Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18m11f
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02478-1|AAC50059.1| 1612|Homo sapiens AF-6 protein. 36 0.20
AL731868-4|CAI40827.1| 184|Homo sapiens myeloid/lymphoid or mix... 36 0.20
AL731868-3|CAI40826.1| 1612|Homo sapiens myeloid/lymphoid or mix... 36 0.20
AL049698-3|CAI42814.1| 1612|Homo sapiens myeloid/lymphoid or mix... 36 0.20
AL009178-4|CAI20903.1| 184|Homo sapiens myeloid/lymphoid or mix... 36 0.20
AL009178-3|CAI20902.1| 1612|Homo sapiens myeloid/lymphoid or mix... 36 0.20
AB011399-3|BAA32485.1| 1611|Homo sapiens AF-6 protein. 36 0.20
AB011399-2|BAA32484.1| 1816|Homo sapiens AF-6 protein. 36 0.20
AB011399-1|BAA32483.1| 1743|Homo sapiens AF-6 protein. 36 0.20
U42390-1|AAC34245.1| 2861|Homo sapiens Trio protein. 32 1.8
BT007373-1|AAP36037.1| 346|Homo sapiens ring finger protein 28 ... 32 1.8
BC035585-1|AAH35585.1| 1627|Homo sapiens Similar to triple funct... 32 1.8
AJ291713-1|CAC33173.1| 340|Homo sapiens ring finger protein 28 ... 32 1.8
AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein. 32 1.8
AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domai... 32 1.8
BC080529-1|AAH80529.1| 353|Homo sapiens tripartite motif-contai... 32 2.4
AL391650-4|CAI17133.1| 353|Homo sapiens tripartite motif-contai... 32 2.4
AK056942-1|BAB71318.1| 353|Homo sapiens protein ( Homo sapiens ... 32 2.4
AJ276484-1|CAC81706.1| 353|Homo sapiens muscle specific RING fi... 32 2.4
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.4
AF353673-1|AAK39519.1| 353|Homo sapiens iris ring finger protei... 32 2.4
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 32 2.4
X82260-1|CAA57714.1| 587|Homo sapiens RanGAP1 protein. 30 7.4
CR456557-1|CAG30443.1| 587|Homo sapiens RANGAP1 protein. 30 7.4
BC041396-1|AAH41396.1| 587|Homo sapiens RANGAP1 protein protein. 30 7.4
BC014044-1|AAH14044.1| 587|Homo sapiens Ran GTPase activating p... 30 7.4
AL035681-3|CAB63073.1| 587|Homo sapiens Ran GTPase activating p... 30 7.4
AB058738-1|BAB47464.1| 623|Homo sapiens KIAA1835 protein protein. 30 7.4
BX537611-1|CAD97798.1| 657|Homo sapiens hypothetical protein pr... 30 9.8
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 9.8
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 9.8
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 9.8
>U02478-1|AAC50059.1| 1612|Homo sapiens AF-6 protein.
Length = 1612
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 DNMDIKTVLKKMID-MPPEGQDNGETKEQLQGILEKIE-AMSDEEREEFMAKIKQGLMQ 320
D+ + + VLK D +PP+ Q NG K++ +G+++ + +S +E++E + K+ L Q
Sbjct: 120 DDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ 178
>AL731868-4|CAI40827.1| 184|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 DNMDIKTVLKKMID-MPPEGQDNGETKEQLQGILEKIE-AMSDEEREEFMAKIKQGLMQ 320
D+ + + VLK D +PP+ Q NG K++ +G+++ + +S +E++E + K+ L Q
Sbjct: 103 DDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ 161
>AL731868-3|CAI40826.1| 1612|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1612
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 DNMDIKTVLKKMID-MPPEGQDNGETKEQLQGILEKIE-AMSDEEREEFMAKIKQGLMQ 320
D+ + + VLK D +PP+ Q NG K++ +G+++ + +S +E++E + K+ L Q
Sbjct: 120 DDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ 178
>AL049698-3|CAI42814.1| 1612|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1612
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 DNMDIKTVLKKMID-MPPEGQDNGETKEQLQGILEKIE-AMSDEEREEFMAKIKQGLMQ 320
D+ + + VLK D +PP+ Q NG K++ +G+++ + +S +E++E + K+ L Q
Sbjct: 120 DDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ 178
>AL009178-4|CAI20903.1| 184|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 DNMDIKTVLKKMID-MPPEGQDNGETKEQLQGILEKIE-AMSDEEREEFMAKIKQGLMQ 320
D+ + + VLK D +PP+ Q NG K++ +G+++ + +S +E++E + K+ L Q
Sbjct: 103 DDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ 161
>AL009178-3|CAI20902.1| 1612|Homo sapiens myeloid/lymphoid or
mixed-lineage leukemia (trithorax homolog, Drosophila);
tra protein.
