Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18m06f
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 35 0.073
Z70680-2|CAA94573.1| 424|Caenorhabditis elegans Hypothetical pr... 33 0.22
U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical pr... 33 0.29
U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical pr... 33 0.29
U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 31 0.68
AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical... 31 0.68
U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical pr... 30 1.6
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 30 1.6
Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CT... 30 2.1
Z81089-4|CAB03138.3| 425|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF039719-11|AAB96750.1| 191|Caenorhabditis elegans Hypothetical... 29 3.6
Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical pr... 29 4.8
AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical ... 29 4.8
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 29 4.8
AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical... 28 6.3
AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical ... 28 6.3
AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical ... 28 6.3
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 28 6.3
AL023816-4|CAA19433.2| 344|Caenorhabditis elegans Hypothetical ... 28 8.4
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 34.7 bits (76), Expect = 0.073
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 362 PSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHS 502
PSE R+ K + E ++ P D R + + SRSGR ++R RHS
Sbjct: 139 PSENREKEKQSRDKERRRSR-SPRDRRGRATTSRSGRTSSSDRDRHS 184
>Z70680-2|CAA94573.1| 424|Caenorhabditis elegans Hypothetical
protein C25G4.4 protein.
Length = 424
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/110 (20%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Frame = +2
Query: 434 DERRKLSISRSGRLKQANRKRH--SLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKN 607
D+ R+ S R+ +++ + H ++++D Y N+C K +SR Y V S +++ +
Sbjct: 122 DKERQKDWKASIRVGRSSLRTHMEAMTIDFYEHMNRCSGKCQSRNY-VNAPSEEVLQARK 180
Query: 608 QRRKSADSNNYIHTKTERFHKTKTQDNKQSNVNDAGVCPETEIDSAFEII 757
+R S + E K D+ + + A P ++ +++
Sbjct: 181 SKRTSEAGQLKYEIENEMAGKEADNDDNRKSAKKARGRPRGSVNKPRQMV 230
>U40801-5|AAO91727.1| 777|Caenorhabditis elegans Hypothetical
protein F28E10.1b protein.
Length = 777
Score = 32.7 bits (71), Expect = 0.29
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Frame = +2
Query: 338 KFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDL 517
KF+ + TP RK+ E +D KT P + +++ G++++ N L L
Sbjct: 462 KFILTTTTPLAIRKYQTFVVEPKDEKTALPQSASADAVMLAKKGKVQRKNVTSSIQQLSL 521
Query: 518 YGESNQCIEKPKSRE-YHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQ--DN 688
KP S E H+ + T + RK + + T+R + +
Sbjct: 522 DEPITSPSRKPVSPEPRHLFVMGGRRSTTPQEDRKVPEPPRNLKLDTDRSQSDHAELLEE 581
Query: 689 KQSNVNDAGVCPETEI 736
++S ++ PE EI
Sbjct: 582 RKSTMSGDLTSPEEEI 597
>U40801-4|AAO91728.1| 873|Caenorhabditis elegans Hypothetical
protein F28E10.1c protein.
Length = 873
Score = 32.7 bits (71), Expect = 0.29
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Frame = +2
Query: 338 KFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDL 517
KF+ + TP RK+ E +D KT P + +++ G++++ N L L
Sbjct: 558 KFILTTTTPLAIRKYQTFVVEPKDEKTALPQSASADAVMLAKKGKVQRKNVTSSIQQLSL 617
Query: 518 YGESNQCIEKPKSRE-YHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQ--DN 688
KP S E H+ + T + RK + + T+R + +
Sbjct: 618 DEPITSPSRKPVSPEPRHLFVMGGRRSTTPQEDRKVPEPPRNLKLDTDRSQSDHAELLEE 677
Query: 689 KQSNVNDAGVCPETEI 736
++S ++ PE EI
Sbjct: 678 RKSTMSGDLTSPEEEI 693
>U40801-3|AAV34792.1| 1134|Caenorhabditis elegans Hypothetical protein
F28E10.1a protein.
Length = 1134
Score = 32.7 bits (71), Expect = 0.29
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Frame = +2
Query: 338 KFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDL 517
KF+ + TP RK+ E +D KT P + +++ G++++ N L L
Sbjct: 604 KFILTTTTPLAIRKYQTFVVEPKDEKTALPQSASADAVMLAKKGKVQRKNVTSSIQQLSL 663
Query: 518 YGESNQCIEKPKSRE-YHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQ--DN 688
KP S E H+ + T + RK + + T+R + +
Sbjct: 664 DEPITSPSRKPVSPEPRHLFVMGGRRSTTPQEDRKVPEPPRNLKLDTDRSQSDHAELLEE 723
Query: 689 KQSNVNDAGVCPETEI 736
++S ++ PE EI
Sbjct: 724 RKSTMSGDLTSPEEEI 739
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 31.5 bits (68), Expect = 0.68
Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 9/144 (6%)
Frame = +2
Query: 347 KSFFTPSEKRKHSKHDGET---EDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDL 517
K+F EK+K ++ E ED K + P +RR R +RH
Sbjct: 857 KNFADKKEKKKGKWNEDEEDIFEDRKEELPKESDRRDRKDRRHDDEDDRKERRHERDSQK 916
Query: 518 YGESNQCIEKPKSRE---YHVQIASSDLITDKNQRRKSADSNNYIHTKTER---FHKTKT 679
E ++ E+ + RE Y + K + +K D +Y + R + K K+
Sbjct: 917 IDEQDRKKERKRDRETEAYDSDKLQAPKTKVKREDKKRDDRKDYERDRERRKDDYEKEKS 976
Query: 680 QDNKQSNVNDAGVCPETEIDSAFE 751
+ + N+ E E++ E
Sbjct: 977 KRKESDRDNEKEKQREKEVEKEHE 1000
>AC025716-12|AAK39604.1| 704|Caenorhabditis elegans Hypothetical
protein Y39G10AR.15 protein.
Length = 704
Score = 31.5 bits (68), Expect = 0.68
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 377 KHSKHDGETEDGKTDFPPLDERRKLSISRSGR--LKQANRKRHSLSLDLYGESNQCIEKP 550
K SK + + +D K+ P +E RK++ + S + L +RKR L+ G+S + EK
Sbjct: 513 KRSKPNVKEKDQKS---PFEEPRKVAFNVSDKCTLHVYSRKRRPLTNP--GKSERFTEKK 567
Query: 551 KSREYHVQIASSDLITDKNQRRKSADSNNY 640
+R++H++++S + + + NY
Sbjct: 568 YTRDFHLKMSSMAFDGEAPETDDEIEEENY 597
>U23454-2|AAC46519.2| 368|Caenorhabditis elegans Hypothetical
protein C10A4.5 protein.
Length = 368
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 518 YGESNQCIEK-PKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQ 694
Y E+ IE+ P I S D I +N R + + NN +T + ++ K DN++
Sbjct: 225 YTEAIAMIEQAPVQESNEASIESRDPIHSRNNRSSNTNENNDGNTNDQTDYENKETDNER 284
Query: 695 S 697
S
Sbjct: 285 S 285
>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical protein
F54F2.1 protein.
Length = 1226
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 335 AKFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSG 469
+K +K TP +K+K +H GE K F L E KLS G
Sbjct: 1010 SKRVKRNPTPKKKKKGGEHRGEPRSDKARFSDLREAVKLSKEAGG 1054
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/120 (20%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Frame = +2
Query: 350 SFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLS--ISRSGRLKQANRKRHSLSLDLYG 523
S F + +K+ + +D D ++ RRK S +S + K++ +++ +++ D
Sbjct: 227 SDFDKKKWKKNKAKRSKRDDSSDDDSEMERRRKKSKKSKKSKKFKKSEKRKRAVN-DSSS 285
Query: 524 ESNQCIEKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNV 703
+ EKP+ R + A D ++ + KS+ + +K E + + D+++ V
Sbjct: 286 DDEDEEEKPEKRSKKSKKAVIDSSSEDEEEEKSSKKRSK-KSKKESDEEQQASDSEEEVV 344
>Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical
protein C17H1.5 protein.
Length = 351
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQAN-RKRHSLSLDLYGESNQCI 541
S ++ KH ETE +T + E+ + + R L++AN K+ + +LD++ E+ + +
Sbjct: 78 SVEQLKEKHKNETEKLETQIKEIKEKGEEDV-RKVELQRANLEKQRTEALDIHLETMKEL 136
Query: 542 EKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTE 658
+ K E Q +++ + K+ + N I +T+
Sbjct: 137 NEKKFEEIRQQRKEQNIL--NVEEMKALSTRNAIEHETQ 173
>Z81094-5|CAB03149.2| 675|Caenorhabditis elegans Hypothetical
protein F58G11.5 protein.
Length = 675
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/76 (23%), Positives = 31/76 (40%)
Frame = +2
Query: 329 KMAKFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLS 508
K+ K + +++ E ++ + D E + PP D +R S SRS ++ R + S
Sbjct: 492 KIRKCVDAYYASQEPPENLREDSEARRSNSRSPPRDHKRSRSPSRSPSPRRRQRSSSNSS 551
Query: 509 LDLYGESNQCIEKPKS 556
S KS
Sbjct: 552 RSSGSSSRSSSSSRKS 567
>AF536544-1|AAN77185.1| 675|Caenorhabditis elegans SR-related CTD
associated factor 6 protein.
Length = 675
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/76 (23%), Positives = 31/76 (40%)
Frame = +2
Query: 329 KMAKFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLS 508
K+ K + +++ E ++ + D E + PP D +R S SRS ++ R + S
Sbjct: 492 KIRKCVDAYYASQEPPENLREDSEARRSNSRSPPRDHKRSRSPSRSPSPRRRQRSSSNSS 551
Query: 509 LDLYGESNQCIEKPKS 556
S KS
Sbjct: 552 RSSGSSSRSSSSSRKS 567
>Z81089-4|CAB03138.3| 425|Caenorhabditis elegans Hypothetical
protein F53H4.5 protein.
Length = 425
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 506 SLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRRKSA 625
SLD + NQC K +SR Y I D +D + RR+S+
Sbjct: 61 SLDFHDHPNQCSAKCQSRNY---ITPKDPTSDPSGRRRSS 97
>Z49908-6|CAA90100.3| 327|Caenorhabditis elegans Hypothetical
protein C07E3.6 protein.
Length = 327
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 371 KRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEKP 550
K SK+ G+T +GK PP+ +R GR+ + ++ + L + N C + P
Sbjct: 222 KSSPSKNAGQTPNGKRQVPPM--LTVNGKTRRGRIVYSTQELNILEKYYEEDPNACAD-P 278
Query: 551 KSREYHVQIASSDL----ITDKNQRRK 619
+ RE + S D + +N+RRK
Sbjct: 279 RKRETMCKTLSIDYHRLKVWFQNRRRK 305
>AF039719-11|AAB96750.1| 191|Caenorhabditis elegans Hypothetical
protein K04F10.1 protein.
Length = 191
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 217 GFCCCMTRLSQPNYETRCDLN*INDASKVCNEYREKIKNGKISQIVLYAERKAE 378
G+C C R S NY C++ ++D V +KI + + ++ AER E
Sbjct: 94 GWCSCNPRKSGENYGLDCEILQVDDVCIVLTRNEDKITDCAVD--IVTAERDLE 145
>Z70718-5|CAA94670.1| 197|Caenorhabditis elegans Hypothetical
protein C04G2.8 protein.
Length = 197
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 371 KRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSL 511
K K K+ D K F PL + ++ +SRS R + A+R R S S+
Sbjct: 3 KSKSQKNKLRPRDSKGRFTPLAKTKRTVVSRS-RSRSASRARRSRSV 48
>AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical
protein Y18H1A.2 protein.
Length = 270
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 368 EKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEK 547
+K+KH D E + + R+KL+ R RLK+ ++ L+ E + ++K
Sbjct: 183 KKKKHRHRDSSEERQLEEEYDRERRQKLASMRDERLKRERVEKARAHALLHPEEIELLQK 242
Query: 548 PKSRE 562
K+ E
Sbjct: 243 RKAAE 247
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Frame = +2
Query: 437 ERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRR 616
E+RK + R +KQ N++R + + + NQ EK K E I +NQ R
Sbjct: 213 EKRKEILRREEEIKQQNQEREKQINEDFEKRNQ--EKLKREEE---------IKQQNQER 261
Query: 617 KSADSNNYIHTKTERFHKTKT-QDNKQSNVNDAGVCPETE 733
+ ++++ K E+ + K + NKQ+ + E+E
Sbjct: 262 EKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESE 301
>AL033514-31|CAA22092.1| 444|Caenorhabditis elegans Hypothetical
protein Y75B8A.32 protein.
Length = 444
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 320 RK*KMAKFLKSFFTPSEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLK 478
+K +M K + TP EK KH K T D L +++KL +++ L+
Sbjct: 242 KKPRMTKIERMSMTPEEKTKHIKKQNRTNTATYD---LKQKKKLEDAQNKNLE 291
>AF067217-5|AAO38635.1| 856|Caenorhabditis elegans Hypothetical
protein F56A6.1b protein.
Length = 856
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 91 SEHNAQKTADKNVYNSIERRLNHLKHNAP 5
+EH+ KT +NVYN +R + LK P
Sbjct: 89 TEHDNDKTRCQNVYNEAIKRYDELKTGGP 117
>AF067217-4|AAF99978.1| 887|Caenorhabditis elegans Hypothetical
protein F56A6.1a protein.
Length = 887
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 91 SEHNAQKTADKNVYNSIERRLNHLKHNAP 5
+EH+ KT +NVYN +R + LK P
Sbjct: 89 TEHDNDKTRCQNVYNEAIKRYDELKTGGP 117
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/94 (24%), Positives = 41/94 (43%)
Frame = +2
Query: 479 QANRKRHSLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTE 658
++ R R + +DL E+ E+ EY S++L+ + S + + +
Sbjct: 250 KSGRHRANNKIDL--ENYDSYEEDFDEEYE---QSNELVPQRPSENSVDLSTFVVENREK 304
Query: 659 RFHKTKTQDNKQSNVNDAGVCPETEIDSAFEIID 760
+ K+K DN+ S + PETE + F I D
Sbjct: 305 QSRKSKRNDNEMSYEIVESLKPETEYCNLFNIQD 338
>AL023816-4|CAA19433.2| 344|Caenorhabditis elegans Hypothetical
protein T05G11.6 protein.
Length = 344
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = -2
Query: 378 FRFSLGVKNDLRNFAIFYFLTVL-VADFRSIIYLVKITS 265
F F++ + LR F I++F+T++ + DF ++LV +T+
Sbjct: 35 FHFAVLTRPALRTFTIYFFMTIIAICDFFR-LFLVIVTA 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,704,139
Number of Sequences: 27780
Number of extensions: 307721
Number of successful extensions: 1045
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1045
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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