Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18m21f
(741 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 44 9e-05
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 40 0.002
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 40 0.002
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 33 0.21
Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical pr... 32 0.49
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein. 29 4.6
AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein. 29 4.6
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 28 6.0
U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 44.4 bits (100), Expect = 9e-05
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 5/204 (2%)
Frame = +3
Query: 144 ELKSAEEGADFDGA--RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTA 317
+ +SA+E AD+ R++GGS + + P ++ L R CG SL+ +TA
Sbjct: 41 QTRSAQEPADYVTLDHRLIGGSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTA 97
Query: 318 AHCWRTRSAQGRXXXXXXXXXXXXXXXXRINTNNVQMHGSYNM--DNLHNDVAMIIHGRV 491
AHC+ R+ V +H YN+ + ++ M IH V
Sbjct: 98 AHCFAKDRRPTSYSVRVGGHRSGSGSPHRVTA--VSIHPWYNIGFPSSYDFAIMRIHPPV 155
Query: 492 GYTNVIQPIFLPPSHLLNNQFVGTWAWAAGYGRTSDASGSNTRKHQVALQVITNADCART 671
+ +PI LP + N+ W + +S ++ + H L + +
Sbjct: 156 NTSTTARPICLPSLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNY 215
Query: 672 FGNGVIASTLCVNTXGGR-STCRG 740
G + S LC G+ +C+G
Sbjct: 216 IGRIHLPSMLCAGYSYGKIDSCQG 239
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 39.5 bits (88), Expect = 0.002
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Frame = +3
Query: 186 RIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWRTRSAQGRXXXX 365
RI+GG+ G + +A +V +G+ +CGA+++ VTAAHC + Q +
Sbjct: 37 RIIGGNSIDDGAN-WMAKLVSYGDNGQGILCGATVIDDFWLVTAAHC----ALQLQTRSF 91
Query: 366 XXXXXXXXXXXXRINTNNVQMHGSYNMDNLHNDVAMIIHGRVGYTNVIQPIFL--PPSHL 539
+ +H YN ND+A++ I+P+ L S L
Sbjct: 92 VYVREPKNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLSKLGIKPVCLVHDDSKL 151
Query: 540 LNNQFVGTWAWAAGYGRT--SDASGS----NTRKHQ-VALQVITNADCARTF 674
L G GYG T D+SG N++ Q ++ +I++ DC +T+
Sbjct: 152 LKQYKNGV---VIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTW 200
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 39.5 bits (88), Expect = 0.002
Identities = 48/203 (23%), Positives = 75/203 (36%), Gaps = 7/203 (3%)
Frame = +3
Query: 153 SAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHCWR 332
+A + A AR+VGG G P AA+ T + CGAS+L T +TAAHC+
Sbjct: 15 NARDAAKSRIARVVGGFETVPGAFPWTAALRNKAT--KAHHCGASILDKTHLITAAHCFE 72
Query: 333 --TRSAQGRXXXXXXXXXXXXXXXXRINTNNVQMHGSYNMDNLHNDVAM--IIHGRVGYT 500
R + + + Y D +D+A+ I + + +
Sbjct: 73 EDERVSSYEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFN 131
Query: 501 NVIQPIFLPPSHLLNNQFVGTWAWAAGYGRTSDASGSNTRKHQVALQVITNADCART--F 674
QPI LP + G +G+G S R + +I DC +
Sbjct: 132 EYAQPICLPSKDFVYTP--GRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQI 187
Query: 675 GNGVIASTLCVN-TXGGRSTCRG 740
+ + S C GG +C+G
Sbjct: 188 YSSMSRSAFCAGYLEGGIDSCQG 210
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +3
Query: 189 IVGGSVAGLGTHPHLAAMVITLTDGRTSMCGASLLSHTRSVTAAHC 326
I+ G A LA+++ DG T++CG L++ + +T+AHC
Sbjct: 17 IINGFSANSFDTLSLASVITRFPDGTTNVCGGVLIAPSIVITSAHC 62
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical
protein D2023.2 protein.
Length = 1175
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 93 VPIETNYHEVIGIPMAMELKSAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTS 272
+PI + H+ G +A L+ A+ GAD A + S++G+ + P + A+V +L G
Sbjct: 762 IPIHVHTHDTSGAGVAAMLECAKAGADVVDAAV--DSMSGMTSQPSMGAIVASL-QGTKH 818
Query: 273 MCGASL 290
G SL
Sbjct: 819 DTGLSL 824
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +3
Query: 93 VPIETNYHEVIGIPMAMELKSAEEGADFDGARIVGGSVAGLGTHPHLAAMVITLTDGRTS 272
+PI + H+ G +A L+ A+ GAD A + S++G+ + P + A+V +L G
Sbjct: 762 IPIHVHTHDTSGAGVAAMLECAKAGADVVDAAV--DSMSGMTSQPSMGAIVASL-QGTKH 818
Query: 273 MCGASL 290
G SL
Sbjct: 819 DTGLSL 824
>Z50795-1|CAA90662.1| 502|Caenorhabditis elegans Hypothetical
protein R166.1 protein.
Length = 502
Score = 31.9 bits (69), Expect = 0.49
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 467 GYDYPRTGRIHKCDPADLPAPLTSP 541
GY+Y ++ R CDPADL +P++SP
Sbjct: 430 GYNYAKS-RKRPCDPADLHSPISSP 453
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 31.5 bits (68), Expect = 0.65
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 380 SGAETQLKRASLSAPGPPAVSRGHGASVA-QQGGSAHGGATVGQSNHHSGKMWMSA*PRH 204
+ A L S P PPA S H S GGS+ GG + G S+ G +A
Sbjct: 144 ASAPVSLPAPSYGGPPPPAPSFSHAPSGGYSSGGSSGGGYSSGGSSGGGGYAGGAAAAGA 203
Query: 203 TASYDPGAVEVSA 165
TA+ A E SA
Sbjct: 204 TAAQVDEASETSA 216
>Z78201-3|CAD36504.1| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 422 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 565
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 773 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 823
>Z78199-3|CAB01577.2| 1066|Caenorhabditis elegans Hypothetical
protein K12F2.2a protein.
Length = 1066
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 422 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 565
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 773 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 823
>Z78199-2|CAB54275.1| 582|Caenorhabditis elegans Hypothetical
protein K12F2.2b protein.
Length = 582
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 422 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 565
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 289 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 339
>AF108229-2|AAF17301.1| 582|Caenorhabditis elegans VAB-8S protein.
Length = 582
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 422 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 565
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 289 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 339
>AF108229-1|AAF17300.1| 1066|Caenorhabditis elegans VAB-8L protein.
Length = 1066
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +2
Query: 422 SNARQLQHGQSSQRRGYDYPRTGRIHKCDP--ADLPA-PLTSPQQPIRGYL 565
S ARQLQH S RG R+ H+ DP A LP+ P S ++ I G L
Sbjct: 773 SIARQLQHFSLSPCRGGRTHRSVSTHRIDPPNASLPSTPTMSHKKVIGGSL 823
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 272 HVRSLPAEPHSLRDR-GSLLEDQERSRTHASIGFRHHSVLHWWIQN*H*QCSNARQLQHG 448
HV + PA+ S+ R G+ L R A++ R+ ++ Q NA H
Sbjct: 218 HVDNSPAQVQSITIRQGNSLAPVYR----AALTRRYQCGYEYYAGQWQCQLGNA-YFYHI 272
Query: 449 QSSQRRGYDYPRTGRIHKCDPADLPAPLTSPQQPI 553
G+++ RTGR PAP T+ Q P+
Sbjct: 273 DGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPV 307
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 272 HVRSLPAEPHSLRDR-GSLLEDQERSRTHASIGFRHHSVLHWWIQN*H*QCSNARQLQHG 448
HV + PA+ S+ R G+ L R A++ R+ ++ Q NA H
Sbjct: 218 HVDNSPAQVQSITIRQGNSLAPVYR----AALTRRYQCGYEYYAGQWQCQLGNA-YFYHI 272
Query: 449 QSSQRRGYDYPRTGRIHKCDPADLPAPLTSPQQPI 553
G+++ RTGR PAP T+ Q P+
Sbjct: 273 DGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPV 307
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical
protein T25C12.3 protein.
Length = 2103
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 1/95 (1%)
Frame = +2
Query: 272 HVRSLPAEPHSLRDR-GSLLEDQERSRTHASIGFRHHSVLHWWIQN*H*QCSNARQLQHG 448
HV + PA+ S+ R G+ L R A++ R+ ++ Q NA H
Sbjct: 218 HVDNSPAQVQSITIRQGNSLAPVYR----AALTRRYQCGYEYYAGQWQCQLGNA-YFYHI 272
Query: 449 QSSQRRGYDYPRTGRIHKCDPADLPAPLTSPQQPI 553
G+++ RTGR PAP T+ Q P+
Sbjct: 273 DGVDANGFNFRRTGRFSCMQLLTSPAPPTTTQAPV 307
>U42439-8|AAM98032.1| 431|Caenorhabditis elegans Hypothetical
protein F19C7.8a protein.
Length = 431
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 248 YSDRRSHLHVRSLPAEPHSLR---DRGSLLEDQERSRTHASIGFRHH 379
++ R H R LPA H+LR GSL+ +E TH G+ H+
Sbjct: 30 FASSRPHYERRQLPAMQHTLRHNHSMGSLMGPRELPFTH---GYHHN 73
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,199,145
Number of Sequences: 27780
Number of extensions: 297096
Number of successful extensions: 1012
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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