Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18m06f
(766 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132148-1|AAD34736.1| 653|Drosophila melanogaster unknown prot... 38 0.015
AE014297-3634|AAF56342.1| 653|Drosophila melanogaster CG5808-PA... 38 0.015
BT021282-1|AAX33430.1| 991|Drosophila melanogaster RE36502p pro... 33 0.32
BT001509-1|AAN71264.1| 746|Drosophila melanogaster LD40727p pro... 33 0.32
BT001493-1|AAN71248.1| 864|Drosophila melanogaster LD30051p pro... 33 0.32
AE014297-4178|AAN14129.1| 956|Drosophila melanogaster CG12877-P... 33 0.32
AE014297-4177|ABC66193.1| 991|Drosophila melanogaster CG12877-P... 33 0.32
AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-P... 33 0.32
BT001332-1|AAN71087.1| 886|Drosophila melanogaster AT18855p pro... 33 0.57
AY128440-1|AAM75033.1| 552|Drosophila melanogaster LD12356p pro... 32 0.75
AE014298-843|AAF46122.1| 1624|Drosophila melanogaster CG4320-PA ... 32 0.75
Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger... 32 0.99
BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p pro... 32 0.99
AY051832-1|AAK93256.1| 484|Drosophila melanogaster LD33756p pro... 32 0.99
AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB... 32 0.99
AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA... 32 0.99
AY049773-1|AAL12209.1| 1483|Drosophila melanogaster defective tr... 31 1.7
AE014134-3393|AAN11119.2| 1483|Drosophila melanogaster CG31623-P... 31 1.7
AY058523-1|AAL13752.1| 816|Drosophila melanogaster LD23056p pro... 30 3.0
AE014134-2030|AAF53069.1| 816|Drosophila melanogaster CG4713-PA... 30 3.0
BT009935-1|AAQ22404.1| 880|Drosophila melanogaster SD08724p pro... 30 4.0
AF145614-1|AAD38589.1| 537|Drosophila melanogaster BcDNA.GH0316... 30 4.0
AE014297-4668|AAF57089.1| 537|Drosophila melanogaster CG31012-P... 30 4.0
AE014297-4667|AAF57088.1| 545|Drosophila melanogaster CG31012-P... 30 4.0
AE014297-4666|AAN14260.2| 635|Drosophila melanogaster CG31012-P... 30 4.0
AE014297-4665|AAF57087.2| 882|Drosophila melanogaster CG31012-P... 30 4.0
AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 29 7.0
AJ010073-1|CAB45234.1| 614|Drosophila melanogaster XRCC1 protei... 29 7.0
AF132142-1|AAD33589.1| 614|Drosophila melanogaster DNA repair p... 29 7.0
AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule ... 29 7.0
AE014298-727|AAF46025.1| 614|Drosophila melanogaster CG4208-PA ... 29 7.0
AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 29 7.0
AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 29 7.0
AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 29 7.0
AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 29 7.0
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 29 9.2
BT023501-1|AAY84901.1| 919|Drosophila melanogaster LD27033p pro... 29 9.2
AE014296-3476|AAF51681.1| 309|Drosophila melanogaster CG12977-P... 29 9.2
AE014296-1769|AAN11939.1| 919|Drosophila melanogaster CG8108-PB... 29 9.2
AE014296-1768|AAF50193.1| 919|Drosophila melanogaster CG8108-PA... 29 9.2
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 29 9.2
>AF132148-1|AAD34736.1| 653|Drosophila melanogaster unknown
protein.
Length = 653
Score = 37.9 bits (84), Expect = 0.015
Identities = 24/110 (21%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +2
Query: 368 EKRKHSKH--DGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCI 541
E+R+ S++ D + + +++RKLS+ +S + + +++ S S D S++
Sbjct: 543 ERRQQSRNREDHRMDTHSSPNKSHEKKRKLSVEKSKKQAKKSKRAASSSSDSSESSSESE 602
Query: 542 EKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNK 691
S + +SS +D +RK + + +K++ HK+K + N+
Sbjct: 603 SDSTSSDSSEDSSSSSSSSDDRSKRKKSTKSKQKKSKSKSSHKSKKKHNR 652
>AE014297-3634|AAF56342.1| 653|Drosophila melanogaster CG5808-PA
protein.
