Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV18k22r
         (857 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    25   1.2  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    24   2.1  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   2.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.6  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   3.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.6  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   4.8  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 549 LRLKYQVFCHYQPILR-VCIHHFDSNIS 629
           L+LK  +FC Y P +R +  H   +N++
Sbjct: 45  LKLKRYLFCEYDPNVRPISSHQIANNVT 72


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 161 MGSIKELLFKFVRSFIICSISI 226
           MG IK LLF F   F +C + I
Sbjct: 5   MGMIKYLLFIFNFVFAVCGLGI 26


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 251 EEMSSSSDSFTRIAVN 298
           EE ++ +DSFTRIA N
Sbjct: 568 EESNNMTDSFTRIANN 583


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 615 DSNISQYHQFVDNLFYYLTVFRIPKF 692
           DSN S + + VDN   Y+    IP +
Sbjct: 317 DSNSSDFKKLVDNWMTYMPPSGIPNW 342


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = +2

Query: 146 SILFFMG----SIKELLFK-FVRSFIICSISIFLECFCKQ 250
           S+LF++G    +I   ++  F + F     SI  +CFCK+
Sbjct: 45  SVLFWLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKR 84


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
 Frame = +2

Query: 146 SILFFMG----SIKELLFK-FVRSFIICSISIFLECFCKQ 250
           S+LF++G    +I   ++  F + F     SI  +CFCK+
Sbjct: 493 SVLFWLGYCNSAINPCIYALFSKDFRFAFKSIICKCFCKR 532


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 549 KDDAMKKLQERFLKIMNDVADLSDEKHRL 463
           KD+ M  L  R  KI+ND  +  D   R+
Sbjct: 372 KDEYMLVLSNRMQKIVNDDFNFDDVNFRI 400


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 615 DSNISQYHQFVDNLFYYLTVFRIPKF 692
           DSN S + + +DN   Y+    IP +
Sbjct: 317 DSNSSDFKKLIDNWMTYMPPSGIPNW 342


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,941
Number of Sequences: 438
Number of extensions: 4124
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)