Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18l11r
(461 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 56 4e-08
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 56 4e-08
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 56 4e-08
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 56 4e-08
AB014520-1|BAA31595.1| 1985|Homo sapiens KIAA0620 protein protein. 34 0.21
Z93242-1|CAI42724.1| 1630|Homo sapiens Nance-Horan syndrome (con... 32 1.1
AY456993-1|AAS13456.1| 1473|Homo sapiens Nance-Horan syndrome pr... 32 1.1
AY456992-1|AAS13455.1| 1474|Homo sapiens Nance-Horan syndrome pr... 32 1.1
AY436752-1|AAR03104.1| 1630|Homo sapiens Nance-Horan syndrome pr... 32 1.1
AL845433-1|CAI41241.1| 1630|Homo sapiens Nance-Horan syndrome (c... 32 1.1
AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive dom... 31 1.9
AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive dom... 31 1.9
AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive dom... 31 1.9
AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive dom... 31 1.9
AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive dom... 31 1.9
AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens ... 31 1.9
AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens ... 31 1.9
AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens ... 31 1.9
AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remod... 31 1.9
AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein pr... 31 1.9
AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein... 31 1.9
AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor ... 31 1.9
AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling f... 31 1.9
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 31 1.9
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 31 1.9
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 31 1.9
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 31 1.9
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 31 1.9
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 31 2.5
M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 30 4.5
M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 30 4.5
BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transc... 30 4.5
BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transc... 30 4.5
BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein. 30 4.5
BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B associ... 30 4.5
BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein. 30 4.5
AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein... 30 4.5
AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transc... 30 4.5
AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated trans... 30 4.5
AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated trans... 30 4.5
AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein... 30 4.5
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 29 5.9
AK126510-1|BAC86575.1| 213|Homo sapiens protein ( Homo sapiens ... 29 5.9
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 29 5.9
AB044934-1|BAB13698.1| 390|Homo sapiens histamine H4 receptor p... 29 5.9
Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protei... 29 7.8
CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein. 29 7.8
BX511262-27|CAM45818.1| 356|Homo sapiens HLA-B associated trans... 29 7.8
BC032358-1|AAH32358.1| 418|Homo sapiens Enah/Vasp-like protein. 29 7.8
BC023997-1|AAH23997.1| 416|Homo sapiens EVL protein protein. 29 7.8
BC008783-1|AAH08783.1| 356|Homo sapiens HLA-B associated transc... 29 7.8
BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein. 29 7.8
BA000025-27|BAB63387.1| 356|Homo sapiens BAT4 protein. 29 7.8
AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding prot... 29 7.8
AL805934-29|CAI18515.1| 356|Homo sapiens HLA-B associated trans... 29 7.8
AL670886-20|CAI17792.1| 356|Homo sapiens HLA-B associated trans... 29 7.8
AL662899-4|CAI18385.1| 356|Homo sapiens HLA-B associated transc... 29 7.8
AF131766-1|AAD20040.1| 362|Homo sapiens Similar to Ena-VASP lik... 29 7.8
AF129756-13|AAD18082.1| 356|Homo sapiens BAT4 protein. 29 7.8
AF112209-1|AAF17197.1| 416|Homo sapiens Ena-VASP-like protein p... 29 7.8
AF087843-1|AAP97156.1| 418|Homo sapiens B6 protein. 29 7.8
AF052504-1|AAF21709.1| 418|Homo sapiens RNB6 protein. 29 7.8
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 56.4 bits (130), Expect = 4e-08
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = -3
Query: 270 LPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYDMSKQQTT 97
LP N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D SK ++
Sbjct: 507 LPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELDASKTVSS 566
Query: 96 P 94
P
Sbjct: 567 P 567
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 56.4 bits (130), Expect = 4e-08
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = -3
Query: 270 LPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYDMSKQQTT 97
LP N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D SK ++
Sbjct: 562 LPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELDASKTVSS 621
Query: 96 P 94
P
Sbjct: 622 P 622
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 56.4 bits (130), Expect = 4e-08
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = -3
Query: 270 LPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYDMSKQQTT 97
LP N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D SK ++
Sbjct: 562 LPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSELDASKTVSS 621
Query: 96 P 94
P
Sbjct: 622 P 622
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 56.4 bits (130), Expect = 4e-08
Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Frame = -3
Query: 270 LPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQYDMSKQQTT 97
LP N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ + D SK ++
Sbjct: 562 LPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSEVDASKTVSS 621
Query: 96 P 94
P
Sbjct: 622 P 622
>AB014520-1|BAA31595.1| 1985|Homo sapiens KIAA0620 protein protein.