Length = 653
Score = 37.9 bits (84), Expect = 0.015
Identities = 24/110 (21%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +2
Query: 368 EKRKHSKH--DGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCI 541
E+R+ S++ D + + +++RKLS+ +S + + +++ S S D S++
Sbjct: 543 ERRQQSRNREDHRMDTHSSPNKSHEKKRKLSVEKSKKQAKKSKRAASSSSDSSESSSESE 602
Query: 542 EKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNK 691
S + +SS +D +RK + + +K++ HK+K + N+
Sbjct: 603 SDSTSSDSSEDSSSSSSSSDDRSKRKKSTKSKQKKSKSKSSHKSKKKHNR 652
>BT021282-1|AAX33430.1| 991|Drosophila melanogaster RE36502p
protein.
Length = 991
Score = 33.5 bits (73), Expect = 0.32
Identities = 29/130 (22%), Positives = 51/130 (39%)
Frame = +2
Query: 368 EKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEK 547
EK K + + E K D ++RK S S R K+ N S S S+ +K
Sbjct: 212 EKDKEKSKERDREKEKND----RDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKK 267
Query: 548 PKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE 727
S + H SS + S+ S+++ + + KTK + + + PE
Sbjct: 268 SSSSDKHRDDKSSSSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPE 327
Query: 728 TEIDSAFEII 757
+ D+ ++
Sbjct: 328 ADKDTEAAVL 337
>BT001509-1|AAN71264.1| 746|Drosophila melanogaster LD40727p
protein.
Length = 746
Score = 33.5 bits (73), Expect = 0.32
Identities = 29/130 (22%), Positives = 51/130 (39%)
Frame = +2
Query: 368 EKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEK 547
EK K + + E K D ++RK S S R K+ N S S S+ +K
Sbjct: 21 EKDKEKSKERDREKEKND----RDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKK 76
Query: 548 PKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE 727
S + H SS + S+ S+++ + + KTK + + + PE
Sbjct: 77 SSSSDKHRDDKSSSSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPE 136
Query: 728 TEIDSAFEII 757
+ D+ ++
Sbjct: 137 ADKDTEAAVL 146
>BT001493-1|AAN71248.1| 864|Drosophila melanogaster LD30051p
protein.
Length = 864
Score = 33.5 bits (73), Expect = 0.32
Identities = 29/130 (22%), Positives = 51/130 (39%)
Frame = +2
Query: 368 EKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEK 547
EK K + + E K D ++RK S S R K+ N S S S+ +K
Sbjct: 85 EKDKEKSKERDREKEKND----RDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKK 140
Query: 548 PKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE 727
S + H SS + S+ S+++ + + KTK + + + PE
Sbjct: 141 SSSSDKHRDDKSSSSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPE 200
Query: 728 TEIDSAFEII 757
+ D+ ++
Sbjct: 201 ADKDTEAAVL 210
>AE014297-4178|AAN14129.1| 956|Drosophila melanogaster CG12877-PB,
isoform B protein.
Length = 956
Score = 33.5 bits (73), Expect = 0.32
Identities = 29/130 (22%), Positives = 51/130 (39%)
Frame = +2
Query: 368 EKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEK 547
EK K + + E K D ++RK S S R K+ N S S S+ +K
Sbjct: 212 EKDKEKSKERDREKEKND----RDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKK 267
Query: 548 PKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE 727
S + H SS + S+ S+++ + + KTK + + + PE
Sbjct: 268 SSSSDKHRDDKSSSSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPE 327
Query: 728 TEIDSAFEII 757
+ D+ ++
Sbjct: 328 ADKDTEAAVL 337
>AE014297-4177|ABC66193.1| 991|Drosophila melanogaster CG12877-PC,
isoform C protein.
