BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18m22r
(834 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 170 2e-44
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 157 2e-40
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 157 2e-40
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 109 2e-26
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 2.0
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 23 2.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 8.0
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 22 8.0
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 170 bits (413), Expect = 2e-44
Identities = 84/218 (38%), Positives = 134/218 (61%), Gaps = 1/218 (0%)
Frame = -3
Query: 784 VFGNHDNNRMPTRFRHDMVDGLNIINMLLPGVAVTYQGEEIGMRDGYVSWEDTVDIEACN 605
V GNHDN+R+ +RF D + ++ + LPG+ V Y G+EIGM D + ++++TVD CN
Sbjct: 349 VSGNHDNHRVASRFGRQRGDEIVMLTLTLPGIGVVYNGDEIGMEDRWFTYQETVDPAGCN 408
Query: 604 RGDPDTYHLYSRDPARTPYHWDNSTSAGFSTSTNTWLPVAEDYQEINLAKQKETARSHFK 425
G P Y+L SRDP RTPY WDNSTSAGFS + TWLPV E+Y+ +NLA QK SH+
Sbjct: 409 AG-PAKYYLKSRDPERTPYQWDNSTSAGFSQTNKTWLPVNENYKSLNLAAQKREYYSHYV 467
Query: 424 NYQALTKLRKQATLSHGEYDIRALSDRTFYLVRSLPTHDTYVLLFNVSERRDTVDLGRVP 245
+++L+ L+KQ +++G ++ + R + R L +DT +++ N S+ TV+L ++
Sbjct: 468 AFKSLSYLKKQPVIANGSLEVDVIDGRVLSVKREL-GNDTVIVMMNFSKNPVTVNLTKL- 525
Query: 244 HLTLPATVYVSSIHSARLA-GHEITSSQLSLEAGEALV 134
H VY ++ + L+ G+ I + +++ + V
Sbjct: 526 HPPADLVVYACNVVGSGLSHGNWIYPASMTIPGSNSAV 563
Score = 22.6 bits (46), Expect = 4.6
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -2
Query: 827 RWLTYMPYGGIPNW 786
RW+ +P G + NW
Sbjct: 335 RWVANVPNGSVTNW 348
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 157 bits (380), Expect = 2e-40
Identities = 74/193 (38%), Positives = 109/193 (56%)
Frame = -3
Query: 778 GNHDNNRMPTRFRHDMVDGLNIINMLLPGVAVTYQGEEIGMRDGYVSWEDTVDIEACNRG 599
GNHD R+ +RF + + +++LLPGVAV Y G+EIGM D Y+SWEDT D + C G
Sbjct: 345 GNHDQLRLVSRFGEEKARMITTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAG 404
Query: 598 DPDTYHLYSRDPARTPYHWDNSTSAGFSTSTNTWLPVAEDYQEINLAKQKETARSHFKNY 419
+ Y SRDPARTP+ WD+S SAGFS+S+NTWL V E+Y+ +NLA +K+ S F +
Sbjct: 405 K-ENYQTMSRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMF 463
Query: 418 QALTKLRKQATLSHGEYDIRALSDRTFYLVRSLPTHDTYVLLFNVSERRDTVDLGRVPHL 239
+ L+K + R L+D F R + + + N S VDL ++
Sbjct: 464 KKFASLKKSPYFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNV 523
Query: 238 TLPATVYVSSIHS 200
++ ++ +S
Sbjct: 524 PKKLNMFYNNFNS 536
Score = 31.5 bits (68), Expect = 0.010
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 824 WLTYMPYGGIPNW 786
W+TYMP GIPNW
Sbjct: 330 WMTYMPPSGIPNW 342
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 157 bits (380), Expect = 2e-40
Identities = 74/193 (38%), Positives = 109/193 (56%)