Length = 1985
Score = 34.3 bits (75), Expect = 0.21
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = -1
Query: 209 SELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALG 30
S R A R+A PP + SRPRL+P T + P ++ PRA G
Sbjct: 8 SRARAPGPGAAGAGRKRLADPGPPPASRRLRAPGSRPRLAPCTRRAAQPAHARMAPRAAG 67
Query: 29 SA 24
A
Sbjct: 68 GA 69
>Z93242-1|CAI42724.1| 1630|Homo sapiens Nance-Horan syndrome
(congenital cataracts and dental anomalies) protein.
Length = 1630
Score = 31.9 bits (69), Expect = 1.1
Identities = 29/109 (26%), Positives = 46/109 (42%)
Frame = -1
Query: 353 KASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGYQSTSELRTESDEALD 174
K S + E L + + ++S ++ SP LP G + S T+
Sbjct: 1487 KKSNTSNEEFKLLLLKKGSRSDSSYRMSATEILKSPILPKPPGELTAESPQSTDDAHQGS 1546
Query: 173 VTSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALGS 27
+ ++ P PR+N +S+ S ATSA + GRS+A P A S
Sbjct: 1547 QGAEALSPLSPCSPRVNAEGFSSK---SFATSASARVGRSRAPPAASSS 1592
>AY456993-1|AAS13456.1| 1473|Homo sapiens Nance-Horan syndrome protein
isoform 2 protein.
Length = 1473
Score = 31.9 bits (69), Expect = 1.1
Identities = 29/109 (26%), Positives = 46/109 (42%)
Frame = -1
Query: 353 KASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGYQSTSELRTESDEALD 174
K S + E L + + ++S ++ SP LP G + S T+
Sbjct: 1330 KKSNTSNEEFKLLLLKKGSRSDSSYRMSATEILKSPILPKPPGELTAESPQSTDDAHQGS 1389
Query: 173 VTSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALGS 27
+ ++ P PR+N +S+ S ATSA + GRS+A P A S
Sbjct: 1390 QGAEALSPLSPCSPRVNAEGFSSK---SFATSASARVGRSRAPPAASSS 1435
>AY456992-1|AAS13455.1| 1474|Homo sapiens Nance-Horan syndrome protein
isoform 1 protein.
Length = 1474
Score = 31.9 bits (69), Expect = 1.1
Identities = 29/109 (26%), Positives = 46/109 (42%)
Frame = -1
Query: 353 KASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGYQSTSELRTESDEALD 174
K S + E L + + ++S ++ SP LP G + S T+
Sbjct: 1331 KKSNTSNEEFKLLLLKKGSRSDSSYRMSATEILKSPILPKPPGELTAESPQSTDDAHQGS 1390
Query: 173 VTSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALGS 27
+ ++ P PR+N +S+ S ATSA + GRS+A P A S
Sbjct: 1391 QGAEALSPLSPCSPRVNAEGFSSK---SFATSASARVGRSRAPPAASSS 1436
>AY436752-1|AAR03104.1| 1630|Homo sapiens Nance-Horan syndrome protein
protein.
Length = 1630
Score = 31.9 bits (69), Expect = 1.1
Identities = 29/109 (26%), Positives = 46/109 (42%)
Frame = -1
Query: 353 KASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGYQSTSELRTESDEALD 174
K S + E L + + ++S ++ SP LP G + S T+
Sbjct: 1487 KKSNTSNEEFKLLLLKKGSRSDSSYRMSATEILKSPILPKPPGELTAESPQSTDDAHQGS 1546
Query: 173 VTSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALGS 27
+ ++ P PR+N +S+ S ATSA + GRS+A P A S
Sbjct: 1547 QGAEALSPLSPCSPRVNAEGFSSK---SFATSASARVGRSRAPPAASSS 1592
>AL845433-1|CAI41241.1| 1630|Homo sapiens Nance-Horan syndrome
(congenital cataracts and dental anomalies) protein.