Length = 991
Score = 33.5 bits (73), Expect = 0.32
Identities = 29/130 (22%), Positives = 51/130 (39%)
Frame = +2
Query: 368 EKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEK 547
EK K + + E K D ++RK S S R K+ N S S S+ +K
Sbjct: 212 EKDKEKSKERDREKEKND----RDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKK 267
Query: 548 PKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE 727
S + H SS + S+ S+++ + + KTK + + + PE
Sbjct: 268 SSSSDKHRDDKSSSSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPE 327
Query: 728 TEIDSAFEII 757
+ D+ ++
Sbjct: 328 ADKDTEAAVL 337
>AE014297-4176|AAF56745.1| 1010|Drosophila melanogaster CG12877-PA,
isoform A protein.
Length = 1010
Score = 33.5 bits (73), Expect = 0.32
Identities = 29/130 (22%), Positives = 51/130 (39%)
Frame = +2
Query: 368 EKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEK 547
EK K + + E K D ++RK S S R K+ N S S S+ +K
Sbjct: 212 EKDKEKSKERDREKEKND----RDKRKSSHSDKERSKERNTSSSSSSKHKSSSSSSSSKK 267
Query: 548 PKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPE 727
S + H SS + S+ S+++ + + KTK + + + PE
Sbjct: 268 SSSSDKHRDDKSSSSRHKSSSSSSSSKSHHHKSSSSSSRSKTKRSSSSSKSAGTSKSEPE 327
Query: 728 TEIDSAFEII 757
+ D+ ++
Sbjct: 328 ADKDTEAAVL 337
>BT001332-1|AAN71087.1| 886|Drosophila melanogaster AT18855p
protein.
Length = 886
Score = 32.7 bits (71), Expect = 0.57
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
++K+K +K DGE D + + +R+K + R+K + RH D E ++ +
Sbjct: 142 AKKKKTTKSDGECSDSEAEGKHKHKRKKHK-HKDIRVKDKEKDRHR-DRDKSKEKDRDRD 199
Query: 545 KPKSREY-HVQIASSDLITDKNQ-RRKSADSNNYIHTKTERFHKTKTQDNKQSNV 703
K K ++ V S + D+++ R KS D +E+ K K++ K+S V
Sbjct: 200 KSKEKDRDRVTDKSKEKDQDRDRDRDKSKDKFTAAQAPSEK-EKEKSESRKRSAV 253
>AY128440-1|AAM75033.1| 552|Drosophila melanogaster LD12356p
protein.
Length = 552
Score = 32.3 bits (70), Expect = 0.75
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = +2
Query: 350 SFFTPSEKRKHSKHDGETEDGKTDFPPLD------ERRKLSISRSGRLKQANRKRHSLSL 511
S+FT K ++S +G E+G+ F P+D RR+L R+ +++ ++H +
Sbjct: 81 SYFTRPGKERYSSAEGSAEEGRQRF-PVDRNSAELRRRRLRFLRNDFVRRHAGRKHQELI 139
Query: 512 DLYG 523
D YG
Sbjct: 140 DPYG 143
>AE014298-843|AAF46122.1| 1624|Drosophila melanogaster CG4320-PA
protein.
Length = 1624
Score = 32.3 bits (70), Expect = 0.75
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Frame = +2
Query: 350 SFFTPSEKRKHSKHDGETEDGKTDFPPLD------ERRKLSISRSGRLKQANRKRHSLSL 511
S+FT K ++S +G E+G+ F P+D RR+L R+ +++ ++H +
Sbjct: 1150 SYFTRPGKERYSSAEGSAEEGRQRF-PVDRNSAELRRRRLRFLRNDFVRRHAGRKHQELI 1208
Query: 512 DLYG 523
D YG
Sbjct: 1209 DPYG 1212
>Z11527-1|CAA77616.1| 614|Drosophila melanogaster CYS3HIS finger
protein protein.