Length = 1612
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 DNMDIKTVLKKMID-MPPEGQDNGETKEQLQGILEKIE-AMSDEEREEFMAKIKQGLMQ 320
D+ + + VLK D +PP+ Q NG K++ +G+++ + +S +E++E + K+ L Q
Sbjct: 120 DDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ 178
>AB011399-3|BAA32485.1| 1611|Homo sapiens AF-6 protein.
Length = 1611
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 DNMDIKTVLKKMID-MPPEGQDNGETKEQLQGILEKIE-AMSDEEREEFMAKIKQGLMQ 320
D+ + + VLK D +PP+ Q NG K++ +G+++ + +S +E++E + K+ L Q
Sbjct: 120 DDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ 178
>AB011399-2|BAA32484.1| 1816|Homo sapiens AF-6 protein.
Length = 1816
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 DNMDIKTVLKKMID-MPPEGQDNGETKEQLQGILEKIE-AMSDEEREEFMAKIKQGLMQ 320
D+ + + VLK D +PP+ Q NG K++ +G+++ + +S +E++E + K+ L Q
Sbjct: 120 DDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ 178
>AB011399-1|BAA32483.1| 1743|Homo sapiens AF-6 protein.
Length = 1743
Score = 35.5 bits (78), Expect = 0.20
Identities = 18/59 (30%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 150 DNMDIKTVLKKMID-MPPEGQDNGETKEQLQGILEKIE-AMSDEEREEFMAKIKQGLMQ 320
D+ + + VLK D +PP+ Q NG K++ +G+++ + +S +E++E + K+ L Q
Sbjct: 120 DDREGRFVLKNENDAIPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ 178
>U42390-1|AAC34245.1| 2861|Homo sapiens Trio protein.
Length = 2861
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 57 QQQKKMADEVEKPTVSLNLGGAFSEKVSEIVDNMDIKTVLKKMIDMPPEGQDNGETKEQL 236
Q+ K A +++ + L++ F +K + + N+D +D+P E QD +
Sbjct: 369 QEWKAFAAALDERSTLLDMSSIFHQKAEKYMSNVDSWCKACGEVDLPSELQDLEDAIHHH 428
Query: 237 QGILEKIEAMSDEEREE 287
QGI E I E ++
Sbjct: 429 QGIYEHITLAYSEVSQD 445
>BT007373-1|AAP36037.1| 346|Homo sapiens ring finger protein 28
protein.
Length = 346
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 144 IVDNMDIKTVLKKMIDMPPEGQDNG-ETKEQLQGILEKIEAMSDEEREEFMAKIKQGLMQ 320
+ N ++T++ ++ D ++N + KE+L + + A+ DE++ E + +I Q +
Sbjct: 178 VAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEE 237
Query: 321 KLNF 332
KL+F
Sbjct: 238 KLSF 241
>BC035585-1|AAH35585.1| 1627|Homo sapiens Similar to triple
functional domain (PTPRF interacting) protein.
