Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18n03f
         (729 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    27   0.14 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   2.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   2.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.9  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   3.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   5.2  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 17/63 (26%), Positives = 31/63 (49%)
 Frame = -2

Query: 347 SSGSMLSKRICRGSPLMSTFEDLRNFAILSRLSNSPLLYETNKYCE*CNTPTQEMHDRLK 168
           SS S     +C  SP  S  +++ +  +L R+  +P LY+TN   +    P ++     +
Sbjct: 595 SSASSAPTSVC-SSP-RSEDKEVEDMPVLKRVLQAPPLYDTNSLMDEAYKPHKKFRALRQ 652

Query: 167 RDS 159
           +DS
Sbjct: 653 KDS 655



 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 366 AALRQSQHPRSQHPSGVHHLRESR 437
           AA++QS H RSQ  +    L + +
Sbjct: 153 AAMQQSSHSRSQEKAVAAELEDEQ 176


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 157 DDSYWNNIVIENIKRMTILYYRRSILEIMQVV 62
           D+S+WN++ +E        YY RSI +  ++V
Sbjct: 630 DESHWNDLAME-------FYYNRSIPDHKRIV 654


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 157 DDSYWNNIVIENIKRMTILYYRRSILEIMQVV 62
           D+S+WN++ +E        YY RSI +  ++V
Sbjct: 668 DESHWNDLAME-------FYYNRSIPDHKRIV 692


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = +3

Query: 360  QRAALRQSQHPRSQHPSGVHHLRESRAGAASHKRVEWM*IGGL------SYKSGGSRA 515
            Q+   +QSQ P+ Q P      ++ +      ++ E+  + GL       Y SG +R+
Sbjct: 1514 QQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGAVSGLVVQLQRGYNSGNNRS 1571


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 385 WLCRNAARCHTVRAVARCYRSG 320
           W+ R+  R   +  VARC ++G
Sbjct: 87  WITRSGTREQFIDMVARCNKAG 108


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +3

Query: 372 LRQSQHPRSQHPSGVHHLRES 434
           L  S HP   HPS  H  R S
Sbjct: 312 LPPSYHPHQHHPSQYHPHRGS 332


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,465
Number of Sequences: 438
Number of extensions: 4003
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)