Length = 614
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 617 KSADSNNYIHTKTER-FHKTKTQDNKQSNVNDAGVCPET 730
++ D+ Y HT+TE+ FH + K ++V AG CP +
Sbjct: 267 EAGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRS 305
>BT021256-1|AAX33404.1| 608|Drosophila melanogaster RE58038p
protein.
Length = 608
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 617 KSADSNNYIHTKTER-FHKTKTQDNKQSNVNDAGVCPET 730
++ D+ Y HT+TE+ FH + K ++V AG CP +
Sbjct: 261 EAGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRS 299
>AY051832-1|AAK93256.1| 484|Drosophila melanogaster LD33756p
protein.
Length = 484
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 617 KSADSNNYIHTKTER-FHKTKTQDNKQSNVNDAGVCPET 730
++ D+ Y HT+TE+ FH + K ++V AG CP +
Sbjct: 137 EAGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRS 175
>AE014297-3282|AAO41594.1| 599|Drosophila melanogaster CG4620-PB,
isoform B protein.
Length = 599
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 617 KSADSNNYIHTKTER-FHKTKTQDNKQSNVNDAGVCPET 730
++ D+ Y HT+TE+ FH + K ++V AG CP +
Sbjct: 252 EAGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRS 290
>AE014297-3281|AAO41593.1| 599|Drosophila melanogaster CG4620-PA,
isoform A protein.
Length = 599
Score = 31.9 bits (69), Expect = 0.99
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +2
Query: 617 KSADSNNYIHTKTER-FHKTKTQDNKQSNVNDAGVCPET 730
++ D+ Y HT+TE+ FH + K ++V AG CP +
Sbjct: 252 EAGDNCQYCHTRTEQQFHPEIYKSTKCNDVQQAGYCPRS 290
>AY049773-1|AAL12209.1| 1483|Drosophila melanogaster defective
transmitter-recyclingprotein protein.
Length = 1483
Score = 31.1 bits (67), Expect = 1.7
Identities = 34/136 (25%), Positives = 57/136 (41%)
Frame = +2
Query: 287 MMLLKSATSTVRK*KMAKFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRS 466
+ML ++ TS V K + A+ L S+ K + ++ K E+RK ++ S
Sbjct: 863 VMLGRNPTSGVEKIRAAQELLKTKNLSDLYKDTAESLNSQVAKEI-----EKRKRRVAAS 917
Query: 467 GRLKQANRKRHSLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRRKSADSNNYIH 646
R ++ +L+L E+ I K S + LI+D + +NY
Sbjct: 918 ATRCFNQRDKYDDTLELV-ENRLMIVKKDSGDLEELPPPPPLISDTESEDDNPTEDNYTP 976
Query: 647 TKTERFHKTKTQDNKQ 694
H TKTQD+K+
Sbjct: 977 GNEVHRHGTKTQDSKE 992
>AE014134-3393|AAN11119.2| 1483|Drosophila melanogaster CG31623-PA
protein.
Length = 1483
Score = 31.1 bits (67), Expect = 1.7
Identities = 34/136 (25%), Positives = 57/136 (41%)
Frame = +2
Query: 287 MMLLKSATSTVRK*KMAKFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRS 466
+ML ++ TS V K + A+ L S+ K + ++ K E+RK ++ S
Sbjct: 863 VMLGRNPTSGVEKIRAAQELLKTKNLSDLYKDTAESLNSQVAKEI-----EKRKRRVAAS 917
Query: 467 GRLKQANRKRHSLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRRKSADSNNYIH 646
R ++ +L+L E+ I K S + LI+D + +NY
Sbjct: 918 ATRCFNQRDKYDDTLELV-ENRLMIVKKDSGDLEELPPPPPLISDTESEDDNPTEDNYTP 976
Query: 647 TKTERFHKTKTQDNKQ 694
H TKTQD+K+
Sbjct: 977 GNEVHRHGTKTQDSKE 992
>AY058523-1|AAL13752.1| 816|Drosophila melanogaster LD23056p
protein.
