Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18m23r
         (557 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   1.6  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   1.6  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   1.6  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.1  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.8  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   2.8  

>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/24 (29%), Positives = 17/24 (70%)
 Frame = +3

Query: 153 ISNNCSKYLNRKRGLFKNMIKYLI 224
           ++ +C K  +++R + K +IK+L+
Sbjct: 72  LATDCKKCTDKQREVIKKVIKFLV 95


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/24 (29%), Positives = 17/24 (70%)
 Frame = +3

Query: 153 ISNNCSKYLNRKRGLFKNMIKYLI 224
           ++ +C K  +++R + K +IK+L+
Sbjct: 72  LATDCKKCTDKQREVIKKVIKFLV 95


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 7/24 (29%), Positives = 17/24 (70%)
 Frame = +3

Query: 153 ISNNCSKYLNRKRGLFKNMIKYLI 224
           ++ +C K  +++R + K +IK+L+
Sbjct: 72  LATDCKKCTDKQREVIKKVIKFLV 95


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 123 LFYYLKRD*LISNNCSKYLNRKRGLFKNMIKY 218
           LFYY+ +  +   NC +  NR  G  K  I +
Sbjct: 233 LFYYMHQQIMARYNCERLCNR-LGRVKRFINW 263


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -2

Query: 517 KCMTFCAESVKAVLDLNNGLNLSTYCLR 434
           KC  FC   V+  +    G +   YC R
Sbjct: 68  KCEGFCNSQVQPSVASTTGFSKECYCCR 95


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -2

Query: 517 KCMTFCAESVKAVLDLNNGLNLSTYCLR 434
           KC  FC   V+  +    G +   YC R
Sbjct: 68  KCEGFCNSQVQPSVASTTGFSKECYCCR 95


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 439 LRIKDNFSKQISIIFLWNFYLFNFISQKLYRILNKGIYK 323
           L+  D     +S +FLW  Y  + ++  +Y  LN+   K
Sbjct: 398 LKNPDAIPAFLSSLFLWLGYCNSLLNPIIYATLNRDFRK 436


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,793
Number of Sequences: 438
Number of extensions: 2810
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)