Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18m07r
(845 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 154 1e-38
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 121 1e-28
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 120 2e-28
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 93 6e-20
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 90 3e-19
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 89 6e-19
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 80 3e-16
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 79 8e-16
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 68 1e-12
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 64 2e-11
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 50 4e-07
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 41 3e-04
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 37 0.003
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 30 0.47
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 30 0.47
SPBC3H7.10 |||elongator homolog|Schizosaccharomyces pombe|chr 2|... 29 0.83
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 29 0.83
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 27 3.3
SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|... 26 5.8
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 5.8
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 154 bits (374), Expect = 1e-38
Identities = 70/118 (59%), Positives = 98/118 (83%), Gaps = 1/118 (0%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 664
AGQERFRTITTAYYRG+MGI+L+YDVT++KSF+N++ W N+E++AS +V K+++GNKCD
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 663 LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI-KAKMEKKQEASN 493
+ QRQVS E+G+ LA E +KF+E SAK ++NV+ AF+TLAR+I K K++ + E SN
Sbjct: 126 CEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSN 183
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 121 bits (291), Expect = 1e-28
Identities = 57/140 (40%), Positives = 89/140 (63%), Gaps = 5/140 (3%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 664
AGQER+R IT+AYYRG++G ++VYD+T + SF+N+ W++ + E+A +++ M++GNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 663 LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI-----KAKMEKKQEA 499
L R VS E + A E + F+ETSA D+ NVE AF T+ +I +E +
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG 186
Query: 498 SNPSGGRSGVHKPTLNDARK 439
+P+ G++ PT+ND K
Sbjct: 187 VHPTAGQTLNIAPTMNDLNK 206
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 120 bits (290), Expect = 2e-28
Identities = 56/117 (47%), Positives = 81/117 (69%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 664
AGQERFRTIT++YYRG+ GI++VYDVT++ SF N+K W++ I+ A V ++++GNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 124
Query: 663 LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASN 493
+ ++ V ++ A I F+ETSAKDS NVE AF T++R IK +M AS+
Sbjct: 125 MVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASS 181
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 92.7 bits (220), Expect = 6e-20
Identities = 45/103 (43%), Positives = 66/103 (64%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 664
AGQERFR++ +Y R S ++VYD+TN SF N + WI ++ DV +++GNK D
Sbjct: 68 AGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTD 127
Query: 663 LDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLAR 535
L +RQV++E GE+ A E +I +ETSAK NV+ F +A+
Sbjct: 128 LADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQ 170
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 90.2 bits (214), Expect = 3e-19
Identities = 45/111 (40%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 664
AGQE+FR++ YYRG+ G +LVYDVTN+ SFE + +W+ +I A + + ++ G+K D
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSD 129
Query: 663 LDSQRQVSKERGEQLAIEYQIKFV-ETSAKDSLNVEYAFYTLARDIKAKME 514
L +QRQVS E + E I ETS+ NVE F ++ I ++E
Sbjct: 130 LQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIE 180
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 89.4 bits (212), Expect = 6e-19
Identities = 48/115 (41%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL-GNKC 667
AGQE + + Y R G +LVY++T+ SF+ I + + I D ++L NKC
Sbjct: 64 AGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKC 123
Query: 666 DLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQE 502
DL+++R VS+ GEQLA +VETSAK LNVE AFY+L R I+ + K +E
Sbjct: 124 DLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIR-RYNKSEE 177
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 80.2 bits (189), Expect = 3e-16
Identities = 47/137 (34%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 664
AGQER++++ YYR + ++VYD+T S E K+WI+ ++ A + + GNK D
Sbjct: 72 AGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLD 131
Query: 663 LDSQRQ-VSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNPS 487
L +R+ V K E A E + F ETSAK + NV F +A+ K +E K + +
Sbjct: 132 LAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAK--KLPLEDKLNQARGA 189
Query: 486 GGRSGVHKPTLNDARKP 436
R GV+ A +P
Sbjct: 190 VNR-GVNLSEARPAAQP 205