Length = 816
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 416 TDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLY 520
T P DER K+ I R+ R Q KRH + ++Y
Sbjct: 710 TSSPDYDERFKVDIQRTNRQFQRIFKRHGVKFEIY 744
>AE014134-2030|AAF53069.1| 816|Drosophila melanogaster CG4713-PA
protein.
Length = 816
Score = 30.3 bits (65), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 416 TDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLY 520
T P DER K+ I R+ R Q KRH + ++Y
Sbjct: 710 TSSPDYDERFKVDIQRTNRQFQRIFKRHGVKFEIY 744
>BT009935-1|AAQ22404.1| 880|Drosophila melanogaster SD08724p
protein.
Length = 880
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 416 TDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESN 532
TDF ++ L+ R GR+K R+ S ++++ GESN
Sbjct: 578 TDFDRVERASILTDMRQGRVKAPKRRPPSAAINVLGESN 616
>AF145614-1|AAD38589.1| 537|Drosophila melanogaster BcDNA.GH03163
protein.
Length = 537
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 416 TDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESN 532
TDF ++ L+ R GR+K R+ S ++++ GESN
Sbjct: 235 TDFDRVERASILTDMRQGRVKAPKRRPPSAAINVLGESN 273
>AE014297-4668|AAF57089.1| 537|Drosophila melanogaster CG31012-PB,
isoform B protein.
Length = 537
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 416 TDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESN 532
TDF ++ L+ R GR+K R+ S ++++ GESN
Sbjct: 235 TDFDRVERASILTDMRQGRVKAPKRRPPSAAINVLGESN 273
>AE014297-4667|AAF57088.1| 545|Drosophila melanogaster CG31012-PA,
isoform A protein.
Length = 545
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 416 TDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESN 532
TDF ++ L+ R GR+K R+ S ++++ GESN
Sbjct: 235 TDFDRVERASILTDMRQGRVKAPKRRPPSAAINVLGESN 273
>AE014297-4666|AAN14260.2| 635|Drosophila melanogaster CG31012-PD,
isoform D protein.
Length = 635
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 416 TDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESN 532
TDF ++ L+ R GR+K R+ S ++++ GESN
Sbjct: 333 TDFDRVERASILTDMRQGRVKAPKRRPPSAAINVLGESN 371
>AE014297-4665|AAF57087.2| 882|Drosophila melanogaster CG31012-PC,
isoform C protein.
Length = 882
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 416 TDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESN 532
TDF ++ L+ R GR+K R+ S ++++ GESN
Sbjct: 580 TDFDRVERASILTDMRQGRVKAPKRRPPSAAINVLGESN 618
>AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p protein.
Length = 1689
Score = 29.1 bits (62), Expect = 7.0
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
+ +R K G E+ K LDER+K +LKQA + L + + E
Sbjct: 1161 NSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLTE 1220
Query: 545 KPKS-REYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQ-DNKQS 697
+S +E + + + +N K +S++ I + + +++ Q +NK S
Sbjct: 1221 IQQSLQELQDSVKQKEELV-QNLEEKVRESSSIIEAQNTKLNESNVQLENKTS 1272
>AJ010073-1|CAB45234.1| 614|Drosophila melanogaster XRCC1 protein
protein.
Length = 614
Score = 29.1 bits (62), Expect = 7.0
Identities = 23/91 (25%), Positives = 36/91 (39%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
S K+K S+H + K D PP E S +S ++ + R + + +
Sbjct: 310 SRKKKSSRHSLDKSISKEDKPPAKEHNSSSREKSTAKEEKEQLRKEER--SHSKEEKSRR 367
Query: 545 KPKSREYHVQIASSDLITDKNQRRKSADSNN 637
K KS+ H SSD K R +A +
Sbjct: 368 KEKSKHDH---RSSDTSNSKESSRPTAQKRH 395
>AF132142-1|AAD33589.1| 614|Drosophila melanogaster DNA repair
protein XRCC1 protein.
