Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18m06f
(766 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131473-1|BAD18618.1| 388|Homo sapiens protein ( Homo sapiens ... 33 0.85
BC047536-1|AAH47536.1| 668|Homo sapiens SCEL protein protein. 31 6.0
D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein. 30 7.9
BC073875-1|AAH73875.1| 402|Homo sapiens PPIG protein protein. 30 7.9
BC017815-1|AAH17815.1| 327|Homo sapiens Unknown (protein for IM... 30 7.9
AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose) polym... 30 7.9
AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein. 30 7.9
AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribos... 30 7.9
>AK131473-1|BAD18618.1| 388|Homo sapiens protein ( Homo sapiens
cDNA FLJ16641 fis, clone TESTI4028958. ).
Length = 388
Score = 33.5 bits (73), Expect = 0.85
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 488 RKRHSLSLDLYGESNQ-CIEKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERF 664
++ L LD+ E +Q I+K K + +Q+ SDLIT + D + T E+
Sbjct: 121 KEETKLQLDIEKEKHQDVIQKYKKEQEELQMKISDLITGATR-----DLRQEVTTLKEKL 175
Query: 665 HKTKTQDNKQSN 700
HK+ T+ ++SN
Sbjct: 176 HKSHTRYTEESN 187
>BC047536-1|AAH47536.1| 668|Homo sapiens SCEL protein protein.
Length = 668
Score = 30.7 bits (66), Expect = 6.0
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 302 SATSTVRK*KMAKFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQ 481
SAT+ V+K + + F P S E G PP+ + +S + +L+Q
Sbjct: 151 SATTPVKKKRQSWFPPP--PPGYNASSSTGTRRREPGV--HPPIPPKPSSPVSSTNQLRQ 206
Query: 482 ANRKRHSLSLDLYGESNQCIEKPKSRE 562
NR+ H +Y E+N+ E+ S E
Sbjct: 207 DNRQIHPPKPGVYTETNRSAERNISEE 233
>D79999-1|BAA11494.2| 1725|Homo sapiens KIAA0177 protein protein.
Length = 1725
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 566 HVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE--TEID 739
HV IA+ D I + ++ D NY K Q S V G+CP+ TE +
Sbjct: 69 HVHIANPDFIWKSIREKRLLDVKNYDPYKPLDITPPPDQKASSSEVKTEGLCPDSATEEE 128
Query: 740 SAFEIID 760
E+ +
Sbjct: 129 DTVELTE 135
>BC073875-1|AAH73875.1| 402|Homo sapiens PPIG protein protein.
Length = 402
Score = 30.3 bits (65), Expect = 7.9
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Frame = +2
Query: 398 ETEDGKTDFP--PLDERRKLSISR---SGRLKQANRKRHSLSLDLYGESNQCIEKPKSRE 562
E E+ KTD P E R LS ++K+ +KRH S S+ S+
Sbjct: 153 EIENQKTDAASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQS 212
Query: 563 YHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDA 712
S +K+++RK H K R HK + + K+S +++
Sbjct: 213 SSDSSDSESATEEKSKKRKKK------HRKNSRKHKKEKKKRKKSKKSES 256
>BC017815-1|AAH17815.1| 327|Homo sapiens Unknown (protein for
IMAGE:4618740) protein.
Length = 327
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 566 HVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE--TEID 739
HV IA+ D I + ++ D NY K Q S V G+CP+ TE +
Sbjct: 68 HVHIANPDFIWKSIREKRLLDVKNYDPYKPLDITPPPDQKASSSEVKTEGLCPDNATEEE 127
Query: 740 SAFEIID 760
E+ +
Sbjct: 128 DTVELTE 134
>AL359763-3|CAI12394.1| 1724|Homo sapiens poly (ADP-ribose)
polymerase family, member 4 protein.
Length = 1724
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 566 HVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE--TEID 739
HV IA+ D I + ++ D NY K Q S V G+CP+ TE +
Sbjct: 68 HVHIANPDFIWKSIREKRLLDVKNYDPYKPLDITPPPDQKASSSEVKTEGLCPDSATEEE 127
Query: 740 SAFEIID 760
E+ +
Sbjct: 128 DTVELTE 134
>AF158255-1|AAD47250.1| 1724|Homo sapiens vault protein protein.
Length = 1724
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 566 HVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE--TEID 739
HV IA+ D I + ++ D NY K Q S V G+CP+ TE +
Sbjct: 68 HVHIANPDFIWKSIREKRLLDVKNYDPYKPLDITPPPDQKASSSEVKTEGLCPDSATEEE 127
Query: 740 SAFEIID 760
E+ +
Sbjct: 128 DTVELTE 134
>AF057160-1|AAC62491.1| 1724|Homo sapiens putative poly(ADP-ribosyl)
transferase protein.
Length = 1724
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 566 HVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE--TEID 739
HV IA+ D I + ++ D NY K Q S V G+CP+ TE +
Sbjct: 68 HVHIANPDFIWKSIREKRLLDVKNYDPYKPLDITPPPDQKASSSEVKTEGLCPDSATEEE 127
Query: 740 SAFEIID 760
E+ +
Sbjct: 128 DTVELTE 134
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,292,296
Number of Sequences: 237096
Number of extensions: 1623011
Number of successful extensions: 3810
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3810
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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