Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV18l11f
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|c... 33 0.049
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 31 0.20
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 30 0.34
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 29 0.46
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 29 0.60
SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr 2... 27 1.8
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 27 2.4
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 26 4.2
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 5.6
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 25 7.4
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 25 9.8
SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr... 25 9.8
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 25 9.8
>SPBC31F10.16 |||ChAPs family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 679
Score = 32.7 bits (71), Expect = 0.049
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Frame = +2
Query: 65 KFCQSSD-YERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAA 241
KF S + Y+ AL A + + +P+E + C +L L +FK AL L +
Sbjct: 313 KFLISKERYDLALICAKRAVHASPSEFATWACLADVYLHLEDFKSALLALNSCPMYTYYE 372
Query: 242 DLLF-----EKAYAQYRLNSPKEALQTVDSAPELTPALKELRAQILYRL 373
+ +A+ + +N PKE L+ ++A E+ L RL
Sbjct: 373 RDAYPLPPSARAHLPFPVNFPKEELEVENNAQNGYTVSTEITDPYLARL 421
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 30.7 bits (66), Expect = 0.20
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +2
Query: 221 KNSALAADL--LFEKAYAQYR-LNSPKEALQTVDSAPELTPALKELRAQILYRLEQ-YQD 388
KN A L L +++Y YR L S AL + APE LK +RL Q Y D
Sbjct: 179 KNECRIAALVPLVQESYGIYRFLTSMLRALYSTVDAPETLEPLKHRYKSQHHRLRQFYAD 238
Query: 389 CYNL 400
C NL
Sbjct: 239 CSNL 242
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 29.9 bits (64), Expect = 0.34
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 68 FCQSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHN 187
FCQ +D ERALK + P++Q+ + + CF L N
Sbjct: 743 FCQQNDIERALK---MVRVHGPDQQELYIMMLNCFASLEN 779
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 29.5 bits (63), Expect = 0.46
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = +2
Query: 350 RAQILYRLEQYQDCYNLYRDLL 415
+AQ+L +LE+YQ+ N+++DL+
Sbjct: 506 KAQVLEQLEKYQESLNIWKDLI 527
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 29.1 bits (62), Expect = 0.60
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 142 ESISLQSGMLSPTPQLQGGSSDINQCQE 225
E++ L +G L P P+ + G SDIN+ +E
Sbjct: 901 EALDLINGFLQPNPERRLGFSDINEIKE 928
>SPBC24C6.09c |||phosphoketolase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 825
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 233 TLSSWHWLMSLEPP*SCGVGESIPLCNEMLSAHLVLSAVFSLQLLKLFHSHCSGKIYLIQ 54
T +SWH L+P S V + L +S + + +LL LF S ++ ++
Sbjct: 224 TATSWHAHKFLDPAESGAVIPVLELNGYKISERTIYGCMDDSELLSLF-SGFGYEVAIVN 282
Query: 53 DKPEQ 39
D P+Q
Sbjct: 283 DTPDQ 287
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 27.1 bits (57), Expect = 2.4
Identities = 22/83 (26%), Positives = 30/83 (36%)
Frame = +2
Query: 362 LYRLEQYQDCYNLYRDLLKNTTDEYEDERKXXXXXXXXXXXXXXPTSELPQFDENTYELA 541
L+R YQD Y Y + L+ D E K P L D N +
Sbjct: 233 LFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSDSD-NALAID 291
Query: 542 YNSGSTLAMRGKYNEALSVLKRA 610
+ L +R K +EAL + A
Sbjct: 292 SSYLKGLKVRAKAHEALEKWEEA 314
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 74 QSSDYERALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNA 220
+S DY A+ A K ++ P KA+ + + + KEA+ A
Sbjct: 51 KSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGDFRKA 99
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 146 LSAHLVLSAVFSLQLLKLFHSHCSGKIYLIQDKPEQGYSPC 24
L+ L++ A L K F S S + + +D E+G+S C
Sbjct: 679 LAGSLLVGAFIQLACRKSFRSPVSAGVPIPKDVDEKGHSKC 719
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 25.4 bits (53), Expect = 7.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 494 PTSELPQFDENTYELAYNSGSTL 562
PT EL Q +ENTY++ S S++
Sbjct: 98 PTVELKQENENTYQIREESTSSV 120
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 95 ALKAAGKILQIAPNEQKAFHCKVVCFLQLHNFKEALATLTNAKNSALAA 241
A++ GKI +A ++ A H K F + H+ + L N +S +A+
Sbjct: 101 AIRGEGKIFVVAEGDKTAIHGKDTLFTK-HSVGDTLLLPNNYGSSHIAS 148
>SPBPB2B2.13 |||galactokinase Gal1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 519
Score = 25.0 bits (52), Expect = 9.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 143 SAHLVLSAVFSLQLLKLFHSH 81
+ H+ A+ LQ+LKLFH H
Sbjct: 384 TVHVYSDAMRVLQVLKLFHQH 404
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/44 (20%), Positives = 24/44 (54%)
Frame = +2
Query: 320 PELTPALKELRAQILYRLEQYQDCYNLYRDLLKNTTDEYEDERK 451
P + ++ +L A +++ YQ CY L+++ + +Y ++ +
Sbjct: 741 PHMKKSISKLLADHQSQVQLYQSCYKLFKNESISMAIKYREQEQ 784
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,551,040
Number of Sequences: 5004
Number of extensions: 49072
Number of successful extensions: 164
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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