Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18m23f
         (754 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr...    31   3.4  
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr...    31   3.4  
BC107742-1|AAI07743.1|  372|Homo sapiens IFT74 protein protein.        31   5.9  
AY040325-1|AAK77221.1|  600|Homo sapiens capillary morphogenesis...    31   5.9  
AL356133-4|CAH72643.1|  600|Homo sapiens intraflagellar transpor...    31   5.9  
AF163762-1|AAG35563.1| 1077|Homo sapiens zinc metalloendopeptida...    30   7.8  
AB209515-1|BAD92752.1|  847|Homo sapiens a disintegrin-like and ...    30   7.8  

>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
            protein.
          Length = 4262

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 5/130 (3%)
 Frame = -1

Query: 691  GCTLPGVTDS-WYLALPTYKVSPDAVLPPSTAPGGTLPLDADTHRRSSGLAHRTSIF*TG 515
            G ++P  T S     L +  VS   +     +   T PLD  TH  +S  A  +     G
Sbjct: 734  GASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTEG 793

Query: 514  ISLPLYIIEAALCLTDSFPGIMSPMCQ-ALMTHKGLPSQPSCPPTTARPVSEDAVVA--- 347
             S+P+        L  S P  ++P+      T    P   + P TT+  VS     A   
Sbjct: 794  TSMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGT 853

Query: 346  VVATQSYSPG 317
             + T +YS G
Sbjct: 854  SMPTSTYSEG 863


>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
            protein.
          Length = 4493

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 34/130 (26%), Positives = 50/130 (38%), Gaps = 5/130 (3%)
 Frame = -1

Query: 691  GCTLPGVTDS-WYLALPTYKVSPDAVLPPSTAPGGTLPLDADTHRRSSGLAHRTSIF*TG 515
            G ++P  T S     L +  VS   +     +   T PLD  TH  +S  A  +     G
Sbjct: 734  GASMPTSTPSEGSTPLTSMPVSKTLLTSSEASTLSTTPLDTSTHITTSTEASCSPTTTEG 793

Query: 514  ISLPLYIIEAALCLTDSFPGIMSPMCQ-ALMTHKGLPSQPSCPPTTARPVSEDAVVA--- 347
             S+P+        L  S P  ++P+      T    P   + P TT+  VS     A   
Sbjct: 794  TSMPISTPSEGSPLLTSIPVSITPVTSPEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGT 853

Query: 346  VVATQSYSPG 317
             + T +YS G
Sbjct: 854  SMPTSTYSEG 863


>BC107742-1|AAI07743.1|  372|Homo sapiens IFT74 protein protein.
          Length = 372

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +3

Query: 597 GAVLGGRTASGETLYVGRARYQLSVTPGKVHPSHKTCYIGFGG 725
           G  L GR  SG     G  R   ++ PG   P  + C IG GG
Sbjct: 17  GVGLTGRPPSGIRPLSGNIRVATAMPPGTARPGSRGCPIGTGG 59


>AY040325-1|AAK77221.1|  600|Homo sapiens capillary morphogenesis
           protein-1 protein.
          Length = 600

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +3

Query: 597 GAVLGGRTASGETLYVGRARYQLSVTPGKVHPSHKTCYIGFGG 725
           G  L GR  SG     G  R   ++ PG   P  + C IG GG
Sbjct: 17  GVGLTGRPPSGIRPLSGNIRVATAMPPGTARPGSRGCPIGTGG 59


>AL356133-4|CAH72643.1|  600|Homo sapiens intraflagellar transport
           74 homolog (Chlamydomonas) protein.
          Length = 600

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +3

Query: 597 GAVLGGRTASGETLYVGRARYQLSVTPGKVHPSHKTCYIGFGG 725
           G  L GR  SG     G  R   ++ PG   P  + C IG GG
Sbjct: 17  GVGLTGRPPSGIRPLSGNIRVATAMPPGTARPGSRGCPIGTGG 59


>AF163762-1|AAG35563.1| 1077|Homo sapiens zinc metalloendopeptidase
           protein.
          Length = 1077

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 22/84 (26%), Positives = 33/84 (39%)
 Frame = -1

Query: 610 PSTAPGGTLPLDADTHRRSSGLAHRTSIF*TGISLPLYIIEAALCLTDSFPGIMSPMCQA 431
           P+ APG     D    R   G+  R   +    S    + ++  C+T+S P     +CQ 
Sbjct: 439 PTVAPGQAYDADEQC-RFQHGVKSRQCKYGEVCSELWCLSKSNRCITNSIPAAEGTLCQT 497

Query: 430 LMTHKGLPSQPSCPPTTARPVSED 359
               KG   +  C P  +RP   D
Sbjct: 498 HTIDKGWCYKRVCVPFGSRPEGVD 521


>AB209515-1|BAD92752.1|  847|Homo sapiens a disintegrin-like and
           metalloprotease (reprolysin type) with thrombospondin ty
           protein.
          Length = 847

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 22/84 (26%), Positives = 33/84 (39%)
 Frame = -1

Query: 610 PSTAPGGTLPLDADTHRRSSGLAHRTSIF*TGISLPLYIIEAALCLTDSFPGIMSPMCQA 431
           P+ APG     D    R   G+  R   +    S    + ++  C+T+S P     +CQ 
Sbjct: 219 PTVAPGQAYDADEQC-RFQHGVKSRQCKYGEVCSELWCLSKSNRCITNSIPAAEGTLCQT 277

Query: 430 LMTHKGLPSQPSCPPTTARPVSED 359
               KG   +  C P  +RP   D
Sbjct: 278 HTIDKGWCYKRVCVPFGSRPEGVD 301


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,687,482
Number of Sequences: 237096
Number of extensions: 2507054
Number of successful extensions: 7233
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7225
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)