Length = 614
Score = 29.1 bits (62), Expect = 7.0
Identities = 23/91 (25%), Positives = 36/91 (39%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
S K+K S+H + K D PP E S +S ++ + R + + +
Sbjct: 310 SRKKKSSRHSLDKSISKEDKPPAKEHNSSSREKSTAKEEKEQLRKEER--SHSKEEKSRR 367
Query: 545 KPKSREYHVQIASSDLITDKNQRRKSADSNN 637
K KS+ H SSD K R +A +
Sbjct: 368 KEKSKHDH---RSSDTSNSKESSRPTAQKRH 395
>AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule
binding protein D-CLIP-190 protein.
Length = 1690
Score = 29.1 bits (62), Expect = 7.0
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
+ +R K G E+ K LDER+K +LKQA + L + + E
Sbjct: 1162 NSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLTE 1221
Query: 545 KPKS-REYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQ-DNKQS 697
+S +E + + + +N K +S++ I + + +++ Q +NK S
Sbjct: 1222 IQQSLQELQDSVKQKEELV-QNLEEKVRESSSIIEAQNTKLNESNVQLENKTS 1273
>AE014298-727|AAF46025.1| 614|Drosophila melanogaster CG4208-PA
protein.
Length = 614
Score = 29.1 bits (62), Expect = 7.0
Identities = 23/91 (25%), Positives = 36/91 (39%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
S K+K S+H + K D PP E S +S ++ + R + + +
Sbjct: 310 SRKKKSSRHSLDKSISKEDKPPAKEHNSSSREKSTAKEEKEQLRKEER--SHSKEEKSRR 367
Query: 545 KPKSREYHVQIASSDLITDKNQRRKSADSNN 637
K KS+ H SSD K R +A +
Sbjct: 368 KEKSKHDH---RSSDTSNSKESSRPTAQKRH 395
>AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC,
isoform C protein.
Length = 1652
Score = 29.1 bits (62), Expect = 7.0
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
+ +R K G E+ K LDER+K +LKQA + L + + E
Sbjct: 1124 NSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLTE 1183
Query: 545 KPKS-REYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQ-DNKQS 697
+S +E + + + +N K +S++ I + + +++ Q +NK S
Sbjct: 1184 IQQSLQELQDSVKQKEELV-QNLEEKVRESSSIIEAQNTKLNESNVQLENKTS 1235
>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
isoform D protein.
Length = 1677
Score = 29.1 bits (62), Expect = 7.0
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
+ +R K G E+ K LDER+K +LKQA + L + + E
Sbjct: 1149 NSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLTE 1208
Query: 545 KPKS-REYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQ-DNKQS 697
+S +E + + + +N K +S++ I + + +++ Q +NK S
Sbjct: 1209 IQQSLQELQDSVKQKEELV-QNLEEKVRESSSIIEAQNTKLNESNVQLENKTS 1260
>AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB,
isoform B protein.
Length = 1689
Score = 29.1 bits (62), Expect = 7.0
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
+ +R K G E+ K LDER+K +LKQA + L + + E
Sbjct: 1161 NSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLTE 1220
Query: 545 KPKS-REYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQ-DNKQS 697
+S +E + + + +N K +S++ I + + +++ Q +NK S
Sbjct: 1221 IQQSLQELQDSVKQKEELV-QNLEEKVRESSSIIEAQNTKLNESNVQLENKTS 1272
>AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA,
isoform A protein.