Frame = -3
Query: 778 GNHDNNRMPTRFRHDMVDGLNIINMLLPGVAVTYQGEEIGMRDGYVSWEDTVDIEACNRG 599
GNHD R+ +RF + + +++LLPGVAV Y G+EIGM D Y+SWEDT D + C G
Sbjct: 345 GNHDQLRLVSRFGEEKARMITTMSLLLPGVAVNYYGDEIGMSDTYISWEDTQDPQGCGAG 404
Query: 598 DPDTYHLYSRDPARTPYHWDNSTSAGFSTSTNTWLPVAEDYQEINLAKQKETARSHFKNY 419
+ Y SRDPARTP+ WD+S SAGFS+S+NTWL V E+Y+ +NLA +K+ S F +
Sbjct: 405 K-ENYQTMSRDPARTPFQWDDSVSAGFSSSSNTWLRVNENYKTVNLAAEKKDKNSFFNMF 463
Query: 418 QALTKLRKQATLSHGEYDIRALSDRTFYLVRSLPTHDTYVLLFNVSERRDTVDLGRVPHL 239
+ L+K + R L+D F R + + + N S VDL ++
Sbjct: 464 KKFASLKKSPYFKEANLNTRMLNDNVFAFSRETEDNGSLYAILNFSNEEQIVDLKAFNNV 523
Query: 238 TLPATVYVSSIHS 200
++ ++ +S
Sbjct: 524 PKKLNMFYNNFNS 536
Score = 31.5 bits (68), Expect = 0.010
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 824 WLTYMPYGGIPNW 786
W+TYMP GIPNW
Sbjct: 330 WMTYMPPSGIPNW 342
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 109 bits (263), Expect = 2e-26
Identities = 72/224 (32%), Positives = 110/224 (49%), Gaps = 6/224 (2%)
Frame = -3
Query: 784 VFGNHDNNRMPTRFRHDMVDGLNIINMLLPGVAVTYQGEEIGMRDGYVSWEDTVDIEACN 605
V GNHD R+ TR+ D + ++ M+LPGVAVTY GEEIGM D ++ V
Sbjct: 356 VMGNHDRVRVGTRYP-GRADHMIMLEMILPGVAVTYYGEEIGMVDNTTIYKYDV------ 408
Query: 604 RGDPDTYHLYSRDPARTPYHWDNSTSAGFSTSTNT-----WLPVAEDYQE-INLAKQKET 443
RD RTP+ WDNS +AGFS WLPV Y+ +NL ++K+
Sbjct: 409 -----------RDGCRTPFQWDNSINAGFSKIAENLLEKNWLPVHTSYKSGLNLEQEKKD 457
Query: 442 ARSHFKNYQALTKLRKQATLSHGEYDIRALSDRTFYLVRSLPTHDTYVLLFNVSERRDTV 263
+ SH+ Y LT LRK+ L G + I L+ +VR + LL N S+ V
Sbjct: 458 SISHYHLYTNLTALRKRDVLKKGNFTIEILNKTVLAVVRQ-SEEEAVSLLINFSKNNTIV 516
Query: 262 DLGRVPHLTLPATVYVSSIHSARLAGHEITSSQLSLEAGEALVL 131
D+ ++ + A +Y SS++S + +++ ++++
Sbjct: 517 DISKLVNKRNNAKIYTSSVNSNLTVNQTVNPVAINIPGDTSIIV 560
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.8 bits (49), Expect = 2.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -2
Query: 725 WPEHHQHAASWGS 687
WP + AASWGS
Sbjct: 464 WPMEEEPAASWGS 476
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.4 bits (48), Expect = 2.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 476 VIFSHWQPCICTS*KPS 526
V+F +W PCI +PS
Sbjct: 334 VVFLYWLPCILRMSRPS 350
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 8.0
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -3
Query: 451 KETARSHFKNYQALTKLRKQATLSHGEYDIRALSDRTFYLVRSLPTHDTYVLLFNV 284
K ++ K ++ TK K + G + + L T YLVR+ + + +F+V
Sbjct: 439 KRNIKAQVKRFRMETKAAKTLGIIVGGFILCWLPFFTMYLVRAFCRNCIHPTVFSV 494
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 671 RGDRHERRLCQLGRHCGHRS 612
RGD R+ +LGR G +S
Sbjct: 20 RGDNDRSRIARLGRDDGGKS 39
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,559
Number of Sequences: 438
Number of extensions: 4853
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -