Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18m06f
(766 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 29 0.063
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.4
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 3.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 4.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.1
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 5.4
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 5.4
AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein. 22 5.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 7.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 22 7.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 7.2
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 28.7 bits (61), Expect = 0.063
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +2
Query: 446 KLSISRSGRLKQANRKRHSLSLDLYGESNQCIEKPKSREYHV--QIASS---DLITDKNQ 610
K ++ +SGR+ R + L+L + NQ + HV QI + DLI +
Sbjct: 358 KQNVPQSGRVNNTQRNEYLLALS---DRNQNVLNNDLNLEHVNFQILGANVNDLIRNSRC 414
Query: 611 RR-KSADSNNYIHTKTERFHKTKTQDNKQSNVND 709
+ D+N+Y H + H +K+ + + ND
Sbjct: 415 ANFDNQDNNHYNHNHNQARHSSKSDNQNNNQHND 448
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 2.4
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
+E +K++ F R S S + RK+ L+ E + +E
Sbjct: 205 NESKKYATSSNSLRSRTHGFQHTSSRYSRERSCSRDRNREYRKKDRRYEKLHNEKEKLLE 264
Query: 545 KPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFH-KTKTQDNKQSNV 703
+ SRE + + + + KN+R + Y T ER +T+ + +K+ +
Sbjct: 265 ERTSRERYSRSREREQKSYKNER----EYRKYGETSKERSRDRTERERSKEPKI 314
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 583 RSDLHVILSRLRFLDALVTF 524
+S +H++L L D LVTF
Sbjct: 70 KSRIHIMLMHLAIADLLVTF 89
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +2
Query: 488 RKRHSLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFH 667
RK+ LY E + +E+ SR+ + + + + KN+R + Y T ER
Sbjct: 13 RKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNER----EYREYRETSRERSR 68
Query: 668 KTKTQDNKQ 694
K ++ +
Sbjct: 69 DRKERERSK 77
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +2
Query: 488 RKRHSLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFH 667
RK+ LY E + +E+ SR+ + + + + KN+R + Y T ER
Sbjct: 13 RKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNER----EYREYRETSRERSR 68
Query: 668 KTKTQDNKQ 694
K ++ +
Sbjct: 69 DRKERERSK 77
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +2
Query: 488 RKRHSLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFH 667
RK+ LY E + +E+ SR+ + + + + KN+R + Y T ER
Sbjct: 13 RKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNER----EYREYRETSRERSR 68
Query: 668 KTKTQDNKQ 694
K ++ +
Sbjct: 69 DRKERERSK 77
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +2
Query: 488 RKRHSLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFH 667
RK+ LY E + +E+ SR+ + + + + KN+R + Y T ER
Sbjct: 13 RKKDRQYEKLYNEKEKFLEEKTSRKRYSRSREREQKSYKNER----EYREYRETSRERSR 68
Query: 668 KTKTQDNKQ 694
K ++ +
Sbjct: 69 DRKERERSK 77
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 4.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 372 FSLGVKNDLRNFAIFYFLTVLVADFRSIIYLVKITSCLII 253
++ V+N N + Y LTV V ++Y+ TS I+
Sbjct: 1382 YTCQVENAQGNDKLHYTLTVQVPPSAPVLYVTSSTSSSIL 1421
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 4.1
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 372 FSLGVKNDLRNFAIFYFLTVLVADFRSIIYLVKITSCLII 253
++ V+N N + Y LTV V ++Y+ TS I+
Sbjct: 1378 YTCQVENAQGNDKLHYTLTVQVPPSAPVLYVTSSTSSSIL 1417
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 312 LVADFRSIIYLVKITSCLIIW 250
LV +F I LVKI+ IW
Sbjct: 295 LVINFSGIFNLVKISPLFTIW 315
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 5.4
Identities = 6/36 (16%), Positives = 21/36 (58%)
Frame = +2
Query: 602 KNQRRKSADSNNYIHTKTERFHKTKTQDNKQSNVND 709
++ ++ + +N++ + TE+ ++ + + + VND
Sbjct: 55 QDHNKEKSKNNHHCNQDTEKLNQLEIESDNSKEVND 90
>AB178034-1|BAD27112.1| 76|Apis mellifera apiceropsin protein.
Length = 76
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 312 LVADFRSIIYLVKITSCLIIW 250
LV +F I LVKI+ IW
Sbjct: 45 LVINFSGIFNLVKISPLFTIW 65
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 7.2
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +2
Query: 443 RKLSISRSGRLKQANRKRHSLSLDLYGESNQCIEKPKSREYHVQIASSDLITDKNQRR 616
R S R+ K+ +R+ L Y E + +E+ SR+ + + + + KN+R+
Sbjct: 2 RSCSKDRNREYKEKDRRYEKL----YNEKEKLLEERTSRKRYSRSREREQKSYKNERK 55
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.2
Identities = 18/109 (16%), Positives = 41/109 (37%)
Frame = +2
Query: 365 SEKRKHSKHDGETEDGKTDFPPLDERRKLSISRSGRLKQANRKRHSLSLDLYGESNQCIE 544
+E +K++ + F R S S + RK+ L+ E + +E
Sbjct: 194 NESKKYATSSNSLRNRTHGFQHTSSRYSRERSCSRDRNREYRKKDRQYEKLHNEKEKLLE 253
Query: 545 KPKSREYHVQIASSDLITDKNQRRKSADSNNYIHTKTERFHKTKTQDNK 691
+ SR+ + + + + KN+R +R + ++++ K
Sbjct: 254 ERTSRKRYSRSREREQKSYKNEREYRKYGKTSKERSRDRMERERSKEPK 302
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 7.2
Identities = 10/37 (27%), Positives = 16/37 (43%)
Frame = +2
Query: 641 IHTKTERFHKTKTQDNKQSNVNDAGVCPETEIDSAFE 751
IH H + QD Q++V PE ++ F+
Sbjct: 375 IHAGNYTCHAVRNQDVVQTHVLTIHTIPEVKVTPRFQ 411
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,754
Number of Sequences: 438
Number of extensions: 3795
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -