAIRVFRALTELNKTSVAIYAEQDKNSMHRLKADEAYLVGKGLP 86
Query: 310 STQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEKCASEDIIFIGPPPSAIRDMGI 489
+YL +I+E A K N AIHPGYGFLSE +F C + I+FIGP P + MG
Sbjct: 87 PVAAYLTIDQIIETALKHNIDAIHPGYGFLSERSDFAAACQNAGIVFIGPSPDVMARMGD 146
Query: 490 KSTSKAIMSAAGVPIVRGYHGEDQNIERLKAEAQRIGFPLMIKAVRGGGGKGMRIAMTES 669
K ++ AGV +V G G + A++ G P+++KA GGGG+G+R
Sbjct: 147 KVAARQAAIEAGVQVVPGTPGPITTADEAVEFAKQYGTPIILKAAYGGGGRGIR----RV 202
Query: 670 DFLPQLESAKRES 708
D L ++E A R S
Sbjct: 203 DKLEEVEEAFRRS 215
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 76.2 bits (179), Expect = 2e-14
Identities = 68/240 (28%), Positives = 103/240 (42%), Gaps = 39/240 (16%)
Frame = +1
Query: 103 RYNHAQIKEKVQRTQISKVLIANRGEIACRVMRTAKKLGVRT---------VAVYSDADR 255
++ H+ + + +R I ++L+A G A R + TAKK T V + ++ +
Sbjct: 33 QFIHSHVADIEKRRPIKRLLVATNGIAAMRCLMTAKKFLHHTFRNDNLIHFVCMTTEDEI 92
Query: 256 HAMHVEMADEAYHIGPAPS---TQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEK 426
+M + + +PS ++ N +IL+ A K A+ G+G SEN + +
Sbjct: 93 QSMSESLRMPNITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGWGHASENPDLPRR 152
Query: 427 CASEDIIFIGPPPSAIRDMGIKSTSKAIMSAAGVPIV--RGYHGEDQNIERLKAE----- 585
+I FIGPP SA+ +G K S I GVP V G ++IER + +
Sbjct: 153 LNDHNIAFIGPPASAMFSLGDKIASTIIAQTVGVPTVAWSGSGITMESIERSRGDFVVVP 212
Query: 586 --------------------AQRIGFPLMIKAVRGGGGKGMRIAMTESDFLPQLESAKRE 705
IGFPLMIKA GGGGKG+R DF E +E
Sbjct: 213 EDLLEQACVANYKEGLEALKTHNIGFPLMIKASEGGGGKGIRKCTKVEDFKSMFEEVAQE 272
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 76.2 bits (179), Expect = 2e-14
Identities = 68/240 (28%), Positives = 103/240 (42%), Gaps = 39/240 (16%)
Frame = +1
Query: 103 RYNHAQIKEKVQRTQISKVLIANRGEIACRVMRTAKKLGVRT---------VAVYSDADR 255
++ H+ + + +R I ++L+A G A R + TAKK T V + ++ +
Sbjct: 33 QFIHSHVADIEKRRPIKRLLVATNGIAAMRCLMTAKKFLHHTFRNDNLIHFVCMTTEDEI 92
Query: 256 HAMHVEMADEAYHIGPAPS---TQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEK 426
+M + + +PS ++ N +IL+ A K A+ G+G SEN + +
Sbjct: 93 QSMSESLRMPNITLAESPSGTNKNNFANVDEILKHAIKYEVDAVWAGWGHASENPDLPRR 152
Query: 427 CASEDIIFIGPPPSAIRDMGIKSTSKAIMSAAGVPIV--RGYHGEDQNIERLKAE----- 585
+I FIGPP SA+ +G K S I GVP V G ++IER + +
Sbjct: 153 LNDHNIAFIGPPASAMFSLGDKIASTIIAQTVGVPTVAWSGSGITMESIERSRGDFVVVP 212
Query: 586 --------------------AQRIGFPLMIKAVRGGGGKGMRIAMTESDFLPQLESAKRE 705
IGFPLMIKA GGGGKG+R DF E +E
Sbjct: 213 EDLLEQACVANYKEGLEALKTHNIGFPLMIKASEGGGGKGIRKCTKVEDFKSMFEEVAQE 272
>Z82285-5|CAB05298.2| 1679|Caenorhabditis elegans Hypothetical
protein T28F3.5 protein.