Length = 1630
Score = 31.9 bits (69), Expect = 1.1
Identities = 29/109 (26%), Positives = 46/109 (42%)
Frame = -1
Query: 353 KASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGYQSTSELRTESDEALD 174
K S + E L + + ++S ++ SP LP G + S T+
Sbjct: 1487 KKSNTSNEEFKLLLLKKGSRSDSSYRMSATEILKSPILPKPPGELTAESPQSTDDAHQGS 1546
Query: 173 VTSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALGS 27
+ ++ P PR+N +S+ S ATSA + GRS+A P A S
Sbjct: 1547 QGAEALSPLSPCSPRVNAEGFSSK---SFATSASARVGRSRAPPAASSS 1592
>AL512408-3|CAI23484.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1889
>AL512408-1|CAI23482.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1289
>AL034380-9|CAI21623.1| 2285|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 2285
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1889
>AL034380-6|CAI21621.1| 1685|Homo sapiens AT rich interactive domain
1A (SWI-like) protein.
Length = 1685
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1289
>AK223275-1|BAD96995.1| 1181|Homo sapiens AT rich interactive domain
1A (SWI- like) isoform a variant protein.
Length = 1181
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 741 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 785
>AK074940-1|BAC11306.1| 754|Homo sapiens protein ( Homo sapiens
cDNA FLJ90459 fis, clone NT2RP3001754. ).
Length = 754
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 314 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 358
>AK027655-1|BAB55270.1| 613|Homo sapiens protein ( Homo sapiens
cDNA FLJ14749 fis, clone NT2RP3002876, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 613
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 173 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 217
>AK027442-1|BAB55114.1| 527|Homo sapiens protein ( Homo sapiens
cDNA FLJ14536 fis, clone NT2RM2001105, weakly similar to
Drosophila melanogaster eyelid (eld) mRNA. ).
Length = 527
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 87 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 131
>AF521670-1|AAN03446.1| 1999|Homo sapiens SWI/SNF chromatin remodeling
complex subunit OSA1 protein.
Length = 1999
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1559 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1603
>AF268913-1|AAK54505.1| 1685|Homo sapiens OSA1 nuclear protein
protein.
Length = 1685
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1245 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1289
>AF265208-1|AAF75765.1| 1927|Homo sapiens SWI-SNF complex protein p270
protein.
Length = 1927
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1487 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1531
>AF231056-1|AAG33967.1| 2285|Homo sapiens BRG1-Associated Factor 250a
protein.
Length = 2285
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1845 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1889
>AF219114-1|AAG17549.2| 1939|Homo sapiens chromatin remodelling factor
p250 protein.
Length = 1939
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -1
Query: 233 RKGGYQSTSELRTESDEALDVTSSRVAKECPPLPRINMT*VNSRP 99
R GG +T ++T + ++ SR CPP PR ++T P
Sbjct: 1499 RIGGGDTTEHIQTHFESKTELLPSRPHAPCPPAPRKHVTTAEGTP 1543
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 31.1 bits (67), Expect = 1.9
Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = -1
Query: 305 RRRKRNASATANSRRTQTSPN----LPIRKG--GYQSTSELRTESDEALDVTSSRVAKEC 144
RRR R+ S+ + SRR Q S + R+G GY S S R ES R
Sbjct: 1786 RRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRT-SSRRRRGRSRT 1844
Query: 143 PPLPRINMT*VNSRPRLSPATSAKSXPGRSQADP 42
PP R SR R SPA +S RS+A P
Sbjct: 1845 PPTSR-----KRSRSRTSPAPWKRS---RSRASP 1870
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 31.1 bits (67), Expect = 1.9
Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = -1
Query: 305 RRRKRNASATANSRRTQTSPN----LPIRKG--GYQSTSELRTESDEALDVTSSRVAKEC 144
RRR R+ S+ + SRR Q S + R+G GY S S R ES R
Sbjct: 818 RRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRT-SSRRRRGRSRT 876
Query: 143 PPLPRINMT*VNSRPRLSPATSAKSXPGRSQADP 42
PP R SR R SPA +S RS+A P
