Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18m09f
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70287-10|CAA94299.2|  339|Caenorhabditis elegans Hypothetical p...    33   0.29 
AL132904-18|CAC35853.1|  457|Caenorhabditis elegans Hypothetical...    32   0.38 
AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical ...    30   2.0  
AF023454-1|AAB82794.1|  707|Caenorhabditis elegans protein phosp...    29   3.6  
AF003389-11|AAC71139.2|  707|Caenorhabditis elegans Phosphatase ...    29   3.6  
Z81071-2|CAB03012.1|  618|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr...    28   8.2  
AL033514-34|CAA22113.1|  463|Caenorhabditis elegans Hypothetical...    28   8.2  
AL033514-33|CAB54500.1|  480|Caenorhabditis elegans Hypothetical...    28   8.2  
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n...    28   8.2  
AF160493-1|AAD43348.1|  465|Caenorhabditis elegans DNA-binding p...    28   8.2  
AF160492-1|AAD43347.1|  463|Caenorhabditis elegans DNA-binding p...    28   8.2  

>Z70287-10|CAA94299.2|  339|Caenorhabditis elegans Hypothetical
           protein R09E10.4a protein.
          Length = 339

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
 Frame = +3

Query: 390 KWHKITYKQYQDRVRIIAKAFLKLGLDR--YHSVSILGFNSEQWFIADLXXXXXXXXXXX 563
           +W  ITY Q  +    +++A  KLG+D     ++ I   N  +W ++D+           
Sbjct: 109 EWEWITYDQAFEISDNVSQAIRKLGIDTGDETNIGIYSKNRPEWILSDMAIHNFSNVSVP 168

Query: 564 XXTTNSADACFHCLESSRANICAVQDKKQLDKILSVKHKLPLLKAIVQWEGPVD 725
              T + D   +       ++     + +  +++  K  L  LK IVQ++   D
Sbjct: 169 LYDTITNDDMHYITNLCEISLIFADSEDKTTQLVRDKSYLSNLKYIVQFDNVSD 222


>AL132904-18|CAC35853.1|  457|Caenorhabditis elegans Hypothetical
           protein Y111B2A.24 protein.
          Length = 457

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 475 TIQSVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASN 609
           ++ S+ + ST     +PIL+ STL    + Y+ P RP   S+AS+
Sbjct: 150 SVTSIPAASTSTTTPTPILRPSTLQIPAQSYVAPPRPRIGSSASS 194


>AF038604-2|AAB92013.1|  468|Caenorhabditis elegans Hypothetical
           protein B0546.3 protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 386 WEMAQNHLQAIPGSCQNNSKSFLETGSRQVPFSQYPRFQL 505
           WE  Q    AI  S Q N++S LE G  +    QYP  +L
Sbjct: 137 WETLQRFNLAIVASIQGNNESLLEMGFTRELGHQYPGIRL 176


>AF023454-1|AAB82794.1|  707|Caenorhabditis elegans protein
           phosphatase with EF-hands protein.
          Length = 707

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +2

Query: 158 KQHASGEWSQSTNILKRTGSSSARRKLHNSNSWMSRQTSHRPPRLSSGASYISAWITKSN 337
           +Q+ S E  +ST     T SSS R   +++N   S  + ++    SS   + S    KSN
Sbjct: 9   RQNPSTELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSN 68

Query: 338 YRQ 346
            ++
Sbjct: 69  SKK 71


>AF003389-11|AAC71139.2|  707|Caenorhabditis elegans Phosphatase
           with ef hands protein1, isoform a protein.
          Length = 707

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +2

Query: 158 KQHASGEWSQSTNILKRTGSSSARRKLHNSNSWMSRQTSHRPPRLSSGASYISAWITKSN 337
           +Q+ S E  +ST     T SSS R   +++N   S  + ++    SS   + S    KSN
Sbjct: 9   RQNPSTELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSN 68

Query: 338 YRQ 346
            ++
Sbjct: 69  SKK 71


>Z81071-2|CAB03012.1|  618|Caenorhabditis elegans Hypothetical
           protein F28F8.2 protein.
          Length = 618

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 405 TYKQYQDRVRIIAKAFLKLGLDRYHSVSILGFNSEQWFI 521
           TY+++   VR +A +   LGL++   V + G N  +W +
Sbjct: 88  TYEEFYHDVRQMAASLYTLGLEKGDRVGVWGPNYYEWVV 126


>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
           protein C01C7.1 protein.
          Length = 1043

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +2

Query: 218 SSARRKLHNSNSWMSRQTSHRPPRLSSGASYISAWITKSNYRQIS*RYSTGHKK 379
           S  R  L + N  +S  T+H+PP  SS A     ++T+   R+I+ + +  H+K
Sbjct: 750 SEDRPLLDSMNRTISSSTTHQPPPQSSEARI--RFMTEQEVRKINEKSAREHRK 801


>AL033514-34|CAA22113.1|  463|Caenorhabditis elegans Hypothetical
           protein Y75B8A.35b protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 484 SVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRG 618
           S SS  +    S PI    T +G       PTR    STASN+ G
Sbjct: 187 SPSSTPSYCCTSGPISPAYTPIGNNANACAPTRSRRTSTASNKSG 231


>AL033514-33|CAB54500.1|  480|Caenorhabditis elegans Hypothetical
           protein Y75B8A.35a protein.
          Length = 480

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 484 SVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRG 618
           S SS  +    S PI    T +G       PTR    STASN+ G
Sbjct: 204 SPSSTPSYCCTSGPISPAYTPIGNNANACAPTRSRRTSTASNKSG 248


>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
           non-receptor tyrosinekinase protein.
          Length = 1043

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +2

Query: 218 SSARRKLHNSNSWMSRQTSHRPPRLSSGASYISAWITKSNYRQIS*RYSTGHKK 379
           S  R  L + N  +S  T+H+PP  SS A     ++T+   R+I+ + +  H+K
Sbjct: 750 SEDRPLLDSMNRTISSSTTHQPPPQSSEARI--RFMTEQEVRKINEKSAREHRK 801


>AF160493-1|AAD43348.1|  465|Caenorhabditis elegans DNA-binding
           protein ZIP-1 protein.
          Length = 465

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 484 SVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRG 618
           S SS  +    S PI    T +G       PTR    STASN+ G
Sbjct: 204 SPSSTPSYCCTSGPISPAYTPIGNNANACAPTRSRRTSTASNKSG 248


>AF160492-1|AAD43347.1|  463|Caenorhabditis elegans DNA-binding
           protein ZIP-1 protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = +1

Query: 484 SVSSVSTLNNGSSPILQLSTLVGMRREYIQPTRPTHASTASNRRG 618
           S SS  +    S PI    T +G       PTR    STASN+ G
Sbjct: 187 SPSSTPSYCCTSGPISPAYTPIGNNANACAPTRSRRTSTASNKSG 231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,633,729
Number of Sequences: 27780
Number of extensions: 399446
Number of successful extensions: 1125
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)