Length = 1679
Score = 73.3 bits (172), Expect = 2e-13
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 33/209 (15%)
Frame = +1
Query: 148 ISKVLIANRGEIACRVMRTAKK-----LGVRTVAVY-----SDADRHAMH-VEMADEAYH 294
I ++L+AN G A + + + ++ G V + D R A H +++ADE
Sbjct: 30 IKRILVANNGLAAMKCLISIRQWLQNQFGTSGVVSFVCIATEDEMRSASHYLKLADEIVM 89
Query: 295 IGPAPSTQSYLNASKILEVAKKSNSQAIHPGYGFLSENVEFCEKCASEDIIFIGPPPSAI 474
+++++ N I+ +A ++ A++ G+G SEN E C + +IIFIGP +I
Sbjct: 90 APAGSNSKNFANCDVIIRLAVEAQVDAVYVGWGHASENPELCRRLELNNIIFIGPSEKSI 149
Query: 475 RDMGIKSTSKAIMSAAGVPIV---------------RGYH-----GEDQNI-ERLKA-EA 588
G K S I + G+P V YH +N+ E L+A E
Sbjct: 150 IASGDKIVSTIIAQSIGMPTVTWTGSGVKVEECVDFEHYHELRSKATIRNVKEGLEAIEK 209
Query: 589 QRIGFPLMIKAVRGGGGKGMRIAMTESDF 675
IG P+MIKA GGGGKG+R DF
Sbjct: 210 YGIGVPMMIKASEGGGGKGIRKCENMDDF 238
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 406 NVEFCEKCASEDII-FIGPPPSAIRDMGIKSTSKAIMSAAGVPIVRG---YHGEDQNIER 573
NV + D++ F+G R + T++A +A + +R Y G+D+NI+
Sbjct: 1278 NVAITYENGKSDVLNFVGDFLDGYRHFVVVQTNQASATAVMIDSLRQDFEYRGKDKNIDL 1337
Query: 574 LKAEAQRIG 600
AE RIG
Sbjct: 1338 FNAERIRIG 1346
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 75 STDNTSEQYKVQPCTNQRESSKNTDQQSIDSKQRGDSMSGHENCKEIGSQD 227
S+++ E K + N ESSK ++++I + RGD + + + ++D
Sbjct: 728 SSESEPEPPKKKKKKNSEESSKKKEKENIGRRDRGDKRAERHRDQSVENKD 778
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/51 (25%), Positives = 27/51 (52%)
Frame = +3
Query: 75 STDNTSEQYKVQPCTNQRESSKNTDQQSIDSKQRGDSMSGHENCKEIGSQD 227
S+++ E K + N ESSK ++++I + RGD + + + ++D
Sbjct: 728 SSESEPEPPKKKKKKNSEESSKKKEKENIGRRDRGDKRAERHRDQSVENKD 778
>AF098995-9|AAC67486.1| 295|Caenorhabditis elegans F-box b protein
protein 19 protein.
Length = 295
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 302 LHLPHKAI*MHLKFLK*LKSLTVKLYIQATDFYLKMLNSVKNV 430
LHLPH A+ M LK + ++ L + T +KML ++
Sbjct: 9 LHLPHNALQMSLKQMSTVEHLALSFVSNKTRRLIKMLKEKNHI 51
>U58750-1|AAB00641.1| 307|Caenorhabditis elegans Hypothetical
protein F55G1.7 protein.
Length = 307
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Frame = +1
Query: 94 NNIRYNHAQIKEKVQRTQISKVLIANRGEIACR----VMRTAKKLGVRTV-AVYSDADRH 258
N++ NHAQ + ++ +S LI GE+ + T +KL +R V + D +
Sbjct: 192 NHLTINHAQFVKSLETVNMSTFLIRQEGELRAASFHIPLLTCQKLELRIVNPIEGDDESE 251
Query: 259 AMHV-EMADEAYHI 297
M + E E HI
Sbjct: 252 LMQIFEQIIENSHI 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,713,043
Number of Sequences: 27780
Number of extensions: 369011
Number of successful extensions: 1088
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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