Sbjct: 877 PPTSR-----KRSRSRTSPAPWKRS---RSRASP 902
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 31.1 bits (67), Expect = 1.9
Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = -1
Query: 305 RRRKRNASATANSRRTQTSPN----LPIRKG--GYQSTSELRTESDEALDVTSSRVAKEC 144
RRR R+ S+ + SRR Q S + R+G GY S S R ES R
Sbjct: 1786 RRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRT-SSRRRRGRSRT 1844
Query: 143 PPLPRINMT*VNSRPRLSPATSAKSXPGRSQADP 42
PP R SR R SPA +S RS+A P
Sbjct: 1845 PPTSR-----KRSRSRTSPAPWKRS---RSRASP 1870
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 31.1 bits (67), Expect = 1.9
Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = -1
Query: 305 RRRKRNASATANSRRTQTSPN----LPIRKG--GYQSTSELRTESDEALDVTSSRVAKEC 144
RRR R+ S+ + SRR Q S + R+G GY S S R ES R
Sbjct: 309 RRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRT-SSRRRRGRSRT 367
Query: 143 PPLPRINMT*VNSRPRLSPATSAKSXPGRSQADP 42
PP R SR R SPA +S RS+A P
Sbjct: 368 PPTSR-----KRSRSRTSPAPWKRS---RSRASP 393
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 31.1 bits (67), Expect = 1.9
Identities = 34/94 (36%), Positives = 41/94 (43%), Gaps = 6/94 (6%)
Frame = -1
Query: 305 RRRKRNASATANSRRTQTSPN----LPIRKG--GYQSTSELRTESDEALDVTSSRVAKEC 144
RRR R+ S+ + SRR Q S + R+G GY S S R ES R
Sbjct: 1834 RRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRT-SSRRRRGRSRT 1892
Query: 143 PPLPRINMT*VNSRPRLSPATSAKSXPGRSQADP 42
PP R SR R SPA +S RS+A P
Sbjct: 1893 PPTSR-----KRSRSRTSPAPWKRS---RSRASP 1918
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGLPPREGPSRRAEEPGSRG 2147
>M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) gene, 3' end. ).
Length = 2142
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2097 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 2132
>M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) mRNA, complete cds.
).
Length = 2142
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2097 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 2132
>BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 2147
>BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 2147
>BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein.
Length = 2157
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 2147
>BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B
associated transcript 2 protein.
Length = 696
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 651 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 686
>BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 2147
>AY509035-1|AAS91662.1| 1386|Homo sapiens roundabout-like protein 3
protein.
Length = 1386
Score = 29.9 bits (64), Expect = 4.5
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = -3
Query: 240 PDPERWLPKYERTAYRKRRGIRRDVIKGSQGMSTTATDQYDMSKQQTTPIPGDLCQEXPG 61
PD E WLP Y R ++ R QG ST +T + S+ ++ PG
Sbjct: 1318 PDEEAWLP-YSRPSFLSR----------GQGTSTCSTAGSNSSRGSSS----SRGSRGPG 1362
Query: 60 SKSSRSESAWQRKQPAEEER 1
SRS+S Q ++P ++ R
Sbjct: 1363 RSRSRSQSRSQSQRPGQKRR 1382
>AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 2147
>AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 2147
>AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 2112 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 2147
>AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein
protein.
Length = 1537
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -3
Query: 249 SKPPDPERWLPK-YERTAYRKRRG-IRRDVIKGSQG 148
+ PPD RW+PK +ERT R G RR GS+G
Sbjct: 1492 ASPPDALRWIPKPWERTGPPPREGPSRRAEEPGSRG 1527
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 29.5 bits (63), Expect = 5.9
Identities = 22/103 (21%), Positives = 43/103 (41%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGYQSTSELRTESDEALDV 171
+S ++P + S ++S +++S + +S + P S S + +
Sbjct: 130 SSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSS 189
Query: 170 TSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADP 42
+SS + P PR + +S SP+TS+ S S + P
Sbjct: 190 SSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSP 232
>AK126510-1|BAC86575.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ44546 fis, clone UTERU3006008. ).
Length = 213
Score = 29.5 bits (63), Expect = 5.9
Identities = 24/77 (31%), Positives = 30/77 (38%), Gaps = 4/77 (5%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRT-QTSPNLPIRKGGYQ---STSELRTESDE 183
A+ N +LP SW +AS +NSR Q P LP G + S T S
Sbjct: 99 AAPNPAGDLPGGSWSSPSHPDASLRSNSRANFQLQPLLPPAGGASHRPPTPSIPSTHSPT 158
Query: 182 ALDVTSSRVAKECPPLP 132
R + CPP P
Sbjct: 159 PCGSLQKRPGRLCPPAP 175
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 29.5 bits (63), Expect = 5.9
Identities = 22/103 (21%), Positives = 43/103 (41%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGYQSTSELRTESDEALDV 171
+S ++P + S ++S +++S + +S + P S S + +
Sbjct: 131 SSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSS 190
Query: 170 TSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADP 42
+SS + P PR + +S SP+TS+ S S + P
Sbjct: 191 SSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSSSP 233
>AB044934-1|BAB13698.1| 390|Homo sapiens histamine H4 receptor
protein.
Length = 390
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = -1
Query: 371 SSRRLFKASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNLPIRKGGYQSTSELRTE 192
SSRR AS E+PA RR+R +S +SR S + + G + + +
Sbjct: 233 SSRRSLSAST----EVPASFHSERRRRKSSLMFSSRTKMNSNTIASKMGSFSQSDSVALH 288
Query: 191 SDEALDVTSSR 159
E +++ +R
Sbjct: 289 QREHVELLRAR 299
>Z83844-3|CAI20370.2| 701|Homo sapiens SH3-domain binding protein 1
protein.
Length = 701
Score = 29.1 bits (62), Expect = 7.8
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Frame = -1
Query: 338 NPPELPALSWD--RRRKRNASA--------TANSRRTQTSPNLPIRKGGYQSTSELRTES 189
+PPE A D RR KR A A + SR + +P LP G + L
Sbjct: 550 SPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQAL---- 605
Query: 188 DEALDVTSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALGS 27
L +S R PPLP + R SPA+ + + PG + P +L +
Sbjct: 606 PRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSN 659
>CR456576-1|CAG30462.1| 701|Homo sapiens SH3BP1 protein.
Length = 701
Score = 29.1 bits (62), Expect = 7.8
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Frame = -1
Query: 338 NPPELPALSWD--RRRKRNASA--------TANSRRTQTSPNLPIRKGGYQSTSELRTES 189
+PPE A D RR KR A A + SR + +P LP G + L
Sbjct: 550 SPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQAL---- 605
Query: 188 DEALDVTSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALGS 27
L +S R PPLP + R SPA+ + + PG + P +L +
Sbjct: 606 PRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSN 659
>BX511262-27|CAM45818.1| 356|Homo sapiens HLA-B associated
transcript 4 protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNL 240
A R PP + LSW R+R A R +T NL
Sbjct: 318 AGRERPPRVATLSWREERRREEKDRAWERDLRTYMNL 354
>BC032358-1|AAH32358.1| 418|Homo sapiens Enah/Vasp-like protein.
Length = 418
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = -3
Query: 177 RRDVIKGSQGMSTTATDQYDMSKQQTTPIPGDLCQEXPGSKSSRSESAWQRKQPAEE 7
RR S + D+ M T+P PG P + S W+R E+
Sbjct: 280 RRKAASQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEK 336
>BC023997-1|AAH23997.1| 416|Homo sapiens EVL protein protein.
Length = 416
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = -3
Query: 177 RRDVIKGSQGMSTTATDQYDMSKQQTTPIPGDLCQEXPGSKSSRSESAWQRKQPAEE 7
RR S + D+ M T+P PG P + S W+R E+
Sbjct: 278 RRKAASQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEK 334
>BC008783-1|AAH08783.1| 356|Homo sapiens HLA-B associated
transcript 4 protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNL 240
A R PP + LSW R+R A R +T NL
Sbjct: 318 AGRERPPRVATLSWREERRREEKDRAWERDLRTYMNL 354
>BC008282-1|AAH08282.1| 621|Homo sapiens SH3BP1 protein protein.