Length = 1627
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 57 QQQKKMADEVEKPTVSLNLGGAFSEKVSEIVDNMDIKTVLKKMIDMPPEGQDNGETKEQL 236
Q+ K A +++ + L++ F +K + + N+D +D+P E QD +
Sbjct: 369 QEWKAFAAALDERSTLLDMSSIFHQKAEKYMSNVDSWCKACGEVDLPSELQDLEDAIHHH 428
Query: 237 QGILEKIEAMSDEEREE 287
QGI E I E ++
Sbjct: 429 QGIYEHITLAYSEVSQD 445
>AJ291713-1|CAC33173.1| 340|Homo sapiens ring finger protein 28
protein.
Length = 340
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 144 IVDNMDIKTVLKKMIDMPPEGQDNG-ETKEQLQGILEKIEAMSDEEREEFMAKIKQGLMQ 320
+ N ++T++ ++ D ++N + KE+L + + A+ DE++ E + +I Q +
Sbjct: 165 VAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEE 224
Query: 321 KLNF 332
KL+F
Sbjct: 225 KLSF 228
>AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.
Length = 3038
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 57 QQQKKMADEVEKPTVSLNLGGAFSEKVSEIVDNMDIKTVLKKMIDMPPEGQDNGETKEQL 236
Q+ K A +++ + L++ F +K + + N+D +D+P E QD +
Sbjct: 369 QEWKAFAAALDERSTLLDMSSIFHQKAEKYMSNVDSWCKACGEVDLPSELQDLEDAIHHH 428
Query: 237 QGILEKIEAMSDEEREE 287
QGI E I E ++
Sbjct: 429 QGIYEHITLAYSEVSQD 445
>AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domain
(PTPRF interacting) variant protein.
Length = 2202
Score = 32.3 bits (70), Expect = 1.8
Identities = 19/77 (24%), Positives = 35/77 (45%)
Frame = +3
Query: 57 QQQKKMADEVEKPTVSLNLGGAFSEKVSEIVDNMDIKTVLKKMIDMPPEGQDNGETKEQL 236
Q+ K A +++ + L++ F +K + + N+D +D+P E QD +
Sbjct: 67 QEWKAFAAALDERSTLLDMSSIFHQKAEKYMSNVDSWCKACGEVDLPSELQDLEDAIHHH 126
Query: 237 QGILEKIEAMSDEEREE 287
QGI E I E ++
Sbjct: 127 QGIYEHITLAYSEVSQD 143
>BC080529-1|AAH80529.1| 353|Homo sapiens tripartite
motif-containing 63 protein.
Length = 353
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 144 IVDNMDIKTVLKKMIDMPPEGQDNG-ETKEQLQGILEKIEAMSDEEREEFMAKIKQGLMQ 320
+ N ++T++ ++ D ++N + KE+L + + A+ DE++ E + +I Q +
Sbjct: 178 VAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEK 237
Query: 321 KLNF 332
KL+F
Sbjct: 238 KLSF 241
>AL391650-4|CAI17133.1| 353|Homo sapiens tripartite
motif-containing 63 protein.
Length = 353
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 144 IVDNMDIKTVLKKMIDMPPEGQDNG-ETKEQLQGILEKIEAMSDEEREEFMAKIKQGLMQ 320
+ N ++T++ ++ D ++N + KE+L + + A+ DE++ E + +I Q +
Sbjct: 178 VAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEK 237
Query: 321 KLNF 332
KL+F
Sbjct: 238 KLSF 241
>AK056942-1|BAB71318.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ32380 fis, clone SKMUS1000064, moderately
similar to Mus musculus RING-finger protein MURF mRNA.
).
Length = 353
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 144 IVDNMDIKTVLKKMIDMPPEGQDNG-ETKEQLQGILEKIEAMSDEEREEFMAKIKQGLMQ 320
+ N ++T++ ++ D ++N + KE+L + + A+ DE++ E + +I Q +
Sbjct: 178 VAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEK 237
Query: 321 KLNF 332
KL+F
Sbjct: 238 KLSF 241
>AJ276484-1|CAC81706.1| 353|Homo sapiens muscle specific RING
finger 2 (MURF2) protein.