Length = 1690
Score = 29.1 bits (62), Expect = 7.0
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
+ +R K G E+ K LDER+K +LKQA + L + + E
Sbjct: 1162 NSERLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLTE 1221
Query: 545 KPKS-REYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQ-DNKQS 697
+S +E + + + +N K +S++ I + + +++ Q +NK S
Sbjct: 1222 IQQSLQELQDSVKQKEELV-QNLEEKVRESSSIIEAQNTKLNESNVQLENKTS 1273
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 28.7 bits (61), Expect = 9.2
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +2
Query: 362 PSEKRKHSKHDGETEDGKTDFPPL---DERRKLSISRSGRLKQANRKRHSLSLDLYGES 529
P KRK ++D + G P D + +S R + +RK+H D YG S
Sbjct: 1670 PPLKRKRDENDADASSGLAGAPGGGIGDNLKSMSFKRLNMDRHEDRKKHHRGPDYYGGS 1728
>BT023501-1|AAY84901.1| 919|Drosophila melanogaster LD27033p
protein.
Length = 919
Score = 28.7 bits (61), Expect = 9.2
Identities = 25/92 (27%), Positives = 46/92 (50%)
Frame = +2
Query: 386 KHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEKPKSREY 565
K G+ EDG D DE+ K S+ +SG+ K + + S S +S+ ++ SR+
Sbjct: 387 KVKGDGEDGDGD--KSDEKAKSSVEKSGKKKDKDDAKDSKS----KKSSSTKKERTSRKD 440
Query: 566 HVQIASSDLITDKNQRRKSADSNNYIHTKTER 661
+ +S D D+++ R+S+ + H +R
Sbjct: 441 KDKESSGD---DRSKERRSSRHRDEDHNNRKR 469
>AE014296-3476|AAF51681.1| 309|Drosophila melanogaster CG12977-PA
protein.
Length = 309
Score = 28.7 bits (61), Expect = 9.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 521 GESNQCIEKPKSREYHVQIASSDLITDKNQRRKS 622
G +C K+R H +I DLI K +RKS
Sbjct: 135 GNLKRCATSGKNRSSHNRIIECDLIPSKKSKRKS 168
>AE014296-1769|AAN11939.1| 919|Drosophila melanogaster CG8108-PB,
isoform B protein.
Length = 919
Score = 28.7 bits (61), Expect = 9.2
Identities = 25/92 (27%), Positives = 46/92 (50%)
Frame = +2
Query: 386 KHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEKPKSREY 565
K G+ EDG D DE+ K S+ +SG+ K + + S S +S+ ++ SR+
Sbjct: 387 KVKGDGEDGDGD--KSDEKAKSSVEKSGKKKDKDDAKDSKS----KKSSSTKKERTSRKD 440
Query: 566 HVQIASSDLITDKNQRRKSADSNNYIHTKTER 661
+ +S D D+++ R+S+ + H +R
Sbjct: 441 KDKESSGD---DRSKERRSSRHRDEDHNNRKR 469
>AE014296-1768|AAF50193.1| 919|Drosophila melanogaster CG8108-PA,
isoform A protein.
Length = 919
Score = 28.7 bits (61), Expect = 9.2
Identities = 25/92 (27%), Positives = 46/92 (50%)
Frame = +2
Query: 386 KHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEKPKSREY 565
K G+ EDG D DE+ K S+ +SG+ K + + S S +S+ ++ SR+
Sbjct: 387 KVKGDGEDGDGD--KSDEKAKSSVEKSGKKKDKDDAKDSKS----KKSSSTKKERTSRKD 440
Query: 566 HVQIASSDLITDKNQRRKSADSNNYIHTKTER 661
+ +S D D+++ R+S+ + H +R
Sbjct: 441 KDKESSGD---DRSKERRSSRHRDEDHNNRKR 469
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 28.7 bits (61), Expect = 9.2
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +2
Query: 362 PSEKRKHSKHDGETEDGKTDFPPL---DERRKLSISRSGRLKQANRKRHSLSLDLYGES 529
P KRK ++D + G P D + +S R + +RK+H D YG S
Sbjct: 1670 PPLKRKRDENDADASSGLAGAPGGGIGDNLKSMSFKRLNMDRHEDRKKHHRGPDYYGGS 1728
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,385,463
Number of Sequences: 53049
Number of extensions: 548609
Number of successful extensions: 1720
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1717
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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