Length = 621
Score = 29.1 bits (62), Expect = 7.8
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Frame = -1
Query: 338 NPPELPALSWD--RRRKRNASA--------TANSRRTQTSPNLPIRKGGYQSTSELRTES 189
+PPE A D RR KR A A + SR + +P LP G + L
Sbjct: 470 SPPETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQAL---- 525
Query: 188 DEALDVTSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALGS 27
L +S R PPLP + R SPA+ + + PG + P +L +
Sbjct: 526 PRRLVGSSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSN 579
>BA000025-27|BAB63387.1| 356|Homo sapiens BAT4 protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNL 240
A R PP + LSW R+R A R +T NL
Sbjct: 318 AGRERPPRVATLSWREERRREEKDRAWERDLRTYMNL 354
>AY364241-1|AAQ76800.1| 632|Homo sapiens SH3 domain binding protein
1 protein.
Length = 632
Score = 29.1 bits (62), Expect = 7.8
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Frame = -1
Query: 338 NPPELPALSWDRRRKRNASA----TANSRRTQTSPNLPIRKGGYQSTSELRTESDEALDV 171
+PPE A D R+ + + SR + +P LP G + L L
Sbjct: 487 SPPETAAPVEDMARRTRPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQAL----PRRLVG 542
Query: 170 TSSRVAKECPPLPRINMT*VNSRPRLSPATSAKSXPGRSQADPRALGS 27
+S R PPLP + R SPA+ + + PG + P +L +
Sbjct: 543 SSLRAPTVPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSN 590
>AL805934-29|CAI18515.1| 356|Homo sapiens HLA-B associated
transcript 4 protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNL 240
A R PP + LSW R+R A R +T NL
Sbjct: 318 AGRERPPRVATLSWREERRREEKDRAWERDLRTYMNL 354
>AL670886-20|CAI17792.1| 356|Homo sapiens HLA-B associated
transcript 4 protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNL 240
A R PP + LSW R+R A R +T NL
Sbjct: 318 AGRERPPRVATLSWREERRREEKDRAWERDLRTYMNL 354
>AL662899-4|CAI18385.1| 356|Homo sapiens HLA-B associated
transcript 4 protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNL 240
A R PP + LSW R+R A R +T NL
Sbjct: 318 AGRERPPRVATLSWREERRREEKDRAWERDLRTYMNL 354
>AF131766-1|AAD20040.1| 362|Homo sapiens Similar to Ena-VASP like
protein protein.
Length = 362
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = -3
Query: 177 RRDVIKGSQGMSTTATDQYDMSKQQTTPIPGDLCQEXPGSKSSRSESAWQRKQPAEE 7
RR S + D+ M T+P PG P + S W+R E+
Sbjct: 224 RRKAASQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEK 280
>AF129756-13|AAD18082.1| 356|Homo sapiens BAT4 protein.
Length = 356
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 350 ASRNNPPELPALSWDRRRKRNASATANSRRTQTSPNL 240
A R PP + LSW R+R A R +T NL
Sbjct: 318 AGRERPPRVATLSWREERRREEKDRAWERDLRTYMNL 354
>AF112209-1|AAF17197.1| 416|Homo sapiens Ena-VASP-like protein
protein.
Length = 416
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = -3
Query: 177 RRDVIKGSQGMSTTATDQYDMSKQQTTPIPGDLCQEXPGSKSSRSESAWQRKQPAEE 7
RR S + D+ M T+P PG P + S W+R E+
Sbjct: 278 RRKAASQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEK 334
>AF087843-1|AAP97156.1| 418|Homo sapiens B6 protein.
Length = 418
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = -3
Query: 177 RRDVIKGSQGMSTTATDQYDMSKQQTTPIPGDLCQEXPGSKSSRSESAWQRKQPAEE 7
RR S + D+ M T+P PG P + S W+R E+
Sbjct: 280 RRKAASQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKPWERNNSVEK 336
>AF052504-1|AAF21709.1| 418|Homo sapiens RNB6 protein.
Length = 418
Score = 29.1 bits (62), Expect = 7.8
Identities = 14/57 (24%), Positives = 20/57 (35%)
Frame = -3
Query: 177 RRDVIKGSQGMSTTATDQYDMSKQQTTPIPGDLCQEXPGSKSSRSESAWQRKQPAEE 7
RR S + D+ M T+P PG P + S W+R E+
Sbjct: 280 RRKAASQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSVEK 336
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,444,388
Number of Sequences: 237096
Number of extensions: 1304554
Number of successful extensions: 4281
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 4079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4275
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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