Length = 353
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 144 IVDNMDIKTVLKKMIDMPPEGQDNG-ETKEQLQGILEKIEAMSDEEREEFMAKIKQGLMQ 320
+ N ++T++ ++ D ++N + KE+L + + A+ DE++ E + +I Q +
Sbjct: 178 VAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEK 237
Query: 321 KLNF 332
KL+F
Sbjct: 238 KLSF 241
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -1
Query: 276 PRRTLLRFSLRSPAIAPSFHHCPVPRVACQSFSSKPSLCPYYQRSRTPFRRKRRLSSA 103
PRR + SP PS P PR P P ++RSR+P RR+RR S++
Sbjct: 298 PRRRHRSDKMYSPRRRPSPRRRPSPRRRTPPRRMPPP--PRHRRSRSPVRRRRRSSAS 353
>AF353673-1|AAK39519.1| 353|Homo sapiens iris ring finger protein
protein.
Length = 353
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +3
Query: 144 IVDNMDIKTVLKKMIDMPPEGQDNG-ETKEQLQGILEKIEAMSDEEREEFMAKIKQGLMQ 320
+ N ++T++ ++ D ++N + KE+L + + A+ DE++ E + +I Q +
Sbjct: 178 VAGNDRVQTIITQLEDSRRVTKENSHQVKEELSQKFDTLYAILDEKKSELLQRITQEQEK 237
Query: 321 KLNF 332
KL+F
Sbjct: 238 KLSF 241
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 31.9 bits (69), Expect = 2.4
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -1
Query: 276 PRRTLLRFSLRSPAIAPSFHHCPVPRVACQSFSSKPSLCPYYQRSRTPFRRKRRLSSA 103
PRR + SP PS P PR P P ++RSR+P RR+RR S++
Sbjct: 298 PRRRHRSDKMYSPRRRPSPRRRPSPRRRTPPRRMPPP--PRHRRSRSPVRRRRRSSAS 353
>X82260-1|CAA57714.1| 587|Homo sapiens RanGAP1 protein.
Length = 587
Score = 30.3 bits (65), Expect = 7.4
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +3
Query: 72 MADEVEKPTVSLN---LGGAFSEKVSEIVDNMDIKTVLKKMID-----MPPEGQDNGETK 227
MAD+ E + LN LG E++ E+++ ++ VL + D EG++ E
Sbjct: 317 MADKAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEEEA 376
Query: 228 EQLQGILEKIEAMSDEEREEFMAKIKQG 311
E+ + E+ E +EE EE + QG
Sbjct: 377 EEEEEEDEEEEEEEEEEEEEEPQQRGQG 404
>CR456557-1|CAG30443.1| 587|Homo sapiens RANGAP1 protein.
Length = 587
Score = 30.3 bits (65), Expect = 7.4
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +3
Query: 72 MADEVEKPTVSLN---LGGAFSEKVSEIVDNMDIKTVLKKMID-----MPPEGQDNGETK 227
MAD+ E + LN LG E++ E+++ ++ VL + D EG++ E
Sbjct: 317 MADKAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEEEA 376
Query: 228 EQLQGILEKIEAMSDEEREEFMAKIKQG 311
E+ + E+ E +EE EE + QG
Sbjct: 377 EEEEEEDEEEEEEEEEEEEEEPQQRGQG 404
>BC041396-1|AAH41396.1| 587|Homo sapiens RANGAP1 protein protein.
Length = 587
Score = 30.3 bits (65), Expect = 7.4
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +3
Query: 72 MADEVEKPTVSLN---LGGAFSEKVSEIVDNMDIKTVLKKMID-----MPPEGQDNGETK 227
MAD+ E + LN LG E++ E+++ ++ VL + D EG++ E
Sbjct: 317 MADKAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEEEA 376
Query: 228 EQLQGILEKIEAMSDEEREEFMAKIKQG 311
E+ + E+ E +EE EE + QG
Sbjct: 377 EEEEEEDEEEEEEEEEEEEEEPQQRGQG 404
>BC014044-1|AAH14044.1| 587|Homo sapiens Ran GTPase activating
protein 1 protein.