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 79.0 bits (186), Expect = 8e-16
Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEK----MILG 676
AGQERF+++ A+YRG+ +LVYDV N KSFE + +W AS + ++LG
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLG 124
Query: 675 NKCDLDSQ-RQVSKERGEQLA-IEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQE 502
NK D++ Q R VSK + +I + ETSAK+++NV+ AF T+A+ M+
Sbjct: 125 NKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDI 184
Query: 501 ASN 493
A++
Sbjct: 185 AAD 187
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 68.1 bits (159), Expect = 1e-12
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKC 667
AGQ+ + + + + G G +LVY +T++ SFE +K I + + V +++GNK
Sbjct: 62 AGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKS 121
Query: 666 DLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNPS 487
DL QR V+ E G+ LA E++ + E SA+ + NV AF + +I EK+ S P
Sbjct: 122 DLHMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEI----EKQANPSPPG 177
Query: 486 GGRSGV 469
G+ V
Sbjct: 178 DGKGCV 183
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 64.5 bits (150), Expect = 2e-11
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD---VEKMILGN 673
AGQERF+++ A+YRG+ ++VY+V N KSF++++NW + S D +I+GN
Sbjct: 65 AGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGN 124
Query: 672 KCDLD-SQRQVSKERG-EQLAIEYQIKFV--ETSAKDSLNVEYAFYTLAR 535
+ D D S+R VS R + ++ + E SAK++ NV F T++R
Sbjct: 125 QIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 50.0 bits (114), Expect = 4e-07
Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = -3
Query: 843 AGQERFRTITTAYY-RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC 667
AGQE+ + YY +G GI++ +DVT+ +++N+ +W R++ ++ ++ GNK
Sbjct: 66 AGQEKLGGLRDGYYIQGQCGIIM-FDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKV 123
Query: 666 DLDSQRQVSKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDI 529
D+ +R+V K + + +++ + SAK + N E F LAR +
Sbjct: 124 DV-KERKV-KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 40.7 bits (91), Expect = 3e-04
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFEN-IKNWIRNIEENASADVEKMILGNKC 667
AGQE + + + Y + IM+ + V + S EN I W+ + N V+ +++ KC
Sbjct: 69 AGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPG-VKLVLVALKC 127
Query: 666 DL--------DSQRQVSKERGEQLAIEYQ-IKFVETSAKDSLNVEYAFYTLAR 535
DL D + + E G A + ++++E SAK + V AF AR
Sbjct: 128 DLRGADEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 37.1 bits (82), Expect = 0.003
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKC 667
AGQE + + Y + ++ + VT+ SFEN+K W + + V +I+G +
Sbjct: 59 AGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPG-VPCLIVGTQI 117
Query: 666 DL------------DSQRQVSKERGEQLAIEY-QIKFVETSAKDSLNVEYAF 550
DL Q ++ E+GE+LA E +K+VE SA ++ F
Sbjct: 118 DLRDDPSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 29.9 bits (64), Expect = 0.47
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 13/111 (11%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKC 667
AGQE + + Y S I+L + + S N+ + W ++ +++G K
Sbjct: 72 AGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPR-TPIVLVGLKA 130
Query: 666 DLDSQRQ------------VSKERGEQLAIEYQIKFVETSAKDSLNVEYAF 550
DL R V+ ++ + +A+ +VE SAK++ V F
Sbjct: 131 DLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.9 bits (64), Expect = 0.47
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 494 LLASCFFSIFAFMSLAKV*NAYSTF-NESFADVSTNF 601
+L S FFS ++LA + YS F N SF D T+F
Sbjct: 6 ILLSLFFSFERLLTLANANSLYSPFNNSSFVDSDTSF 42
>SPBC3H7.10 |||elongator homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 29.1 bits (62), Expect = 0.83
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 389 LRPPPQPYSNIVVL*TAHLDYIFLPTLLDGALTSCGDETCFCIFISKTTNTYLISSLK 216
LRP P+P+S ++L T FL + TCF F SKT + + IS K
Sbjct: 8 LRPIPEPFSLTLLLGTRETPVTFLFHYYLYHALKAKESTCFLTF-SKTLDEHAISMRK 64
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 29.1 bits (62), Expect = 0.83
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 843 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKC 667
AGQE + + Y + I++ + + + S EN+ WI I +V +++G K
Sbjct: 64 AGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEI-NTLCPNVPFILVGMKA 122
Query: 666 DLDS 655
DL S
Sbjct: 123 DLRS 126
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -3
Query: 789 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 676
GI L+ + E ++ +++ I+ENA + V +++LG
Sbjct: 947 GINLITSLIKEYGKNSVLRYMKAIQENAESAVRQLLLG 984
>SPAC27D7.08c |||DUF890 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 385
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 492 DYSLPVSFPFSLLCPWLKCK-MHIQHLTSLL 581
DYSL V FP + LCP + + +I+++ LL
Sbjct: 35 DYSLRVEFPENRLCPMVPNRATYIRYIHDLL 65
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 525 AKMEKKQEASNPSGGRSGVHKPT 457
A + +ASNP+G S H+PT
Sbjct: 546 ASLAHLSQASNPNGSSSAPHRPT 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,189,351
Number of Sequences: 5004
Number of extensions: 65657
Number of successful extensions: 211
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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