Length = 587
Score = 30.3 bits (65), Expect = 7.4
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +3
Query: 72 MADEVEKPTVSLN---LGGAFSEKVSEIVDNMDIKTVLKKMID-----MPPEGQDNGETK 227
MAD+ E + LN LG E++ E+++ ++ VL + D EG++ E
Sbjct: 317 MADKAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEEEA 376
Query: 228 EQLQGILEKIEAMSDEEREEFMAKIKQG 311
E+ + E+ E +EE EE + QG
Sbjct: 377 EEEEEEDEEEEEEEEEEEEEEPQQRGQG 404
>AL035681-3|CAB63073.1| 587|Homo sapiens Ran GTPase activating
protein 1 protein.
Length = 587
Score = 30.3 bits (65), Expect = 7.4
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +3
Query: 72 MADEVEKPTVSLN---LGGAFSEKVSEIVDNMDIKTVLKKMID-----MPPEGQDNGETK 227
MAD+ E + LN LG E++ E+++ ++ VL + D EG++ E
Sbjct: 317 MADKAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEEEA 376
Query: 228 EQLQGILEKIEAMSDEEREEFMAKIKQG 311
E+ + E+ E +EE EE + QG
Sbjct: 377 EEEEEEDEEEEEEEEEEEEEEPQQRGQG 404
>AB058738-1|BAB47464.1| 623|Homo sapiens KIAA1835 protein protein.
Length = 623
Score = 30.3 bits (65), Expect = 7.4
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +3
Query: 72 MADEVEKPTVSLN---LGGAFSEKVSEIVDNMDIKTVLKKMID-----MPPEGQDNGETK 227
MAD+ E + LN LG E++ E+++ ++ VL + D EG++ E
Sbjct: 353 MADKAELEKLDLNGNTLGEEGCEQLQEVLEGFNMAKVLASLSDDEDEEEEEEGEEEEEEA 412
Query: 228 EQLQGILEKIEAMSDEEREEFMAKIKQG 311
E+ + E+ E +EE EE + QG
Sbjct: 413 EEEEEEDEEEEEEEEEEEEEEPQQRGQG 440
>BX537611-1|CAD97798.1| 657|Homo sapiens hypothetical protein
protein.
Length = 657
Score = 29.9 bits (64), Expect = 9.8
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = -3
Query: 214 LSCPSGGMSIIFFKTVFMSILSTISDTFSEKAPPKFS---ETVGFSTSSAI 71
L+ PSGG++ I K V +S++SD P ++ T GFST S +
Sbjct: 569 LAIPSGGLTEICRKPVSPGCISSVSDWLISIGLPMYAGTLSTAGFSTLSQV 619
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.8
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -1
Query: 273 RRTLLRFSLRSPAIAPSFHHCPVPRVACQSFSSKPSLCPYYQRSRTPFRRKRRLSSA 103
RR R SP PS P PR P P ++RSR+P RR+RR S++
Sbjct: 300 RRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPP--PRHRRSRSPVRRRRRSSAS 354
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.8
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -1
Query: 273 RRTLLRFSLRSPAIAPSFHHCPVPRVACQSFSSKPSLCPYYQRSRTPFRRKRRLSSA 103
RR R SP PS P PR P P ++RSR+P RR+RR S++
Sbjct: 300 RRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPP--PRHRRSRSPVRRRRRSSAS 354
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.8
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = -1
Query: 273 RRTLLRFSLRSPAIAPSFHHCPVPRVACQSFSSKPSLCPYYQRSRTPFRRKRRLSSA 103
RR R SP PS P PR P P ++RSR+P RR+RR S++
Sbjct: 300 RRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPP--PRHRRSRSPVRRRRRSSAS 354
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,230,014
Number of Sequences: 237096
Number of extensions: 1767208
Number of successful extensions: 4720
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4720
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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